Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 0.0e+00 2015.0 1019 100.0
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 4.1e-238 828.9 970 48.0
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 6.4e-215 751.9 940 46.4
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 4.3e-211 739.2 984 42.5
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.9e-206 723.8 964 43.2
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 3.6e-202 709.5 965 42.7
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 4.8e-202 709.1 967 44.3
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 1.9e-198 697.2 965 42.2
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 3.7e-194 682.9 967 41.2
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.4e-193 681.0 940 42.0
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 5.3e-193 679.1 963 41.1
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 1.3e-191 674.5 974 40.5
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 4.6e-189 666.0 969 39.9
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 6.7e-188 662.1 970 40.8
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 2.1e-186 657.1 940 40.5
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 8.2e-186 655.2 964 39.6
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 7.6e-184 648.7 968 40.4
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 7.6e-184 648.7 968 40.4
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 7.6e-184 648.7 1031 38.2
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 4.9e-183 646.0 966 39.2
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.9e-182 644.0 979 39.0
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 3.2e-182 643.3 958 39.2
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 4.2e-182 642.9 969 40.5
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 4.2e-182 642.9 964 39.3
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 2.7e-181 640.2 966 39.4
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 1.0e-180 638.3 979 39.6
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 1.3e-180 637.9 880 42.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 5.7e-179 632.5 968 39.3
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 7.4e-179 632.1 994 39.1
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 6.3e-178 629.0 969 39.5
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 8.2e-178 628.6 932 39.5
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 4.1e-177 626.3 968 38.6
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 6.9e-177 625.5 966 38.3
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.5e-176 624.4 964 38.9
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 2.6e-176 623.6 982 40.3
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.8e-175 619.8 964 38.2
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 2.7e-173 613.6 966 38.6
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 4.6e-173 612.8 966 38.2
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.1e-171 608.2 966 37.9
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 2.0e-171 607.4 966 39.2
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 2.5e-171 607.1 967 39.2
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 3.3e-171 606.7 963 38.8
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.4e-169 601.3 1038 36.5
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 3.1e-169 600.1 966 37.6
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.7e-167 594.3 968 37.6
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 2.2e-167 594.0 963 37.5
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 2.2e-167 594.0 783 42.4
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 3.8e-167 593.2 963 37.9
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.1e-166 591.7 966 36.3
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 9.4e-166 588.6 986 37.9
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.0e-164 583.6 974 37.2
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 2.6e-163 580.5 968 36.5
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 4.1e-161 573.2 971 36.9
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 5.9e-160 569.3 966 36.1
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 1.9e-158 564.3 965 36.4
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 4.2e-158 563.1 831 39.7
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 3.9e-156 556.6 966 36.0
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 5.2e-156 556.2 989 36.9
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 5.2e-156 556.2 970 35.8
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 8.8e-156 555.4 965 36.2
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 3.3e-155 553.5 980 36.8
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 9.7e-155 552.0 979 37.0
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 1.4e-153 548.1 963 36.1
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 4.1e-153 546.6 984 34.9
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 5.3e-153 546.2 925 35.4
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 9.1e-153 545.4 980 36.6
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 2.0e-152 544.3 980 36.3
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 1.1e-150 538.5 893 37.4
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 2.5e-150 537.3 930 35.4
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 2.0e-147 527.7 983 36.1
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 3.7e-146 523.5 981 35.8
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 1.1e-145 521.9 987 35.2
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 1.4e-145 521.5 981 35.6
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 6.5e-143 512.7 984 35.4
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 1.5e-139 501.5 525 49.0
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 3.5e-136 490.3 845 36.0
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 4.2e-134 483.4 855 35.6
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 2.8e-130 470.7 1001 34.3
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 1.6e-128 464.9 531 47.3
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 3.9e-127 460.3 535 46.7
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 8.3e-122 442.6 852 35.6
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.4e-121 441.8 1015 32.7
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 1.6e-117 428.3 921 33.1
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 5.1e-103 380.2 1030 29.4
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 8.6e-103 379.4 456 46.9
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.2e-101 375.6 515 43.5
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 6.8e-100 369.8 1011 28.3
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.4e-97 361.3 491 42.4
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 1.0e-95 355.9 987 27.8
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 3.1e-92 344.4 617 35.2
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 3.1e-92 344.4 907 28.7
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.4e-89 335.5 551 38.8
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 5.1e-87 327.0 386 45.9
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 2.0e-75 288.5 976 27.0
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 4.9e-74 283.9 351 45.0
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.6e-72 278.9 422 41.2
