Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 4.6e-126 454.5 224 100.0
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.1e-98 363.6 224 79.0
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.1e-98 360.5 224 77.7
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.1e-98 360.5 224 77.7
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 2.7e-97 359.0 224 78.1
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 3.5e-97 358.6 231 77.5
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 4.5e-97 358.2 225 77.8
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 4.5e-97 358.2 224 77.2
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 7.7e-97 357.5 224 76.8
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.0e-96 357.1 224 77.2
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.0e-96 357.1 224 77.2
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.9e-96 355.5 224 78.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 3.8e-96 355.1 224 78.1
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 3.8e-96 355.1 224 76.3
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 8.5e-96 354.0 224 75.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 8.5e-96 354.0 225 76.4
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 3.2e-95 352.1 224 76.3
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 4.2e-95 351.7 224 76.3
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 5.5e-95 351.3 227 77.1
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 7.2e-95 350.9 224 75.9
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 9.4e-95 350.5 224 75.4
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 1.2e-94 350.1 224 75.4
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 1.6e-94 349.7 224 74.6
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 2.1e-94 349.4 224 77.2
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.7e-94 349.0 214 80.8
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 6.1e-94 347.8 227 78.4
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.0e-93 347.1 228 77.2
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.4e-93 346.7 226 77.4
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 2.3e-93 345.9 226 75.7
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.0e-93 345.5 228 75.4
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 4.0e-93 345.1 228 74.1
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 4.0e-93 345.1 226 76.5
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 6.8e-93 344.4 225 75.6
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 8.8e-93 344.0 224 76.8
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.2e-92 343.6 225 75.6
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.5e-92 343.2 226 74.3
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 1.5e-92 343.2 226 76.5
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 5.7e-92 341.3 214 79.4
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 5.7e-92 341.3 224 74.6
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 7.5e-92 340.9 224 75.0
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 7.5e-92 340.9 222 75.7
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.3e-91 340.1 224 75.0
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.7e-91 339.7 226 74.8
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 3.7e-91 338.6 224 73.2
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 3.7e-91 338.6 226 73.9
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 4.9e-91 338.2 226 73.0
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 4.9e-91 338.2 226 73.0
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 6.3e-91 337.8 228 74.1
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 6.3e-91 337.8 223 74.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 8.3e-91 337.4 223 74.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 8.3e-91 337.4 223 74.0
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.1e-90 337.0 223 74.0
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.1e-90 337.0 223 74.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.1e-90 337.0 223 74.0
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.4e-90 336.7 224 72.8
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.8e-90 336.3 224 74.6
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 3.1e-90 335.5 223 74.0
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 3.1e-90 335.5 250 69.2
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 4.1e-90 335.1 229 72.5
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 5.4e-90 334.7 228 73.7
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 5.4e-90 334.7 223 73.5
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 7.0e-90 334.3 224 73.7
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 7.0e-90 334.3 225 72.9
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 3.5e-89 332.0 226 73.0
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 3.5e-89 332.0 232 71.1
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 7.7e-89 330.9 225 73.3
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 7.7e-89 330.9 226 72.1
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.0e-88 330.5 224 74.1
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 2.3e-88 329.3 226 72.1
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.5e-87 326.6 237 69.2
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 2.5e-87 325.9 227 72.2
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 3.3e-87 325.5 214 76.6
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 3.3e-87 325.5 209 77.5
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 9.5e-87 323.9 209 73.2
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.6e-86 323.2 232 70.7
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 2.8e-86 322.4 207 75.4
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 3.6e-86 322.0 260 63.5
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-86 321.6 245 66.5
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 8.0e-86 320.9 232 68.1
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 2.3e-85 319.3 244 68.0
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 5.2e-85 318.2 229 69.9
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.2e-84 317.0 228 69.7
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 2.0e-84 316.2 231 69.3
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 4.9e-83 311.6 233 67.0
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 7.0e-82 307.8 207 71.5
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.0e-81 306.2 229 69.0
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 1.1e-79 300.4 224 68.8
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.5e-79 300.1 224 67.9
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 7.3e-79 297.7 211 70.6
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.2e-78 297.0 222 67.1
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 2.8e-78 295.8 238 65.1
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.7e-75 285.4 228 64.9
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 6.4e-75 284.6 242 62.0
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.9e-74 283.1 207 70.5
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 3.2e-74 282.3 211 68.7
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 4.3e-71 271.9 152 84.9
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 8.1e-70 267.7 175 74.3
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.7e-67 260.0 186 68.8
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 2.2e-67 259.6 226 60.6
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.2e-67 259.6 175 68.6
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 8.3e-67 257.7 235 58.7
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.0e-65 251.5 222 61.3
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 7.8e-65 251.1 226 58.8
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.6e-62 242.3 144 77.1
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 3.4e-60 235.7 329 44.4
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 4.4e-60 235.3 226 55.8
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.1e-58 230.7 155 71.0
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 1.2e-57 227.3 144 78.5
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 7.8e-57 224.6 170 60.0
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.7e-56 223.4 123 86.2
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 8.4e-51 204.5 152 62.5
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 8.4e-43 177.9 175 51.4
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 2.3e-40 169.9 210 45.7
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 9.6e-39 164.5 159 50.3
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 7.6e-28 128.3 63 92.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 9.3e-26 121.3 63 81.0
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 9.6e-23 111.3 86 60.5
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.8e-22 109.0 68 79.4
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 6.3e-22 108.6 89 60.7
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.2e-20 104.4 121 50.4
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 3.4e-20 102.8 163 40.5


User provided reference genes

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