Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 1.7e-154 549.3 272 100.0
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 5.2e-87 325.1 238 69.3
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 1.5e-86 323.6 244 67.2
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 2.0e-86 323.2 258 66.3
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 2.6e-86 322.8 261 62.8
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 2.6e-86 322.8 258 66.3
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 7.5e-86 321.2 250 64.4
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.3e-85 320.5 238 68.9
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 4.8e-85 318.5 203 76.8
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 8.2e-85 317.8 253 64.4
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 1.1e-84 317.4 205 75.6
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 1.4e-84 317.0 182 81.9
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 1.4e-84 317.0 263 61.6
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.1e-84 315.8 208 74.5
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 9.1e-84 314.3 182 80.8
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 1.2e-83 313.9 206 74.8
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 1.2e-83 313.9 257 62.3
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 2.0e-83 313.2 208 73.6
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 2.0e-83 313.2 209 73.7
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 2.7e-83 312.8 184 80.4
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 2.7e-83 312.8 206 74.8
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 3.5e-83 312.4 216 70.8
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 4.5e-83 312.0 275 61.1
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 7.7e-83 311.2 256 65.2
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 1.0e-82 310.8 258 62.8
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 1.3e-82 310.5 253 65.2
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.3e-82 310.5 253 65.2
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.3e-82 310.5 206 74.3
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 1.3e-82 310.5 258 62.0
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 1.7e-82 310.1 178 82.0
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 3.8e-82 308.9 212 71.7
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 3.8e-82 308.9 206 72.8
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 5.0e-82 308.5 253 63.2
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 6.5e-82 308.1 270 60.0
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 8.5e-82 307.8 203 74.4
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.1e-81 307.4 270 60.0
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 1.5e-81 307.0 253 63.2
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 2.5e-81 306.2 266 64.3
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 2.5e-81 306.2 205 73.7
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 2.5e-81 306.2 183 79.2
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.2e-81 305.8 270 60.0
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 4.2e-81 305.4 178 81.5
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 7.2e-81 304.7 266 60.9
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 9.4e-81 304.3 277 61.0
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 9.4e-81 304.3 261 62.5
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 9.4e-81 304.3 207 71.5
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 9.4e-81 304.3 206 72.8
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 9.4e-81 304.3 182 79.1
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 1.2e-80 303.9 205 67.3
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 1.2e-80 303.9 243 63.0
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 1.6e-80 303.5 259 63.3
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 1.6e-80 303.5 204 73.0
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.1e-80 303.1 253 63.6
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 2.7e-80 302.8 185 76.8
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 3.6e-80 302.4 253 63.2
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 4.7e-80 302.0 174 82.2
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 6.1e-80 301.6 232 65.9
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 8.0e-80 301.2 173 82.7
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 8.0e-80 301.2 235 67.2
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 1.0e-79 300.8 216 68.5
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.0e-79 300.8 205 71.7
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 1.8e-79 300.1 216 69.0
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 3.0e-79 299.3 209 68.9
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 8.8e-79 297.7 246 61.8
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 1.2e-78 297.4 264 62.5
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 1.5e-78 297.0 225 68.9
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 2.6e-78 296.2 184 74.5
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 3.4e-78 295.8 212 69.8
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 4.4e-78 295.4 214 67.8
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 4.8e-77 292.0 214 67.3
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 4.8e-77 292.0 214 67.3
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 6.3e-77 291.6 216 66.2
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 8.3e-77 291.2 194 71.6
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 8.3e-77 291.2 190 74.2
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 8.3e-77 291.2 199 72.4
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 1.1e-76 290.8 214 67.3
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 1.1e-76 290.8 214 67.3
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 3.1e-76 289.3 199 71.9
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 4.1e-76 288.9 227 64.8
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 5.4e-76 288.5 199 71.9
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 7.0e-76 288.1 261 59.0
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 1.6e-75 287.0 190 73.2
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 2.7e-75 286.2 177 76.3
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 2.7e-75 286.2 208 67.8
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 2.2e-74 283.1 238 59.2
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 1.1e-73 280.8 183 73.8
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 1.5e-73 280.4 162 78.4
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 3.2e-73 279.3 226 64.6
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 8.0e-72 274.6 176 76.1
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 1.0e-71 274.2 214 66.4
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 1.5e-70 270.4 189 68.3
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 3.4e-70 269.2 200 67.0
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 1.7e-69 266.9 161 76.4
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 5.4e-68 261.9 183 68.3
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 1.6e-67 260.4 149 79.9
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 4.5e-67 258.8 174 71.3
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 1.0e-66 257.7 195 67.2
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 6.6e-66 255.0 268 54.9
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 5.2e-63 245.4 174 69.0
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 6.8e-63 245.0 178 67.4
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 3.5e-59 232.6 206 56.3
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 8.9e-55 218.0 187 56.1
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 8.9e-55 218.0 171 63.7
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 3.4e-54 216.1 122 78.7
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 3.5e-51 206.1 187 53.5
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 1.6e-48 197.2 236 44.1
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.6e-48 197.2 179 54.2
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 9.9e-38 161.4 96 76.0
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 7.3e-33 145.2 144 58.3
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 1.4e-28 131.0 160 50.0
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 7.3e-25 118.6 166 48.8
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 1.5e-22 110.9 171 38.0
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 1.3e-21 107.8 201 36.3
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.1e-20 104.8 112 54.5
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 5.6e-17 92.4 62 64.5
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 4.8e-16 89.4 133 50.4
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 1.1e-15 88.2 85 62.4
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 1.8e-15 87.4 125 49.6
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 2.4e-15 87.0 85 61.2
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 5.3e-15 85.9 85 61.2
arahy.Tifrunner.gnm1.ann1.XS5A0Y Arachis hypogaea HOM05D006376 ORTHO05D008046 2.3e-10 70.5 73 60.3
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 5.1e-10 69.3 81 50.6
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.1e-09 68.2 73 53.4
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 1.9e-09 67.4 47 70.2


User provided reference genes

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