Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 5.1e-165 584.3 295 100.0
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 2.2e-144 515.8 299 85.6
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 3.9e-141 505.0 299 86.0
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 2.0e-140 502.7 301 83.1
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.1e-138 495.4 306 80.7
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 5.3e-138 494.6 299 82.9
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 9.1e-138 493.8 291 85.2
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 9.1e-138 493.8 310 80.0
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 9.1e-138 493.8 282 85.8
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.0e-137 492.7 303 82.2
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 4.5e-137 491.5 297 82.5
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 4.5e-137 491.5 293 85.3
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 7.7e-137 490.7 297 82.5
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 7.7e-137 490.7 302 82.5
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.0e-136 490.3 306 81.0
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.0e-136 490.3 294 82.0
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 1.7e-136 489.6 306 80.7
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 2.9e-136 488.8 296 82.8
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 3.8e-136 488.4 305 82.0
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 5.0e-136 488.0 294 84.0
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 5.0e-136 488.0 298 81.9
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 6.5e-136 487.6 295 85.4
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 1.5e-135 486.5 294 81.3
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.9e-135 486.1 294 81.6
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.9e-135 486.1 299 82.9
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 2.5e-135 485.7 295 83.7
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.2e-135 485.0 297 84.5
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 4.2e-135 485.0 294 80.3
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 5.5e-135 484.6 294 81.0
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 7.2e-135 484.2 294 83.0
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.2e-134 483.4 281 85.1
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 2.1e-134 482.6 295 83.7
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 2.1e-134 482.6 296 82.1
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 2.7e-134 482.3 302 79.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.1e-134 481.1 280 85.0
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 6.1e-134 481.1 296 82.1
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 8.0e-134 480.7 294 79.9
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.0e-133 480.3 299 80.3
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.0e-133 480.3 304 81.2
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.4e-133 479.9 299 80.9
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 1.8e-133 479.6 287 81.2
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 4.0e-133 478.4 293 80.9
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 4.0e-133 478.4 280 82.5
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 5.2e-133 478.0 280 84.6
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 6.7e-133 477.6 298 79.5
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 8.8e-133 477.2 278 82.7
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 8.8e-133 477.2 278 82.7
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 8.8e-133 477.2 278 82.7
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 8.8e-133 477.2 294 79.3
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 1.2e-132 476.9 297 80.1
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 1.2e-132 476.9 301 78.7
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 1.5e-132 476.5 294 79.9
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.5e-132 476.5 296 80.7
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.5e-132 476.5 296 78.4
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 2.0e-132 476.1 280 82.1
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 2.0e-132 476.1 298 80.2
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 3.3e-132 475.3 294 78.9
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 3.3e-132 475.3 297 80.8
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.3e-132 475.3 279 84.2
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 5.7e-132 474.6 297 80.8
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 1.3e-131 473.4 296 79.7
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 1.7e-131 473.0 296 81.1
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 2.2e-131 472.6 296 80.1
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.8e-131 472.2 301 80.1
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 2.8e-131 472.2 294 80.3
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 2.8e-131 472.2 282 81.9
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 2.8e-131 472.2 290 80.3
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 6.3e-131 471.1 294 78.6
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 6.3e-131 471.1 306 77.8
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 1.1e-130 470.3 290 81.0
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 3.1e-130 468.8 294 78.9
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 3.1e-130 468.8 302 78.5
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 4.1e-130 468.4 296 80.4
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 7.0e-130 467.6 280 81.1
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 9.1e-130 467.2 284 82.4
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 9.1e-130 467.2 294 78.9
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.6e-129 466.5 288 78.5
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.6e-129 466.5 292 81.8
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 2.7e-129 465.7 282 81.6
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 3.5e-129 465.3 280 80.7
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 3.5e-129 465.3 281 80.8
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 4.5e-129 464.9 298 78.2
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 5.9e-129 464.5 306 75.8
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 7.7e-129 464.2 282 80.9
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 7.7e-129 464.2 280 81.1
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.3e-128 463.4 298 77.5
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.7e-128 463.0 284 80.6
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 2.9e-128 462.2 295 76.3
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 5.0e-128 461.5 290 80.0
