Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 0.0e+00 1350.1 658 100.0
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 0.0e+00 1289.6 658 96.0
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 8.1e-187 657.9 719 50.9
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.2e-185 654.1 706 51.4
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 9.3e-183 644.4 677 53.5
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 1.5e-180 637.1 702 50.1
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 1.5e-180 637.1 680 51.8
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 2.1e-179 633.3 677 52.0
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 6.2e-179 631.7 680 51.2
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 1.4e-178 630.6 681 52.7
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 7.9e-174 614.8 683 52.3
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 2.3e-173 613.2 705 48.9
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 5.7e-172 608.6 688 50.3
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 9.6e-172 607.8 682 50.3
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 2.8e-171 606.3 690 49.7
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 3.7e-171 605.9 678 50.3
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 6.3e-171 605.1 675 49.8
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 3.1e-170 602.8 680 50.3
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 9.0e-170 601.3 684 50.7
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 9.0e-170 601.3 684 50.6
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 1.2e-169 600.9 688 49.9
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 2.0e-169 600.1 681 49.6
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 2.6e-169 599.7 683 51.1
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 2.2e-168 596.7 680 49.3
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 2.9e-168 596.3 687 48.9
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.4e-167 594.0 691 48.2
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 1.4e-167 594.0 679 50.2
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 4.2e-167 592.4 681 49.8
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 9.3e-167 591.3 679 49.9
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 9.3e-167 591.3 688 48.1
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 1.2e-166 590.9 680 49.4
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 2.7e-166 589.7 677 48.3
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 4.6e-166 589.0 669 50.1
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 4.6e-166 589.0 680 49.9
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.0e-165 587.8 657 49.9
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 2.3e-165 586.6 678 48.8
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.9e-165 585.9 689 49.3
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 8.7e-165 584.7 689 49.2
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 8.7e-165 584.7 691 48.3
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 8.7e-165 584.7 678 49.9
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 1.1e-164 584.3 685 48.8
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.9e-164 583.6 684 49.6
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 5.7e-164 582.0 678 48.4
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 9.7e-164 581.3 697 47.9
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 9.7e-164 581.3 667 49.6
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.3e-163 580.9 684 48.5
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 2.2e-163 580.1 670 48.7
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.8e-163 579.7 683 48.8
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.8e-163 579.7 610 53.6
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 4.8e-163 578.9 682 48.5
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.3e-163 578.6 683 49.2
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 8.2e-163 578.2 693 47.9
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 4.1e-162 575.9 696 47.1
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 4.5e-161 572.4 681 47.9
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 5.9e-161 572.0 688 48.0
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 5.0e-160 568.9 687 48.5
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.5e-160 568.5 683 48.0
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 6.5e-160 568.5 685 47.9
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 8.5e-160 568.2 695 47.2
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.4e-159 567.4 688 47.7
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.9e-159 567.0 684 46.8
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 5.5e-159 565.5 680 47.6
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 5.5e-159 565.5 697 47.2
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 9.4e-159 564.7 679 47.9
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.2e-158 564.3 685 47.7
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 1.6e-158 563.9 693 48.1
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 1.6e-158 563.9 695 47.3
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 3.6e-158 562.8 692 48.1
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 4.6e-158 562.4 696 47.6
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 6.1e-158 562.0 688 48.3
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 6.1e-158 562.0 697 46.9
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 1.0e-157 561.2 685 47.4
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 1.0e-157 561.2 723 46.5
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 1.0e-157 561.2 680 46.5
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 2.3e-157 560.1 695 47.2
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 2.3e-157 560.1 686 47.1
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.3e-156 556.2 669 48.6
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 4.3e-156 555.8 681 47.3
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 7.4e-156 555.1 698 47.0
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 9.7e-156 554.7 681 48.2
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 9.7e-156 554.7 671 47.1
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.7e-155 553.9 683 46.4
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 4.8e-155 552.4 678 48.4
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 4.8e-155 552.4 692 47.1
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 8.2e-155 551.6 720 46.8
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 3.1e-154 549.7 678 47.6
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 4.1e-154 549.3 676 45.4
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 6.9e-154 548.5 694 46.4
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 6.9e-154 548.5 683 47.1
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 1.2e-153 547.7 673 47.8
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 2.6e-153 546.6 676 45.4
