Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 2.4e-113 412.1 200 100.0
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.6e-77 293.1 171 79.5
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 7.9e-77 290.8 171 78.9
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 2.8e-74 282.3 179 73.7
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 3.1e-73 278.9 169 75.7
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 1.5e-72 276.6 184 70.7
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.0e-72 276.2 169 72.8
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 2.6e-72 275.8 157 76.4
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 5.9e-72 274.6 178 74.2
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.7e-71 273.1 168 72.0
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 1.4e-70 270.0 185 67.6
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 1.2e-69 266.9 161 73.9
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 1.2e-69 266.9 183 65.6
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 3.6e-69 265.4 180 68.9
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 4.7e-69 265.0 175 70.9
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.0e-68 263.8 170 69.4
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.0e-68 263.8 169 71.6
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 1.8e-68 263.1 184 66.8
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 5.2e-68 261.5 171 68.4
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 6.7e-68 261.2 184 66.8
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 8.8e-68 260.8 188 66.5
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.0e-67 259.6 169 70.4
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 2.0e-67 259.6 169 70.4
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.0e-67 259.6 170 70.6
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.0e-67 259.6 206 60.7
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 2.6e-67 259.2 169 68.0
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 3.3e-67 258.8 174 69.0
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 3.3e-67 258.8 171 69.6
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.3e-67 258.8 169 69.8
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 3.3e-67 258.8 171 67.8
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 7.4e-67 257.7 162 72.8
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 7.4e-67 257.7 169 69.2
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 7.4e-67 257.7 164 71.3
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 9.7e-67 257.3 169 69.2
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 9.7e-67 257.3 178 67.4
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 2.2e-66 256.1 161 70.8
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 2.2e-66 256.1 183 64.5
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 2.2e-66 256.1 166 67.5
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 4.8e-66 255.0 179 63.1
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 4.8e-66 255.0 171 69.0
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.3e-66 254.6 169 69.2
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 8.2e-66 254.2 161 71.4
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 1.1e-65 253.8 177 66.7
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 1.1e-65 253.8 177 66.7
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.1e-65 253.8 167 67.1
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.4e-65 253.4 191 65.4
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.4e-65 253.4 183 63.9
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 1.4e-65 253.4 169 68.6
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.8e-65 253.1 179 65.4
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.8e-65 253.1 177 67.2
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.8e-65 253.1 160 70.0
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.4e-65 252.7 170 67.1
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 2.4e-65 252.7 171 64.9
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.1e-65 252.3 181 65.7
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.1e-65 252.3 169 68.6
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 3.1e-65 252.3 179 64.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 4.1e-65 251.9 179 64.8
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 4.1e-65 251.9 192 64.6
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 4.1e-65 251.9 189 61.9
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 4.1e-65 251.9 173 67.1
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 5.3e-65 251.5 183 62.8
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 7.0e-65 251.1 170 67.6
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 7.0e-65 251.1 167 67.7
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 9.1e-65 250.8 177 64.4
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.2e-64 250.4 178 65.7
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 1.6e-64 250.0 169 66.3
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.0e-64 249.6 168 66.7
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 2.0e-64 249.6 179 63.7
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 2.6e-64 249.2 170 66.5
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.7e-63 246.5 170 65.9
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 2.2e-63 246.1 181 64.6
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 2.2e-63 246.1 190 60.5
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.9e-63 245.7 177 64.4
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.9e-63 245.7 153 71.2
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 3.8e-63 245.4 179 62.6
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 3.8e-63 245.4 169 65.7
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.5e-62 243.4 180 65.0
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 2.5e-62 242.7 181 64.1
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 2.5e-62 242.7 167 65.9
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 3.2e-62 242.3 181 63.5
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.2e-62 242.3 173 64.7
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 9.4e-62 240.7 180 63.9
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 1.6e-61 240.0 171 63.7
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.8e-60 236.5 171 64.9
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 1.8e-60 236.5 146 76.7
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.8e-60 236.5 175 62.3
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 2.6e-59 232.6 178 62.4
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.3e-59 232.3 148 70.9
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 3.3e-59 232.3 176 60.8
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 5.7e-59 231.5 173 63.6
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.4e-57 226.9 164 65.9
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.8e-57 226.5 171 60.2
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.1e-57 225.7 178 61.2
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 5.9e-56 221.5 171 57.9
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 2.9e-55 219.2 170 61.2
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 6.8e-52 208.0 126 74.6
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 2.2e-50 203.0 290 41.0
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.2e-48 197.2 173 56.1
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 4.5e-48 195.3 185 45.9
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 5.9e-48 194.9 136 71.3
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 5.9e-48 194.9 196 47.4
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.4e-41 173.7 162 48.8
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 7.5e-35 151.4 183 38.3
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.6e-32 143.7 161 42.9
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 3.5e-32 142.5 107 59.8
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 8.3e-26 121.3 66 75.8
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.7e-23 113.6 195 33.8
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.3e-22 109.0 91 60.4
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.1e-20 104.4 93 57.0
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 6.8e-20 101.7 163 36.8
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 2.9e-18 96.3 175 33.7
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 6.0e-16 88.6 79 55.7
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 9.9e-11 71.2 107 36.4
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 1.0e-07 61.2 52 55.8
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 9.6e-06 54.7 32 65.6
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 9.6e-06 54.7 32 65.6


User provided reference genes

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