Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 2.8e-285 984.6 494 100.0
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 2.2e-128 463.4 437 58.6
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 8.7e-125 451.4 439 55.8
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 2.5e-124 449.9 421 59.1
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 1.8e-122 443.7 523 49.7
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 1.4e-111 407.5 454 51.3
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 6.7e-109 398.7 421 52.7
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 2.2e-104 383.6 452 48.0
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 2.5e-103 380.2 425 48.7
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 3.2e-103 379.8 417 50.8
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 3.3e-100 369.8 436 48.2
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 7.4e-100 368.6 446 47.8
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 9.7e-100 368.2 421 50.1
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 9.7e-100 368.2 430 48.8
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.3e-99 367.9 429 49.0
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.3e-99 367.9 432 47.9
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 2.8e-99 366.7 423 48.2
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 1.8e-98 364.0 460 45.9
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 3.1e-98 363.2 427 48.9
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 1.2e-97 361.3 429 48.0
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.2e-97 361.3 419 49.9
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.3e-93 347.1 433 48.3
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 3.0e-93 346.7 403 48.9
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.0e-93 346.7 421 48.7
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 3.9e-93 346.3 464 44.4
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 6.7e-93 345.5 417 47.0
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 6.7e-93 345.5 439 44.9
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 2.0e-92 344.0 455 44.4
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 4.3e-92 342.8 425 48.0
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 2.2e-91 340.5 418 47.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.7e-91 339.7 432 47.9
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 4.8e-91 339.3 441 45.1
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 6.3e-91 339.0 421 46.8
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 2.4e-90 337.0 451 45.5
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 4.1e-90 336.3 434 46.1
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 6.9e-90 335.5 424 46.9
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 6.9e-90 335.5 418 43.8
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 9.1e-90 335.1 461 43.4
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 1.5e-89 334.3 435 47.1
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.5e-89 334.3 419 47.7
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.5e-89 334.3 419 47.7
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 2.0e-89 334.0 421 47.0
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 2.0e-89 334.0 429 44.3
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 3.4e-89 333.2 442 45.7
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 5.9e-89 332.4 444 45.9
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 7.7e-89 332.0 427 46.1
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 1.0e-88 331.6 425 43.3
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.2e-88 330.5 413 47.2
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 3.8e-88 329.7 414 44.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 6.5e-88 328.9 434 44.0
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.2e-86 324.7 429 44.3
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 2.1e-86 323.9 429 45.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.7e-86 323.6 432 46.3
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 3.6e-86 323.2 419 46.8
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 4.7e-86 322.8 438 44.7
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 1.0e-85 321.6 414 43.0
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 1.8e-85 320.9 431 45.0
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 8.8e-85 318.5 430 42.6
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 7.4e-84 315.5 426 44.1
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 9.7e-84 315.1 419 43.4
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 4.8e-83 312.8 462 41.6
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.4e-82 311.2 421 43.5
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.4e-82 311.2 444 44.1
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.0e-80 305.1 438 44.5
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.1e-79 301.6 427 42.9
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 1.4e-79 301.2 397 44.8
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 3.2e-79 300.1 406 45.3
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 3.2e-79 300.1 423 42.3
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 7.2e-79 298.9 439 40.5
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 7.2e-79 298.9 422 41.9
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 7.2e-79 298.9 450 41.1
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 3.0e-77 293.5 413 45.5
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 7.4e-76 288.9 416 42.5
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 1.4e-74 284.6 448 39.7
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 2.4e-74 283.9 429 42.7
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 4.5e-73 279.6 439 41.5
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 1.0e-72 278.5 439 41.0
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 1.5e-71 274.6 447 39.4
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 4.2e-71 273.1 442 39.8
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 5.2e-69 266.2 421 39.9
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 1.2e-68 265.0 440 38.9
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.7e-67 260.0 265 55.8
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.7e-67 260.0 265 55.8
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 1.2e-65 255.0 434 38.5
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 2.0e-65 254.2 433 40.2
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 4.7e-62 243.0 433 38.3
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 2.3e-61 240.7 245 51.8
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 2.0e-60 237.7 308 44.5
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 1.7e-59 234.6 322 44.7
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 8.3e-59 232.3 439 35.8
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 5.9e-57 226.1 221 50.2
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 9.5e-55 218.8 232 50.4
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 6.1e-54 216.1 247 51.4
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 7.5e-52 209.1 314 40.1
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.4e-50 204.1 447 33.8
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 1.7e-48 198.0 316 43.4
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.3e-45 187.6 171 52.0
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.4e-44 183.3 158 53.2
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 8.3e-43 179.1 164 53.7
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 1.9e-39 167.9 172 54.7
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 4.3e-39 166.8 421 29.9
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 3.6e-38 163.7 157 51.0
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 4.0e-37 160.2 289 34.6
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 5.2e-37 159.8 155 58.7
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 8.9e-37 159.1 155 58.7
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.2e-36 158.7 263 41.8
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 7.5e-36 156.0 156 55.1
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 1.7e-35 154.8 295 36.6
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 2.2e-35 154.5 129 57.4
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 3.7e-35 153.7 410 31.0
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 4.1e-34 150.2 131 53.4
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 5.4e-34 149.8 155 52.3
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 5.4e-34 149.8 473 29.2
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 7.0e-34 149.4 157 53.5
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 9.2e-34 149.1 189 48.1
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 1.3e-32 145.2 229 39.3
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 5.1e-32 143.3 148 47.3
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 8.6e-32 142.5 153 51.0
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.1e-29 135.6 140 55.7
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 1.8e-29 134.8 144 51.4
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 6.4e-27 126.3 291 37.5
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 1.0e-24 119.0 126 50.0
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 3.9e-24 117.1 344 32.8
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 9.5e-23 112.5 116 51.7
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 7.6e-20 102.8 136 33.8
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.3e-19 102.1 129 34.9
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 2.4e-18 97.8 144 43.8
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 9.2e-18 95.9 209 35.4
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 7.3e-15 86.3 101 45.5
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 6.9e-13 79.7 136 40.4
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 9.9e-12 75.9 190 30.5
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 2.9e-11 74.3 238 28.2
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 5.6e-07 60.1 76 51.3
Sabra15G0117400 Salix brachista HOM05D005804 ORTHO05D006849 2.1e-06 58.2 108 38.0


User provided reference genes

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