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 8.5e-128 460.7 276 80.4
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 8.5e-128 460.7 287 80.5
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 8.5e-128 460.7 289 79.9
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.1e-127 460.3 295 78.6
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.5e-127 459.9 282 79.8
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.5e-127 459.1 298 77.9
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 3.2e-127 458.8 289 79.6
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 7.2e-127 457.6 284 80.6
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 9.4e-127 457.2 298 77.5
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 1.6e-126 456.4 266 84.6
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.6e-126 456.4 299 78.9
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 1.6e-126 456.4 287 80.8
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.6e-126 455.3 282 79.1
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 6.1e-126 454.5 294 77.2
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.0e-125 452.2 282 80.5
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 6.8e-125 451.1 281 80.8
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 1.2e-124 450.3 284 79.9
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 5.7e-124 448.0 298 76.2
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 6.3e-123 444.5 326 71.8
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 6.3e-123 444.5 298 75.8
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 8.3e-123 444.1 285 77.9
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.1e-122 443.7 272 81.6
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 1.8e-122 443.0 301 77.1
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 5.4e-122 441.4 387 63.0
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 9.1e-122 440.7 290 75.9
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 2.0e-121 439.5 313 73.2
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 1.3e-120 436.8 324 69.8
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 2.9e-120 435.6 295 72.9
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.1e-119 433.7 289 74.4
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 3.3e-119 432.2 284 77.5
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 8.0e-118 427.6 266 79.7
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 4.5e-113 411.8 251 80.5
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 2.9e-112 409.1 288 72.2
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 8.6e-112 407.5 255 80.4
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 4.3e-111 405.2 261 78.5
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 6.1e-110 401.4 280 74.3
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.0e-109 400.6 221 88.2
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 2.0e-108 396.4 221 86.9
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 4.6e-105 385.2 278 66.9
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.9e-104 382.1 218 85.3
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.9e-104 382.1 218 85.3
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 3.3e-103 379.0 250 73.2
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 9.5e-103 377.5 252 71.0
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.1e-101 374.0 307 66.4
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 3.4e-100 369.0 253 71.1
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.1e-98 364.0 200 87.5
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 2.3e-96 356.3 258 67.4
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.1e-93 347.4 220 76.8
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 6.8e-93 344.7 213 80.8
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 5.1e-88 328.6 182 88.5
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 3.3e-87 325.9 182 85.7
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 3.3e-87 325.9 208 79.3
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 1.1e-79 300.8 174 84.5
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 3.4e-76 289.3 221 72.9
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 4.2e-74 282.3 190 75.3
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.7e-72 276.9 152 90.1
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.1e-62 243.4 194 63.9
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 2.8e-62 243.0 146 80.8
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 7.1e-58 228.4 208 61.1
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 1.3e-48 197.6 119 77.3
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.2e-44 184.5 238 47.1
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 1.5e-44 184.1 158 62.0
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 7.7e-44 181.8 136 69.9
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 1.1e-42 177.9 177 57.1
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.6e-41 174.1 105 78.1
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 7.7e-36 155.2 95 76.8
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 3.6e-33 146.4 86 80.2
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 1.1e-29 134.8 304 33.2
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 4.1e-29 132.9 209 43.5
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 4.5e-28 129.4 93 72.0
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.8e-27 126.3 83 74.7
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 3.8e-27 126.3 171 43.3
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 3.3e-23 113.2 65 83.1
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 3.3e-23 113.2 65 83.1
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 5.2e-16 89.4 158 39.9
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 2.2e-14 84.0 53 77.4
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-14 83.6 85 52.9
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.1e-13 81.6 62 64.5
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.1e-13 81.6 62 64.5
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 1.8e-13 80.9 79 65.8
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 2.7e-12 77.0 62 61.3
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 3.5e-12 76.6 92 47.8
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 3.8e-11 73.2 79 53.2
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 1.5e-10 71.2 103 41.7
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 9.4e-10 68.6 110 39.1
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.6e-09 66.6 47 70.2
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 2.3e-08 63.9 47 70.2
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 9.8e-07 58.5 42 71.4
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 9.8e-07 58.5 76 46.1


User provided reference genes

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