Hund21095 Selenicereus undatus HOM05D008000 ORTHO05D010275 8.2e-69 266.5 149 87.2
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 1.1e-68 266.2 269 51.3
Hund09820 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.1e-64 251.9 168 76.8
Hund05359 Selenicereus undatus HOM05D008000 ORTHO05D010275 7.9e-64 250.0 149 81.9
Hund26757 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.3e-63 249.2 168 76.2
Hund08661 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.0e-63 248.1 197 67.5
Hund25546 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.9e-63 247.7 168 75.6
Hund08151 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.1e-63 247.3 168 75.6
Hund20190 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.7e-63 246.9 168 75.6
Hund06916 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.9e-62 245.4 168 75.6
Hund24371 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.7e-62 243.8 142 84.5
Hund15109 Selenicereus undatus HOM05D008000 ORTHO05D010275 4.1e-60 237.7 170 70.0
Hund14462 Selenicereus undatus HOM05D008000 ORTHO05D010275 4.5e-59 234.2 157 75.2
Hund08678 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.9e-59 233.8 169 69.2
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 5.9e-59 233.8 170 68.8
Hund02019 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.5e-58 230.3 169 73.4
Hund17676 Selenicereus undatus HOM05D008000 ORTHO05D010275 7.2e-57 226.9 185 65.4
Hund12932 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.0e-55 223.0 123 86.2
Hund22663 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.7e-55 220.3 184 64.7
Hund14460 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.2e-53 215.3 170 65.9
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 2.4e-52 211.8 493 30.2
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 2.0e-51 208.8 177 59.9
Hund10465 Selenicereus undatus HOM05D008000 ORTHO05D010275 8.5e-50 203.4 155 67.7
Hund10172 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.4e-49 202.6 144 70.1
Hund14938 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.5e-49 201.8 161 69.6
Hund02005 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.3e-46 191.4 116 78.4
Hund07660 Selenicereus undatus HOM05D008000 ORTHO05D010275 7.4e-46 190.3 168 62.5
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 3.7e-45 188.0 253 43.1
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 3.7e-45 188.0 253 43.1
Hund24402 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.0e-42 177.6 209 52.2
Hund13902 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.7e-39 167.2 170 58.8
Hund24924 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.6e-38 165.2 165 57.6
Hund17143 Selenicereus undatus HOM05D008000 ORTHO05D010275 4.4e-38 164.5 149 63.8
Hund20534 Selenicereus undatus HOM05D008000 ORTHO05D010275 9.7e-38 163.3 172 57.6
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 3.1e-36 158.3 191 43.5
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 7.0e-36 157.1 173 45.1
Hund15241 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.8e-34 151.4 122 65.6
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 3.4e-30 138.3 166 42.8
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.2e-29 135.6 203 37.9
Hund17752 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.4e-28 132.9 107 63.6
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 1.2e-27 129.8 194 39.7
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 1.2e-27 129.8 194 39.7
Hund17310 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.0e-26 124.4 75 78.7
Hund10806 Selenicereus undatus HOM05D008000 ORTHO05D010275 9.4e-25 120.2 74 79.7
Hund21125 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.6e-24 119.4 75 77.3
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 1.0e-23 116.7 449 27.4
Hund13155 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.4e-23 116.3 71 81.7
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 5.7e-22 110.9 118 48.3
Hund10619 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.1e-20 106.7 101 57.4
Hund11620 Selenicereus undatus HOM05D008000 ORTHO05D010275 9.2e-20 103.6 93 58.1
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.2e-19 103.2 162 37.0
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 5.9e-19 100.9 120 42.5
Hund13154 Selenicereus undatus HOM05D008000 ORTHO05D010275 7.7e-19 100.5 66 72.7
Hund24420 Selenicereus undatus HOM05D008000 ORTHO05D010275 7.7e-19 100.5 62 80.6
Hund19607 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.7e-18 99.4 133 45.1
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 3.3e-17 95.1 105 48.6
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 5.6e-17 94.4 116 43.1
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.8e-16 92.0 186 36.0
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 3.6e-16 91.7 84 53.6
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 6.1e-16 90.9 82 54.9
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 8.0e-16 90.5 193 35.2
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 8.0e-16 90.5 121 43.0
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 1.8e-15 89.4 111 45.0
Hund10231 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.8e-15 87.4 142 41.5
Hund22403 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.8e-15 87.4 77 59.7
Hund13417 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.5e-14 86.3 78 59.0
Hund02471 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.3e-13 83.2 70 57.1
Hund24195 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.3e-13 83.2 47 85.1
Hund22284 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.7e-13 82.8 73 60.3
Hund23991 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.7e-13 82.8 73 60.3
Hund09933 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.4e-12 77.8 58 69.0
Hund15242 Selenicereus undatus HOM05D000055 ORTHO05D001675 1.6e-11 76.3 87 51.7
Hund12935 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.7e-11 75.5 46 78.3
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 4.6e-11 74.7 116 37.9
SEGI_10601 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.0e-10 73.6 78 43.6
Hund15386 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.3e-10 73.2 44 77.3
Hund22678 Selenicereus undatus HOM05D003449 ORTHO05D004133 1.7e-10 72.8 55 60.0
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 2.3e-10 72.4 77 44.2
Hund16355 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.3e-10 72.4 44 79.5
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 3.0e-10 72.0 121 34.7
Hund11624 Selenicereus undatus HOM05D001090 ORTHO05D006167 3.0e-10 72.0 75 54.7
Hund14459 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.9e-10 71.6 40 85.0
Hund15137 Selenicereus undatus HOM05D008000 ORTHO05D010275 8.6e-10 70.5 60 65.0
Hund24935 Selenicereus undatus HOM05D008000 ORTHO05D010275 8.6e-10 70.5 45 75.6
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.1e-09 70.1 121 33.9
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.5e-09 69.7 75 44.0
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 3.3e-09 68.6 115 35.7
Hund24347 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.6e-09 67.8 69 58.0
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.8e-08 65.5 61 52.5
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 1.5e-06 59.7 60 50.0
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.5e-06 59.7 53 52.8
Hund17864 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.8e-06 57.8 63 49.2


User provided reference genes

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