Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01485 Selenicereus undatus HOM05D000370 ORTHO05D007897 1.6e-159 566.2 321 100.0
AUR62029224 Chenopodium quinoa HOM05D000370 ORTHO05D007897 5.8e-45 185.7 219 52.1
Ah.01g003070 Amaranthus hybridus HOM05D000370 ORTHO05D007897 4.9e-44 182.6 230 48.3
EL10Ac9g22558 Beta vulgaris HOM05D000370 ORTHO05D007897 7.1e-43 178.7 218 49.5
TAR633G2450 Trochodendron aralioides HOM05D000370 ORTHO05D007897 6.6e-33 145.6 218 41.3
Eucgr.B02529 Eucalyptus grandis HOM05D000370 ORTHO05D007897 1.6e-31 141.0 215 40.9
Gohir.A05G105700 Gossypium hirsutum HOM05D000370 ORTHO05D007897 2.8e-31 140.2 210 41.0
Gohir.D05G105700 Gossypium hirsutum HOM05D000370 ORTHO05D007897 2.8e-31 140.2 210 40.0
Manes.11G148700 Manihot esculenta HOM05D000370 ORTHO05D007897 3.6e-31 139.8 215 41.4
QL01p020989 Quercus lobata HOM05D000370 ORTHO05D007897 6.2e-31 139.0 214 42.1
Thecc.09G345300 Theobroma cacao HOM05D000370 ORTHO05D007897 6.2e-31 139.0 213 39.4
Gorai.009G109700 Gossypium raimondii HOM05D000370 ORTHO05D007897 8.1e-31 138.7 210 40.0
Oeu001295.2 Olea europaea HOM05D000370 ORTHO05D007897 1.8e-30 137.5 215 42.3
Potri.009G009500 Populus trichocarpa HOM05D000370 ORTHO05D007897 3.1e-30 136.7 214 40.2
Ciclev10028060m.g Citrus clementina HOM05D000370 ORTHO05D007897 4.0e-30 136.3 221 39.4
ECA238G4000 Erigeron canadensis HOM05D000370 ORTHO05D007897 8.9e-30 135.2 218 42.7
Lalb_Chr03g0027531 Lupinus albus HOM05D000370 ORTHO05D007897 2.0e-29 134.0 215 40.0
Nitab4.5_0004479g0050 Nicotiana tabacum HOM05D000370 ORTHO05D007897 2.6e-29 133.7 228 39.5
Actinidia24122 Actinidia chinensis HOM05D000370 ORTHO05D007897 3.4e-29 133.3 216 39.8
Nitab4.5_0002461g0010 Nicotiana tabacum HOM05D000370 ORTHO05D007897 3.4e-29 133.3 231 39.4
AUR62022772 Chenopodium quinoa HOM05D000370 ORTHO05D007897 1.7e-28 131.0 165 51.5
Medtr4g058015 Medicago truncatula HOM05D000370 ORTHO05D007897 2.2e-28 130.6 212 37.3
Cc01_g10800 Coffea canephora HOM05D000370 ORTHO05D007897 3.8e-28 129.8 222 40.1
PGR102G0321 Punica granatum HOM05D000370 ORTHO05D007897 6.4e-28 129.0 270 37.4
CiPaw.14G085600 Carya illinoinensis HOM05D000370 ORTHO05D007897 1.1e-27 128.3 214 41.6
Psat0s1086g0040 Pisum sativum HOM05D000370 ORTHO05D007897 1.1e-27 128.3 224 37.1
Lalb_Chr19g0137111 Lupinus albus HOM05D000370 ORTHO05D007897 5.4e-27 125.9 223 36.3
TWI75G0736 Tripterygium wilfordii HOM05D000370 ORTHO05D007897 9.3e-27 125.2 227 41.0
HanXRQChr15g0468631 Helianthus annuus HOM05D000370 ORTHO05D007897 2.7e-26 123.6 210 41.0
vmacro03220 Vaccinium macrocarpon HOM05D000370 ORTHO05D007897 3.5e-26 123.2 232 39.2
GSVIVG01025228001 Vitis vinifera HOM05D000370 ORTHO05D007897 4.6e-26 122.9 223 34.5
DCAR_022755 Daucus carota HOM05D000370 ORTHO05D007897 6.0e-26 122.5 220 39.5
Lsat_1_v5_gn_2_99800 Lactuca sativa HOM05D000370 ORTHO05D007897 6.0e-26 122.5 210 40.5
COL.COLO4_18293 Corchorus olitorius HOM05D000370 ORTHO05D007897 7.8e-26 122.1 213 36.2
Phvul.011G082300 Phaseolus vulgaris HOM05D000370 ORTHO05D007897 1.0e-25 121.7 215 35.8
Glyma.11G196200 Glycine max HOM05D000370 ORTHO05D007897 1.7e-25 120.9 232 34.1
Cfa011288 Carpinus fangiana HOM05D000370 ORTHO05D007897 5.1e-25 119.4 247 34.8
Oeu049261.1 Olea europaea HOM05D000370 ORTHO05D007897 6.6e-25 119.0 185 41.6
