Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 0.0e+00 1329.7 701 100.0
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 8.4e-291 1003.4 661 84.0
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 7.2e-133 478.8 660 47.9
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 7.2e-133 478.8 661 47.8
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 1.8e-120 437.6 654 45.3
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 9.5e-109 398.7 659 43.2
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 1.5e-90 338.2 683 37.3
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 1.9e-88 331.3 661 38.7
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 2.4e-88 330.9 683 37.0
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.5e-77 295.0 696 35.5
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 4.7e-76 290.0 686 35.3
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.4e-75 288.5 683 36.3
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.2e-73 281.2 693 34.5
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 6.4e-73 279.6 678 33.9
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 1.1e-72 278.9 697 34.3
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 4.2e-72 276.9 688 34.7
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.9e-69 268.1 738 31.8
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 8.1e-68 262.7 704 33.7
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 5.3e-67 260.0 689 33.8
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 1.5e-66 258.5 813 30.3
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 4.9e-65 253.4 687 32.9
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 3.2e-64 250.8 685 34.6
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 9.3e-64 249.2 697 34.3
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 3.3e-61 240.7 683 32.5
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 4.8e-60 236.9 699 33.6
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 2.4e-59 234.6 684 31.0
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 4.0e-59 233.8 686 32.9
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 4.0e-59 233.8 685 33.0
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 4.0e-59 233.8 713 32.5
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 4.5e-58 230.3 702 33.8
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 5.8e-58 229.9 716 33.2
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 1.3e-57 228.8 684 33.0
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 1.3e-57 228.8 703 30.2
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 2.2e-57 228.0 691 32.6
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 2.2e-57 228.0 694 32.7
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 6.4e-57 226.5 845 28.8
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 8.4e-57 226.1 701 33.2
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 1.1e-56 225.7 683 32.8
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 1.4e-56 225.3 692 31.8
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 3.2e-56 224.2 684 31.9
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 5.5e-56 223.4 691 31.8
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 5.5e-56 223.4 685 31.5
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 1.2e-55 222.2 647 32.5
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 4.6e-55 220.3 681 31.9
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 4.6e-55 220.3 648 32.4
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 1.8e-54 218.4 680 32.8
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.3e-54 218.0 687 31.9
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.0e-54 217.6 715 32.3
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 1.1e-53 215.7 685 32.0
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.5e-53 214.5 646 32.2
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 3.3e-53 214.2 632 33.7
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 5.6e-53 213.4 694 31.3
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 5.6e-53 213.4 675 31.1
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.6e-52 211.8 648 32.1
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 4.8e-52 210.3 684 31.4
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 1.1e-51 209.1 680 31.2
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.1e-51 209.1 687 31.0
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.8e-51 208.4 667 30.1
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 4.0e-51 207.2 719 30.7
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 4.0e-51 207.2 683 31.6
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 6.9e-51 206.5 649 31.9
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 1.2e-50 205.7 713 29.9
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 2.0e-50 204.9 673 31.1
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 4.9e-49 200.3 683 30.6
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 4.2e-48 197.2 701 30.2
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 2.7e-47 194.5 716 30.9
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 3.5e-47 194.1 706 30.9
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.3e-46 192.2 662 28.7
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 5.1e-46 190.3 650 31.2
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 5.1e-46 190.3 662 30.2
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 5.1e-46 190.3 702 29.6
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.9e-45 188.3 704 31.4
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 1.9e-45 188.3 705 30.9
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 5.7e-45 186.8 640 30.9
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 3.7e-44 184.1 679 30.9
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 3.7e-44 184.1 662 30.8
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 2.4e-43 181.4 712 31.3
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 4.1e-43 180.6 756 29.1
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.0e-41 176.0 650 29.5
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 3.8e-41 174.1 688 31.0
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 9.3e-40 169.5 725 29.4
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 2.7e-39 167.9 705 28.7
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 3.5e-39 167.5 730 29.5
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 6.7e-38 163.3 723 26.8
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 1.9e-37 161.8 652 29.3
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 2.5e-37 161.4 730 27.8
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 3.7e-36 157.5 671 28.5
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 3.7e-36 157.5 683 29.6
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 1.8e-35 155.2 676 28.0
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 4.1e-35 154.1 697 27.1
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 5.9e-34 150.2 708 29.1
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 1.0e-33 149.4 638 29.5
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 2.9e-33 147.9 696 28.6
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 8.5e-33 146.4 717 28.5
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 4.6e-31 140.6 735 25.7
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.0e-30 139.4 707 27.9
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 1.4e-30 139.0 665 28.4
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.1e-29 136.0 704 27.6
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 3.3e-29 134.4 624 28.8
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 1.3e-28 132.5 679 27.7
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 1.5e-26 125.6 705 26.7
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 2.6e-26 124.8 663 26.7
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 4.5e-26 124.0 694 25.8
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 1.3e-25 122.5 666 27.6
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 1.7e-25 122.1 554 28.2
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 4.7e-23 114.0 601 30.3
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 6.1e-23 113.6 592 28.9
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 1.8e-22 112.1 599 28.7
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 3.0e-22 111.3 687 28.2
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 2.6e-21 108.2 139 43.2
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 6.3e-20 103.6 708 28.2
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 8.2e-20 103.2 545 28.6
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 1.4e-19 102.4 110 45.5
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 1.0e-17 96.3 573 27.9
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 1.7e-17 95.5 698 28.4
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 2.9e-17 94.7 573 28.4
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 6.5e-17 93.6 574 27.7
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 1.9e-16 92.0 577 27.4
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 1.2e-15 89.4 571 25.6
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 4.7e-15 87.4 567 27.2
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 4.7e-15 87.4 567 27.2
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 8.0e-15 86.7 665 24.5
AUR62017309 Chenopodium quinoa HOM05D005664 ORTHO05D006509 1.1e-13 82.8 63 61.9
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 6.3e-12 77.0 558 28.0
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 6.3e-12 77.0 558 28.0
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.8e-11 75.5 179 31.3
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 3.1e-11 74.7 240 30.8
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 5.3e-11 73.9 624 25.6
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 1.6e-07 62.4 109 38.5
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 2.1e-07 62.0 445 25.6


User provided reference genes

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