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 4.5e-153 545.8 692 46.4
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 2.9e-152 543.1 708 45.6
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 3.8e-152 542.7 689 46.3
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.1e-151 541.2 685 46.7
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 1.9e-151 540.4 676 44.7
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 1.2e-150 537.7 680 47.2
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 1.6e-150 537.3 684 43.9
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 3.6e-150 536.2 678 46.6
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 4.7e-150 535.8 675 45.3
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 4.7e-150 535.8 683 43.6
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 5.7e-148 528.9 689 44.4
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 2.2e-147 526.9 677 44.3
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.2e-147 526.9 684 45.8
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 6.3e-147 525.4 678 45.1
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.1e-146 524.6 687 46.4
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.8e-146 523.9 668 47.5
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 2.4e-146 523.5 683 45.7
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 7.0e-146 521.9 695 44.7
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.2e-145 521.2 674 44.7
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.2e-145 521.2 681 46.4
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.0e-144 518.1 696 43.7
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 5.2e-141 505.8 695 44.0
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.0e-140 503.8 599 48.7
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 1.1e-138 498.0 667 43.9
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 1.4e-138 497.7 734 42.4
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.4e-138 496.9 707 42.9
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 3.5e-137 493.0 668 45.4
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 3.8e-136 489.6 595 46.4
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 9.4e-135 485.0 603 46.6
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.1e-134 483.8 612 48.4
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 4.4e-132 476.1 678 40.7
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 5.7e-132 475.7 668 43.0
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 7.0e-130 468.8 659 43.1
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 3.6e-126 456.4 683 42.9
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 1.4e-122 444.5 688 42.0
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 1.6e-121 441.0 551 48.6
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 1.5e-119 434.5 524 46.2
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 5.6e-119 432.6 515 48.5
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 6.1e-118 429.1 488 48.2
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 5.4e-114 416.0 518 47.5
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 3.2e-106 390.2 677 40.5
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.7e-104 384.4 505 47.1
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 2.5e-103 380.6 530 42.5
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 4.0e-101 373.2 643 38.9
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 8.9e-101 372.1 698 36.0
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 1.2e-94 351.7 470 45.3
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.2e-92 345.1 347 53.9
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 4.1e-90 336.7 715 34.5
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.2e-86 325.1 447 43.6
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 2.8e-86 323.9 695 33.8
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 2.4e-85 320.9 497 40.8
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.7e-83 314.7 571 37.5
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 3.5e-81 307.0 407 44.7
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 1.7e-80 304.7 780 31.3
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 7.3e-79 299.3 450 40.7
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.1e-78 297.7 294 55.8
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.4e-77 295.0 698 33.4
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.4e-74 284.3 356 45.2
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 7.1e-74 282.7 556 37.1
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 6.0e-73 279.6 311 48.9
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 7.9e-73 279.3 282 51.4
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 1.9e-71 274.6 262 57.3
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 1.6e-65 255.0 629 31.6
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 3.1e-61 240.7 254 53.5
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 1.0e-56 225.7 291 43.0
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 6.1e-49 199.9 425 34.4
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 3.9e-48 197.2 618 29.6
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 2.5e-47 194.5 163 61.3
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 7.4e-47 193.0 205 48.8
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 1.2e-36 159.1 154 50.6
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 4.5e-36 157.1 223 41.3
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 7.7e-36 156.4 721 25.7
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 2.0e-28 131.7 170 49.4
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 3.0e-24 117.9 85 62.4
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 2.8e-22 111.3 104 54.8
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 4.1e-21 107.5 134 45.5
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 1.0e-19 102.8 68 67.6
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.5e-15 89.0 61 68.9
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 4.4e-15 87.4 96 50.0
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 1.4e-13 82.4 96 51.0
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.8e-13 82.0 107 42.1
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 9.1e-13 79.7 87 55.2
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.7e-12 78.2 102 45.1
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 3.5e-12 77.8 52 63.5
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 1.1e-10 72.8 50 62.0
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 1.9e-10 72.0 64 51.6
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 8.0e-09 66.6 64 46.9
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 8.8e-08 63.2 60 51.7
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 4.4e-07 60.8 120 34.2
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 2.8e-06 58.2 56 46.4
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 6.3e-06 57.0 103 37.9


User provided reference genes

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