Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 2.6e-58 228.4 108 100.0
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 5.8e-50 200.7 108 85.2
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 2.9e-49 198.4 108 85.2
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 2.9e-49 198.4 108 80.6
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 1.4e-48 196.1 103 83.5
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 1.4e-48 196.1 108 80.6
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 1.9e-48 195.7 108 84.3
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 1.9e-48 195.7 108 79.6
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 2.4e-48 195.3 103 84.5
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 4.2e-48 194.5 108 82.4
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 5.5e-48 194.1 108 84.3
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 5.5e-48 194.1 107 81.3
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 9.3e-48 193.4 108 81.5
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.1e-47 192.2 108 82.4
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 2.1e-47 192.2 108 81.5
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.7e-47 191.8 108 81.5
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 2.7e-47 191.8 108 79.6
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 6.0e-47 190.7 108 83.3
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 6.0e-47 190.7 104 85.6
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 6.0e-47 190.7 108 83.3
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 6.0e-47 190.7 108 80.6
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 7.9e-47 190.3 107 79.4
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 1.0e-46 189.9 108 78.7
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 1.0e-46 189.9 107 83.2
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 1.3e-46 189.5 108 80.6
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 1.3e-46 189.5 108 80.6
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 1.8e-46 189.1 103 82.5
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 1.8e-46 189.1 103 82.5
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 3.0e-46 188.3 105 83.8
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 3.0e-46 188.3 108 80.6
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 3.0e-46 188.3 108 80.6
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 3.9e-46 188.0 108 78.7
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 3.9e-46 188.0 102 80.4
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 3.9e-46 188.0 102 80.4
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 78.7
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 78.7
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 8.7e-46 186.8 101 82.2
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 8.7e-46 186.8 108 78.7
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 1.1e-45 186.4 103 79.6
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 1.5e-45 186.0 108 77.8
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 1.5e-45 186.0 108 81.5
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 1.9e-45 185.7 108 78.7
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 1.9e-45 185.7 108 78.7
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 1.9e-45 185.7 103 79.6
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 1.9e-45 185.7 107 80.4
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 2.5e-45 185.3 101 81.2
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 2.5e-45 185.3 108 76.9
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 3.3e-45 184.9 107 79.4
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 3.3e-45 184.9 108 80.6
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 4.3e-45 184.5 109 80.7
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 4.3e-45 184.5 101 79.2
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 5.6e-45 184.1 108 77.8
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 7.4e-45 183.7 105 81.0
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 9.6e-45 183.3 108 80.6
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 1.3e-44 183.0 108 80.6
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 1.6e-44 182.6 108 78.7
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 1.6e-44 182.6 108 78.7
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 1.6e-44 182.6 108 79.6
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 1.6e-44 182.6 100 83.0
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 1.6e-44 182.6 108 79.6
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 1.6e-44 182.6 108 80.6
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 2.1e-44 182.2 108 78.7
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 2.1e-44 182.2 101 81.2
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 2.1e-44 182.2 108 79.6
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 2.1e-44 182.2 108 76.9
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 78.7
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 79.6
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 78.7
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 78.7
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 79.6
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 79.6
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 2.8e-44 181.8 100 78.0
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 78.7
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 3.7e-44 181.4 108 78.7
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 3.7e-44 181.4 104 75.0
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 3.7e-44 181.4 104 75.0
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 3.7e-44 181.4 108 78.7
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 3.7e-44 181.4 106 77.4
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 3.7e-44 181.4 108 75.9
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 3.7e-44 181.4 107 75.7
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 3.7e-44 181.4 103 81.6
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 4.8e-44 181.0 97 80.4
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 4.8e-44 181.0 105 77.1
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 6.2e-44 180.6 108 78.7
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 6.2e-44 180.6 108 78.7
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 8.2e-44 180.3 96 80.2
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 1.1e-43 179.9 107 78.5
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 1.1e-43 179.9 108 77.8
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 1.4e-43 179.5 108 77.8
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 1.4e-43 179.5 108 79.6
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 1.4e-43 179.5 102 79.4
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 2.4e-43 178.7 96 83.3
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 3.1e-43 178.3 108 76.9
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 3.1e-43 178.3 97 79.4
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 5.3e-43 177.6 108 78.7
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 5.3e-43 177.6 108 78.7
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 5.3e-43 177.6 107 78.5
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 5.3e-43 177.6 97 77.3
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 9.0e-43 176.8 97 81.4
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 9.0e-43 176.8 103 73.8
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 1.2e-42 176.4 108 77.8
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 1.2e-42 176.4 108 77.8
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 1.2e-42 176.4 108 77.8
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 1.2e-42 176.4 97 80.4
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 1.2e-42 176.4 96 81.2
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 1.2e-42 176.4 96 81.2
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 1.2e-42 176.4 108 75.9
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 1.2e-42 176.4 97 81.4
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 1.5e-42 176.0 108 77.8
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 1.5e-42 176.0 103 79.6
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 2.0e-42 175.6 108 76.9
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 2.6e-42 175.3 97 80.4
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 2.6e-42 175.3 101 81.2
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 3.4e-42 174.9 102 79.4
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 4.5e-42 174.5 93 82.8
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 4.5e-42 174.5 108 74.1
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 4.5e-42 174.5 108 74.1
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 4.5e-42 174.5 108 74.1
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 4.5e-42 174.5 108 74.1
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 4.5e-42 174.5 108 74.1
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 1.0e-41 173.3 100 78.0
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 1.0e-41 173.3 105 75.2
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 1.7e-41 172.6 97 78.4
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 1.7e-41 172.6 105 74.3
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 2.2e-41 172.2 101 77.2
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 2.9e-41 171.8 101 79.2
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 2.9e-41 171.8 106 74.5
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 3.8e-41 171.4 105 74.3
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 4.9e-41 171.0 97 78.4
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 9.3e-40 166.8 99 75.8
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.2e-39 166.4 98 75.5
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 1.2e-39 166.4 98 75.5
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 3.7e-36 154.8 83 78.3
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 6.9e-35 150.6 94 71.3
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 2.2e-33 145.6 79 84.8
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 1.6e-31 139.4 85 74.1
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 8.8e-30 133.7 68 83.8
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 2.2e-28 129.0 93 65.6
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 3.7e-28 128.3 93 65.6
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 9.1e-27 123.6 74 77.0
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 4.5e-26 121.3 84 66.7
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 1.3e-25 119.8 74 70.3
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 8.5e-25 117.1 88 59.1
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 1.4e-24 116.3 72 72.2
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 5.5e-24 114.4 69 76.8
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 1.0e-22 110.2 66 74.2
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 6.7e-22 107.5 81 55.6
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 4.4e-21 104.8 90 55.6
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 7.4e-21 104.0 101 53.5
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 8.2e-20 100.5 60 73.3
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 8.5e-17 90.5 79 51.9
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 4.7e-15 84.7 77 57.1
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 4.4e-13 78.2 47 76.6
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 2.4e-11 72.4 54 61.1
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 5.9e-10 67.8 84 40.5
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 8.5e-09 63.9 37 81.1
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.1e-08 63.5 61 57.4
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 5.5e-08 61.2 30 90.0


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