Dinv32703 Davidia involucrata HOM05D000370 ORTHO05D007897 1.1e-24 118.2 219 37.0
QL01p020971 Quercus lobata HOM05D001475 ORTHO05D007897 1.1e-24 118.2 187 41.2
Duzib170G1063 Durio zibethinus HOM05D000370 ORTHO05D007897 1.5e-24 117.9 213 35.2
Rhsim13G0097800 Rhododendron simsii HOM05D000370 ORTHO05D007897 1.9e-24 117.5 214 40.7
CSS0019527 Camellia sinensis var. sinensis HOM05D000370 ORTHO05D007897 4.3e-24 116.3 220 36.8
Lj3g0004104 Lotus japonicus HOM05D000370 ORTHO05D007897 5.6e-24 115.9 218 39.9
VMungo1127G1438 Vigna mungo HOM05D000370 ORTHO05D007897 5.6e-24 115.9 214 36.0
FvH4_3g31550 Fragaria vesca HOM05D000370 ORTHO05D007897 1.6e-23 114.4 219 38.8
Atru.chr3.3589 Acer truncatum HOM05D000370 ORTHO05D007897 2.1e-23 114.0 223 37.7
FAN25G3329 Fragaria x ananassa HOM05D000370 ORTHO05D007897 2.8e-23 113.6 219 38.4
RcHm_v2.0_Chr5g0058191 Rosa chinensis HOM05D000370 ORTHO05D007897 3.6e-23 113.2 214 37.4
Cpa.g.sc65.12 Carica papaya HOM05D000370 ORTHO05D007897 1.1e-22 111.7 212 34.4
FAN11G2829 Fragaria x ananassa HOM05D000370 ORTHO05D007897 1.1e-22 111.7 218 38.5
MSTRG.17784 Avicennia marina HOM05D000370 ORTHO05D007897 2.4e-22 110.5 256 32.8
CAN.G631.54 Capsicum annuum HOM05D000370 ORTHO05D007897 2.4e-22 110.5 232 42.7
ClCG03G002850 Citrullus lanatus HOM05D000370 ORTHO05D007897 2.4e-22 110.5 220 43.2
Prupe.6G106400 Prunus persica HOM05D000370 ORTHO05D007897 2.4e-22 110.5 214 36.0
TPR.G6154 Trifolium pratense HOM05D000370 ORTHO05D007897 2.4e-22 110.5 218 32.6
CsaV3_1G013760 Cucumis sativus L. HOM05D000370 ORTHO05D007897 3.1e-22 110.2 222 40.5
MD03G1123800 Malus domestica HOM05D000370 ORTHO05D007897 9.0e-22 108.6 222 36.9
HanXRQChr14g0452621 Helianthus annuus HOM05D000370 ORTHO05D007897 1.2e-21 108.2 218 36.7
PSO339G2940 Papaver somniferum HOM05D000370 ORTHO05D007897 2.6e-21 107.1 225 32.9
SalBow3G1450 Salvia bowleyana HOM05D000370 ORTHO05D007897 2.6e-21 107.1 210 36.7
Nn2g11537 Nelumbo nucifera HOM05D000370 ORTHO05D007897 4.4e-21 106.3 226 34.1
Gohir.A13G231400 Gossypium hirsutum HOM05D000370 ORTHO05D007897 7.6e-21 105.5 166 40.4
CANSAT54G0840 Cannabis sativa HOM05D000370 ORTHO05D007897 2.2e-20 104.0 232 37.1
Gohir.D13G237000 Gossypium hirsutum HOM05D000370 ORTHO05D007897 4.9e-20 102.8 200 36.0
MSTRG.18677 Avicennia marina HOM05D000370 ORTHO05D007897 1.1e-19 101.7 217 33.6
Gorai.013G267700 Gossypium raimondii HOM05D000370 ORTHO05D007897 1.4e-19 101.3 166 38.6
Sopen11g028440 Solanum pennellii HOM05D000370 ORTHO05D007897 1.4e-19 101.3 214 35.5
Migut.D02250 Erythranthe guttata HOM05D000370 ORTHO05D007897 2.4e-19 100.5 203 39.9
Solyc11g069840.3 Solanum lycopersicum HOM05D000370 ORTHO05D007897 2.1e-18 97.4 225 35.6
arahy.Tifrunner.gnm1.ann1.S6LFZW Arachis hypogaea HOM05D000370 ORTHO05D007897 2.7e-18 97.1 257 33.5
Sed0018954 Sechium edule HOM05D000370 ORTHO05D007897 4.6e-18 96.3 207 37.2
Glyma.12G077900 Glycine max HOM05D000370 ORTHO05D007897 1.0e-17 95.1 195 34.4
SGA_v2.0_scaffold263G46011 Striga asiatica HOM05D000370 ORTHO05D007897 1.7e-17 94.4 213 39.9
arahy.Tifrunner.gnm1.ann1.3I432B Arachis hypogaea HOM05D000370 ORTHO05D007897 2.3e-17 94.0 243 32.9
Sabra09G0005700 Salix brachista HOM05D000370 ORTHO05D007897 1.1e-16 91.7 198 40.4
