Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 4.9e-252 874.0 445 100.0
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 5.3e-166 588.2 410 72.0
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 1.9e-163 579.7 426 68.5
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.8e-156 555.4 429 65.7
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.3e-148 529.6 429 62.5
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 3.7e-143 512.3 431 59.2
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 5.4e-142 508.4 409 60.6
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 8.6e-140 501.1 416 62.5
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 1.4e-137 493.8 417 61.6
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.2e-136 490.7 427 59.7
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 2.0e-136 490.0 450 57.3
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 2.6e-136 489.6 422 60.4
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 8.3e-135 484.6 427 58.8
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.9e-134 483.4 425 59.1
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 1.6e-133 480.3 403 60.5
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.1e-133 479.9 432 57.9
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 2.7e-133 479.6 416 59.6
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.7e-133 479.6 402 60.4
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 4.6e-133 478.8 436 57.6
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 4.6e-133 478.8 378 64.8
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 7.8e-133 478.0 405 59.8
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 7.8e-133 478.0 442 56.3
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 3.9e-132 475.7 410 59.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.9e-132 475.7 402 59.7
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 8.6e-132 474.6 419 58.2
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.9e-131 473.4 442 56.8
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 3.3e-131 472.6 444 56.1
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 7.3e-131 471.5 409 58.7
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 9.5e-131 471.1 410 59.0
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.2e-130 470.7 409 58.7
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 1.2e-130 470.7 402 59.7
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.2e-130 470.7 407 58.5
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.6e-130 470.3 405 59.3
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.8e-130 469.5 408 58.3
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-129 467.6 435 56.8
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.4e-129 467.2 441 56.2
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.8e-129 466.8 379 61.5
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 2.3e-129 466.5 409 58.4
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 8.9e-129 464.5 405 58.5
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.5e-128 463.8 438 55.9
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 2.0e-128 463.4 420 56.9
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.0e-128 463.4 410 58.3
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.7e-127 460.3 415 57.1
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 2.2e-127 459.9 417 57.6
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 8.3e-127 458.0 423 57.7
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 4.1e-126 455.7 402 58.0
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.6e-125 452.2 352 64.8
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 4.6e-125 452.2 380 58.9
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 6.0e-125 451.8 376 60.1
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.0e-124 451.1 376 59.3
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.7e-124 450.3 404 56.4
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.9e-123 446.8 402 58.2
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 2.5e-123 446.4 380 58.7
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 5.6e-123 445.3 380 58.7
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 4.4e-120 435.6 438 52.7
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 5.8e-120 435.3 405 56.8
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 3.8e-119 432.6 374 60.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.4e-118 429.9 414 54.6
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 3.2e-118 429.5 348 60.9
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.3e-116 423.3 410 54.4
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 4.3e-115 419.1 412 53.6
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 5.6e-115 418.7 390 55.9
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 5.3e-113 412.1 409 53.5
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.6e-112 409.8 412 52.2
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 3.4e-112 409.5 414 52.9
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 9.9e-112 407.9 412 51.7
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.2e-111 406.8 408 52.9
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 2.9e-111 406.4 412 52.4
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 2.9e-111 406.4 412 52.4
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 4.9e-111 405.6 412 51.7
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 4.9e-111 405.6 413 52.1
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 8.4e-111 404.8 407 52.3
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 4.2e-110 402.5 398 54.5
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 9.3e-110 401.4 384 52.3
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.2e-104 384.4 344 59.3
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.6e-104 383.3 355 56.9
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 3.8e-103 379.4 416 49.5
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.1e-97 361.3 338 55.3
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.2e-94 349.4 385 48.3
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.6e-93 347.4 385 48.1
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.5e-83 313.5 417 42.0
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 1.3e-82 311.2 285 55.1
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 9.0e-81 305.1 323 50.2
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.7e-79 300.8 264 58.3
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 6.1e-77 292.4 369 41.7
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.7e-75 285.0 383 42.0
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 3.7e-74 283.1 392 40.6
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 6.7e-68 262.3 428 37.1
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.7e-63 247.7 306 45.8
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.4e-60 238.0 307 43.6
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.3e-58 231.5 249 51.0
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 2.6e-56 223.8 406 34.5
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 3.4e-51 206.8 398 35.4
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 1.4e-44 184.9 590 25.8
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 2.0e-40 171.0 257 39.7
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.8e-39 166.8 116 69.0
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 7.5e-35 152.5 248 34.7
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.4e-33 148.3 129 54.3
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.8e-33 147.9 131 56.5
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 9.2e-25 119.0 135 48.1
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.2e-24 118.6 84 73.8
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.5e-24 117.1 78 73.1
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 8.6e-23 112.5 119 50.4
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 8.1e-21 105.9 77 68.8
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 8.9e-20 102.4 80 63.8
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 5.4e-17 93.2 364 25.0
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 5.1e-15 86.7 82 50.0
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 4.4e-11 73.6 98 40.8
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.4e-11 73.6 61 60.7
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.7e-10 71.6 45 80.0
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 5.4e-09 66.6 37 86.5
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 9.2e-09 65.9 43 72.1
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 2.3e-07 61.2 65 52.3


User provided reference genes

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