Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01601 Selenicereus undatus HOM05D000082 ORTHO05D000038 3.1e-194 681.8 390 100.0
EL10Ac1g02173 Beta vulgaris HOM05D000082 ORTHO05D000038 2.0e-47 194.1 303 56.1
Sc15g0004890 Simmondsia chinensis HOM05D000082 ORTHO05D000038 9.8e-47 191.8 282 47.5
Prupe.1G363700 Prunus persica HOM05D000082 ORTHO05D000038 3.1e-45 186.8 283 50.5
Manes.05G145800 Manihot esculenta HOM05D000082 ORTHO05D000038 7.0e-45 185.7 298 49.3
RcHm_v2.0_Chr6g0303101 Rosa chinensis HOM05D000082 ORTHO05D000038 7.7e-44 182.2 294 51.0
FAN15G1934 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.8e-43 179.9 270 45.2
MD08G1011000 Malus domestica HOM05D000082 ORTHO05D000038 8.6e-43 178.7 301 50.2
TAR628G0501 Trochodendron aralioides HOM05D000082 ORTHO05D000038 1.5e-42 177.9 281 42.3
Phvul.007G014100 Phaseolus vulgaris HOM05D000082 ORTHO05D000038 3.3e-42 176.8 261 46.7
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 4.3e-42 176.4 272 53.3
Ah.00g000270 Amaranthus hybridus HOM05D000082 ORTHO05D000038 7.3e-42 175.6 112 75.9
Cpa.g.sc26.313 Carica papaya HOM05D000082 ORTHO05D000038 1.2e-41 174.9 297 53.2
FAN20G2922 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.6e-41 173.3 270 46.7
VMungo0720G0321 Vigna mungo HOM05D000082 ORTHO05D000038 3.6e-41 173.3 262 45.8
Glyma.20G102400 Glycine max HOM05D000082 ORTHO05D000038 8.0e-41 172.2 273 52.7
MD15G1011000 Malus domestica HOM05D000082 ORTHO05D000038 8.0e-41 172.2 304 46.1
TAR381G0957 Trochodendron aralioides HOM05D000082 ORTHO05D000038 8.0e-41 172.2 276 49.3
Eucgr.H00970 Eucalyptus grandis HOM05D000082 ORTHO05D000038 1.4e-40 171.4 271 49.8
Rhsim06G0020000 Rhododendron simsii HOM05D000082 ORTHO05D000038 1.4e-40 171.4 275 52.7
PGR031G3416 Punica granatum HOM05D000082 ORTHO05D000038 3.0e-40 170.2 292 50.0
CSS0015812 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D000038 5.2e-40 169.5 267 47.6
FvH4_2g38280 Fragaria vesca HOM05D000082 ORTHO05D000038 6.8e-40 169.1 276 48.2
Glyma.10G286700 Glycine max HOM05D000082 ORTHO05D000038 2.6e-39 167.2 257 49.8
TAR625G0374 Trochodendron aralioides HOM05D000082 ORTHO05D000038 2.6e-39 167.2 279 41.6
Atru.chr13.269 Acer truncatum HOM05D000082 ORTHO05D000038 5.7e-39 166.0 287 50.9
FAN27G0304 Fragaria x ananassa HOM05D000082 ORTHO05D000038 5.7e-39 166.0 273 46.2
Cc10_g01520 Coffea canephora HOM05D000082 ORTHO05D000038 1.7e-38 164.5 289 47.4
TWI56G0761 Tripterygium wilfordii HOM05D000082 ORTHO05D000038 2.2e-38 164.1 290 45.2
Migut.N03169 Erythranthe guttata HOM05D000082 ORTHO05D000038 6.4e-38 162.5 317 48.3
Lj4C22T17 Lonicera japonica HOM05D000082 ORTHO05D000038 4.1e-37 159.8 279 54.1
Psat6g234240 Pisum sativum HOM05D000082 ORTHO05D000038 5.4e-37 159.5 269 39.8
CiPaw.07G148300 Carya illinoinensis HOM05D000082 ORTHO05D000038 9.2e-37 158.7 270 54.4
Medtr1g114620 Medicago truncatula HOM05D000082 ORTHO05D000038 1.6e-36 157.9 257 39.7
SGA_v2.0_scaffold47G17499 Striga asiatica HOM05D000082 ORTHO05D000038 1.6e-36 157.9 309 38.2
Ciclev10001606m.g Citrus clementina HOM05D000082 ORTHO05D000038 2.0e-36 157.5 307 48.2