Haze_23772 Corylus avellana HOM05D000370 ORTHO05D007897 1.9e-16 90.9 162 35.8
MELO3C004930.2 Cucumis melo HOM05D000370 ORTHO05D007897 1.9e-16 90.9 195 36.4
FAN21G0905 Fragaria x ananassa HOM05D000370 ORTHO05D007897 4.3e-16 89.7 190 36.8
Aqoxy1G01185 Aquilegia oxysepala HOM05D000370 ORTHO05D007897 7.3e-16 89.0 198 31.8
BcaC01g06552 Brassica carinata HOM05D000370 ORTHO05D007897 2.8e-15 87.0 241 29.9
C03p12730 Brassica napus HOM05D000370 ORTHO05D007897 2.8e-15 87.0 241 29.9
BolC3t13739H Brassica oleracea HOM05D000370 ORTHO05D007897 2.8e-15 87.0 241 29.9
THA.LOC104810866 Tarenaya hassleriana HOM05D000370 ORTHO05D007897 2.8e-15 87.0 251 32.3
PGSC0003DMG400008047 Solanum tuberosum HOM05D000370 ORTHO05D007897 3.6e-15 86.7 205 36.1
MD11G1140800 Malus domestica HOM05D000370 ORTHO05D007897 1.4e-14 84.7 215 33.5
BcaB01g04670 Brassica carinata HOM05D000370 ORTHO05D007897 1.8e-14 84.3 241 29.9
A03p11040 Brassica napus HOM05D000370 ORTHO05D007897 3.1e-14 83.6 241 29.5
BraA03t10418Z Brassica rapa HOM05D000370 ORTHO05D007897 3.1e-14 83.6 241 29.5
Lj2A1018T30 Lonicera japonica HOM05D000370 ORTHO05D007897 4.0e-14 83.2 157 40.8
PSO063G3328 Papaver somniferum HOM05D000370 ORTHO05D007897 4.0e-14 83.2 203 31.0
Sc06g0010380 Simmondsia chinensis HOM05D000370 ORTHO05D007897 4.0e-14 83.2 207 40.6
ATR0680G070 Amborella trichopoda HOM05D000370 ORTHO05D007897 5.3e-14 82.8 157 33.8
CARHR274400 Cardamine hirsuta HOM05D000370 ORTHO05D007897 2.0e-13 80.9 242 30.2
Thhalv10012852m.g Eutrema salsugineum HOM05D000370 ORTHO05D007897 2.0e-13 80.9 248 29.4
AT5G60720 Arabidopsis thaliana HOM05D000370 ORTHO05D007897 3.4e-13 80.1 246 29.3
A10p17960 Brassica napus HOM05D000620 ORTHO05D000537 7.6e-13 79.0 243 29.2
AL8G37310 Arabidopsis lyrata HOM05D000370 ORTHO05D007897 1.7e-12 77.8 246 28.5
BraA10t43871Z Brassica rapa HOM05D000370 ORTHO05D007897 1.7e-12 77.8 243 29.2
Sp6g22290 Schrenkiella parvula HOM05D000370 ORTHO05D007897 2.9e-12 77.0 244 29.9
HPP92_008480 Vanilla planifolia HOM05D000370 ORTHO05D007897 3.8e-12 76.6 201 30.8
Carub.0008s2140 Capsella rubella HOM05D000370 ORTHO05D007897 4.2e-11 73.2 89 46.1
BcaB08g36376 Brassica carinata HOM05D000370 ORTHO05D007897 4.6e-10 69.7 247 27.5
Glyma.17G156702 Glycine max HOM05D000370 ORTHO05D007897 6.7e-09 65.9 77 45.5
Actinidia14064 Actinidia chinensis HOM05D000370 ORTHO05D007897 1.5e-08 64.7 75 44.0
Zm00001eb210350 Zea mays HOM05D000370 ORTHO05D007897 2.5e-08 63.9 94 41.5
Peaxi162Scf00115g00122 Petunia axillaris HOM05D000370 ORTHO05D007897 3.3e-08 63.5 163 36.2
Aa31LG1G12680 Aethionema arabicum HOM05D000370 ORTHO05D007897 2.1e-07 60.8 245 24.1
CANSAT25G0661 Cannabis sativa HOM05D000370 ORTHO05D001366 2.4e-06 57.4 88 37.5
SalBow3G3578 Salvia bowleyana HOM05D000370 ORTHO05D007897 3.1e-06 57.0 123 35.0
THA.LOC104803390 Tarenaya hassleriana HOM05D000370 ORTHO05D001366 3.1e-06 57.0 85 36.5
Gohir.D05G203300 Gossypium hirsutum HOM05D000370 ORTHO05D001366 4.0e-06 56.6 105 29.5
Gorai.009G209300 Gossypium raimondii HOM05D000370 ORTHO05D001366 4.0e-06 56.6 105 29.5
MD15G1087500 Malus domestica HOM05D000370 ORTHO05D001366 4.0e-06 56.6 86 36.0
Os03g0859900 Oryza sativa ssp. japonica HOM05D000370 ORTHO05D007897 6.9e-06 55.8 158 31.0


User provided reference genes

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