Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 7.0e-93 344.0 177 100.0
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 3.0e-59 232.3 202 63.4
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.9e-58 229.6 218 57.3
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 4.3e-58 228.4 189 64.6
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 5.6e-58 228.0 174 69.5
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 7.3e-58 227.6 221 56.1
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 9.5e-58 227.3 220 56.4
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 1.2e-57 226.9 218 56.4
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 2.8e-57 225.7 224 56.2
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 1.1e-56 223.8 218 55.0
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 1.1e-56 223.8 224 55.4
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 1.4e-56 223.4 226 55.3
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 1.8e-56 223.0 217 58.5
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 2.3e-56 222.6 223 54.7
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 3.1e-56 222.2 220 54.5
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 5.2e-56 221.5 220 55.0
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 8.9e-56 220.7 221 53.4
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.5e-55 219.9 217 55.8
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 1.5e-55 219.9 212 57.1
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 2.6e-55 219.2 219 54.3
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 3.4e-55 218.8 205 58.0
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 3.4e-55 218.8 210 58.6
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 5.8e-55 218.0 212 56.1
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 5.8e-55 218.0 224 54.0
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 5.8e-55 218.0 221 54.8
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 5.8e-55 218.0 217 53.0
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 1.7e-54 216.5 217 56.7
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.7e-54 216.5 224 53.6
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.7e-54 216.5 224 54.0
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.2e-54 216.1 224 54.0
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 2.9e-54 215.7 217 54.8
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 3.7e-54 215.3 228 53.5
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 4.9e-54 214.9 220 53.2
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 4.9e-54 214.9 218 53.7
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 8.3e-54 214.2 221 53.4
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 8.3e-54 214.2 219 53.0
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 1.1e-53 213.8 223 52.9
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 1.4e-53 213.4 218 52.8
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 1.9e-53 213.0 213 55.9
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 2.4e-53 212.6 209 56.9
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 3.2e-53 212.2 204 56.4
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 3.2e-53 212.2 217 52.5
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 5.4e-53 211.5 209 55.0
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 5.4e-53 211.5 221 52.9
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 7.1e-53 211.1 218 54.1
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 9.2e-53 210.7 225 51.1
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 1.6e-52 209.9 208 56.2
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.6e-52 209.9 226 53.1
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 2.7e-52 209.1 224 52.7
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 2.7e-52 209.1 216 51.9
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 3.5e-52 208.8 228 52.6
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 3.5e-52 208.8 223 52.9
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 4.6e-52 208.4 223 52.5
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 6.0e-52 208.0 223 49.8
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 6.0e-52 208.0 227 53.3
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 6.0e-52 208.0 212 54.7
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 6.0e-52 208.0 215 53.5
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 7.8e-52 207.6 225 49.8
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 7.8e-52 207.6 213 53.1
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 1.0e-51 207.2 225 51.6
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 1.0e-51 207.2 213 54.0
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 1.0e-51 207.2 216 51.9
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 2.3e-51 206.1 219 52.5
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.9e-51 205.3 212 53.3
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 3.9e-51 205.3 224 52.2
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 3.9e-51 205.3 224 51.8
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 5.1e-51 204.9 210 56.2
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 5.1e-51 204.9 220 53.2
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 6.6e-51 204.5 221 52.0
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 6.6e-51 204.5 208 55.3
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 8.6e-51 204.1 226 50.4
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 1.5e-50 203.4 208 51.4
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.5e-50 203.4 224 49.6
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 1.5e-50 203.4 225 50.7
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 2.5e-50 202.6 226 51.3
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 9.6e-50 200.7 222 49.1
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.1e-49 199.5 211 53.1
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 3.6e-49 198.7 223 49.8
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 4.7e-49 198.4 206 53.9
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 6.2e-49 198.0 225 50.7
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 6.2e-49 198.0 223 48.9
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 3.1e-48 195.7 209 50.7
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 3.1e-48 195.7 281 44.1
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 8.9e-48 194.1 181 57.5
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 1.7e-46 189.9 216 51.4
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 6.4e-46 188.0 246 47.2
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 8.4e-46 187.6 201 54.2
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 7.1e-45 184.5 227 47.6
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 7.8e-44 181.0 214 50.9
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 7.8e-44 181.0 207 47.8
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.0e-43 180.6 207 48.3
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 1.3e-41 173.7 211 47.9
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 1.6e-41 173.3 207 46.4
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 2.1e-41 172.9 224 45.1
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 8.1e-41 171.0 220 45.9
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 1.8e-40 169.9 220 45.5
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 2.4e-40 169.5 224 45.1
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 1.5e-39 166.8 226 44.7
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 3.4e-39 165.6 188 49.5
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 3.2e-37 159.1 227 43.2
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.3e-35 152.9 223 38.6
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.0e-35 152.5 221 43.0
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 4.8e-33 145.2 211 39.3
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.3e-32 141.7 206 44.7
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 6.9e-32 141.4 204 42.2
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 9.9e-31 137.5 90 76.7
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 2.9e-30 136.0 164 48.2
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 6.4e-30 134.8 105 66.7
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 5.4e-29 131.7 97 69.1
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 9.3e-29 131.0 144 50.7
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.2e-28 130.6 89 69.7
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 1.6e-28 130.2 89 70.8
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-25 120.2 260 31.5
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 6.2e-25 118.2 161 43.5
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.5e-23 113.6 128 50.0
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 4.9e-22 108.6 206 36.4
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 6.5e-22 108.2 86 65.1
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 1.6e-20 103.6 118 49.2
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.6e-20 103.6 118 49.2
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.1e-20 103.2 74 70.3
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 1.3e-19 100.5 63 76.2
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 5.7e-18 95.1 80 58.8
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 4.8e-17 92.0 90 52.2
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 8.2e-17 91.3 80 55.0
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 3.1e-16 89.4 80 53.8
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 4.1e-16 89.0 268 28.0
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 5.8e-15 85.1 80 51.2
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 3.5e-12 75.9 196 31.1
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.6e-12 75.5 60 63.3
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 2.3e-11 73.2 77 46.8
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 3.0e-11 72.8 54 66.7
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 8.7e-11 71.2 51 70.6
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 2.9e-06 56.2 39 66.7


User provided reference genes

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