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 2.7e-36 157.1 177 54.8
TPR.G4089 Trifolium pratense HOM05D000082 ORTHO05D000038 1.0e-35 155.2 257 39.3
Lalb_Chr21g0307061 Lupinus albus HOM05D000082 ORTHO05D000038 1.7e-35 154.5 287 48.8
arahy.Tifrunner.gnm1.ann1.1ZYH04 Arachis hypogaea HOM05D000082 ORTHO05D000038 2.3e-35 154.1 120 65.0
Lalb_Chr06g0163961 Lupinus albus HOM05D000082 ORTHO05D000038 3.0e-35 153.7 262 42.4
Ca_11263_v3 Cicer arietinum L. HOM05D000082 ORTHO05D000038 1.5e-34 151.4 270 50.7
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 9.5e-34 148.7 233 40.8
Lsat_1_v5_gn_0_1340 Lactuca sativa HOM05D000082 ORTHO05D000038 9.5e-34 148.7 286 48.6
Aqoxy6G02256 Aquilegia oxysepala HOM05D000082 ORTHO05D000038 1.2e-33 148.3 118 61.9
QL02p011949 Quercus lobata HOM05D000082 ORTHO05D000038 1.6e-33 147.9 294 48.6
AUR62041485 Chenopodium quinoa HOM05D000082 ORTHO05D000038 2.1e-33 147.5 284 37.0
Haze_22651 Corylus avellana HOM05D000082 ORTHO05D000038 2.1e-33 147.5 293 41.0
Oeu054484.1 Olea europaea HOM05D000082 ORTHO05D000038 2.1e-33 147.5 276 40.9
Cfa013968 Carpinus fangiana HOM05D000082 ORTHO05D000038 4.7e-33 146.4 295 40.3
Peaxi162Scf00072g00054 Petunia axillaris HOM05D000082 ORTHO05D000038 6.2e-33 146.0 304 48.0
Nitab4.5_0009402g0010 Nicotiana tabacum HOM05D000082 ORTHO05D000038 1.0e-32 145.2 302 47.4
PGSC0003DMG400031865 Solanum tuberosum HOM05D000082 ORTHO05D000038 1.4e-32 144.8 299 43.8
THA.LOC104806877 Tarenaya hassleriana HOM05D000082 ORTHO05D000038 2.3e-32 144.1 110 64.5
Sopen09g029310 Solanum pennellii HOM05D000082 ORTHO05D000038 4.0e-32 143.3 302 43.4
Solyc09g074460.3 Solanum lycopersicum HOM05D000082 ORTHO05D000038 1.2e-31 141.7 300 41.0
Oeu007358.1 Olea europaea HOM05D000082 ORTHO05D000038 3.4e-31 140.2 285 48.4
CAN.G1076.32 Capsicum annuum HOM05D000082 ORTHO05D000038 4.4e-31 139.8 114 63.2
ECA233G2881 Erigeron canadensis HOM05D000082 ORTHO05D000038 4.4e-31 139.8 325 42.2
Lj5g0011695 Lotus japonicus HOM05D000082 ORTHO05D000038 4.4e-31 139.8 275 41.8
Nitab4.5_0000575g0230 Nicotiana tabacum HOM05D000082 ORTHO05D000038 4.4e-31 139.8 311 42.8
HanXRQChr11g0322711 Helianthus annuus HOM05D000082 ORTHO05D000038 4.9e-30 136.3 129 59.7
PSO541G5415 Papaver somniferum HOM05D000082 ORTHO05D000038 8.3e-30 135.6 300 38.3
AUR62040547 Chenopodium quinoa HOM05D000082 ORTHO05D000038 1.4e-29 134.8 285 34.7
Actinidia22314 Actinidia chinensis HOM05D000082 ORTHO05D000038 7.8e-28 129.0 300 33.3
Oeu046284.1 Olea europaea HOM05D000082 ORTHO05D000038 7.8e-28 129.0 113 57.5
MSTRG.24239 Avicennia marina HOM05D000082 ORTHO05D000038 3.9e-27 126.7 107 59.8
Sp2g28000 Schrenkiella parvula HOM05D000082 ORTHO05D000038 1.5e-26 124.8 274 46.4
Carub.0008s2575 Capsella rubella HOM05D000082 ORTHO05D000038 1.2e-25 121.7 283 40.3
CARHR278960 Cardamine hirsuta HOM05D000082 ORTHO05D000038 2.8e-25 120.6 280 47.5
GSVIVG01009934001 Vitis vinifera HOM05D000082 ORTHO05D000038 1.8e-24 117.9 278 32.0
PSO675G3305 Papaver somniferum HOM05D000082 ORTHO05D000038 6.8e-24 115.9 307 39.7
Thhalv10005668m.g Eutrema salsugineum HOM05D000082 ORTHO05D000038 5.8e-23 112.8 291 41.6
AL8G42420 Arabidopsis lyrata HOM05D000082 ORTHO05D000038 3.7e-22 110.2 285 40.4
SEGI_01397 Sequoiadendron giganteum HOM05D000082 ORTHO05D000038 3.7e-22 110.2 120 51.7
SEGI_40214 Sequoiadendron giganteum HOM05D000082 ORTHO05D000038 3.7e-22 110.2 120 51.7
HanXRQChr12g0366841 Helianthus annuus HOM05D000082 ORTHO05D000038 8.3e-22 109.0 111 54.1
Oeu054485.1 Olea europaea HOM05D000082 ORTHO05D000038 6.0e-20 102.8 84 57.1
AT5G64920 Arabidopsis thaliana HOM05D000082 ORTHO05D000038 7.8e-20 102.4 293 37.9
C09p10310 Brassica napus HOM05D000082 ORTHO05D000038 7.3e-18 95.9 100 55.0
BcaC04g23274 Brassica carinata HOM05D000082 ORTHO05D000038 2.8e-17 94.0 100 54.0
BolC9t53931H Brassica oleracea HOM05D000082 ORTHO05D000038 2.8e-17 94.0 100 54.0
BcaB04g19999 Brassica carinata HOM05D000082 ORTHO05D000038 2.3e-16 90.9 101 55.4
Lsat_1_v5_gn_2_12880 Lactuca sativa HOM05D000082 ORTHO05D000038 3.1e-16 90.5 110 46.4
Sc02g0008630 Simmondsia chinensis HOM05D000082 ORTHO05D000038 2.6e-15 87.4 57 70.2
A09p08890 Brassica napus HOM05D000082 ORTHO05D000038 1.4e-13 81.6 103 48.5
BraA09t36540Z Brassica rapa HOM05D000082 ORTHO05D000038 4.1e-13 80.1 104 47.1
SEGI_21297 Sequoiadendron giganteum HOM05D000082 ORTHO05D000038 4.6e-12 76.6 85 45.9
SGA_v2.0_scaffold390G50587 Striga asiatica HOM05D000082 ORTHO05D000038 6.0e-12 76.3 67 47.8
Mapoly0039s0011 Marchantia polymorpha HOM05D000082 ORTHO05D000038 2.3e-11 74.3 88 44.3
AagrBONN_evm.TU.Sc2ySwM_368.1483 Anthoceros agrestis HOM05D000082 ORTHO05D000038 2.5e-10 70.9 127 38.6
SEGI_01980 Sequoiadendron giganteum HOM05D000082 ORTHO05D000038 1.4e-08 65.1 93 39.8
PSO339G4294 Papaver somniferum HOM05D000082 ORTHO05D000038 2.0e-07 61.2 78 42.3
Peaxi162Scf00019g00033 Petunia axillaris HOM05D000082 ORTHO05D000038 3.4e-07 60.5 112 33.9
DCAR_016726 Daucus carota HOM05D000082 ORTHO05D000038 7.6e-07 59.3 64 43.8
CBR_g23334 Chara braunii HOM05D000082 ORTHO05D000038 1.3e-06 58.5 84 40.5
CBR_g49311 Chara braunii HOM05D000082 ORTHO05D000038 1.3e-06 58.5 89 39.3
PSO384G3041 Papaver somniferum HOM05D000082 ORTHO05D000038 1.3e-06 58.5 78 41.0
MELO3C022061.2 Cucumis melo HOM05D000082 ORTHO05D000038 1.7e-06 58.2 69 44.9
CsaV3_5G038810 Cucumis sativus L. HOM05D000082 ORTHO05D000038 1.7e-06 58.2 69 44.9
FAN02G2107 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.2e-06 57.8 104 35.6
FvH4_6g09350 Fragaria vesca HOM05D000082 ORTHO05D000038 2.9e-06 57.4 104 36.5
FAN09G1965 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.9e-06 57.4 104 36.5
FAN14G1480 Fragaria x ananassa HOM05D000082 ORTHO05D000038 2.9e-06 57.4 104 36.5
Solyc02g065650.1 Solanum lycopersicum HOM05D000082 ORTHO05D000038 4.9e-06 56.6 89 38.2
DCAR_015321 Daucus carota HOM05D000082 ORTHO05D000038 6.4e-06 56.2 75 36.0
Sed0014849 Sechium edule HOM05D000082 ORTHO05D000038 6.4e-06 56.2 87 39.1
Peaxi162Scf00732g00009 Petunia axillaris HOM05D000082 ORTHO05D000038 8.4e-06 55.8 61 44.3
SGA_v2.0_scaffold390G50588 Striga asiatica HOM05D000082 ORTHO05D000038 8.4e-06 55.8 106 34.9


User provided reference genes

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