Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 6.4e-88 327.4 167 100.0
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 3.4e-25 119.0 114 57.9
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 4.5e-25 118.6 79 74.7
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 5.0e-24 115.2 78 74.4
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 1.1e-23 114.0 113 57.5
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.4e-23 113.6 114 58.8
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 2.5e-23 112.8 78 70.5
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 3.2e-23 112.5 113 54.9
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 9.4e-23 110.9 80 70.0
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.2e-22 110.5 81 69.1
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 1.6e-22 110.2 77 71.4
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 2.7e-22 109.4 113 54.9
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 2.7e-22 109.4 77 70.1
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 2.7e-22 109.4 78 70.5
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 3.6e-22 109.0 78 70.5
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 3.6e-22 109.0 77 70.1
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 4.7e-22 108.6 78 64.1
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 4.7e-22 108.6 84 67.9
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 4.7e-22 108.6 77 70.1
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 4.7e-22 108.6 80 67.5
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 4.7e-22 108.6 77 70.1
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 6.1e-22 108.2 81 66.7
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 6.1e-22 108.2 81 66.7
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 6.1e-22 108.2 77 70.1
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 8.0e-22 107.8 78 67.9
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 1.0e-21 107.5 78 64.1
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 1.4e-21 107.1 78 61.5
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 1.8e-21 106.7 80 67.5
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.8e-21 106.7 77 68.8
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 1.8e-21 106.7 77 64.9
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 1.8e-21 106.7 78 69.2
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 1.8e-21 106.7 113 52.2
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 2.3e-21 106.3 77 66.2
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 2.3e-21 106.3 114 55.3
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 3.0e-21 105.9 112 51.8
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 3.0e-21 105.9 80 66.2
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 5.2e-21 105.1 86 59.3
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 6.7e-21 104.8 113 52.2
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 6.7e-21 104.8 78 67.9
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 8.8e-21 104.4 81 64.2
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 8.8e-21 104.4 81 64.2
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 8.8e-21 104.4 84 60.7
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 1.5e-20 103.6 81 63.0
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.5e-20 103.6 81 66.7
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 1.5e-20 103.6 78 65.4
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.6e-20 102.8 76 65.8
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 2.6e-20 102.8 78 66.7
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 2.6e-20 102.8 78 66.7
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 3.3e-20 102.4 77 66.2
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 3.3e-20 102.4 84 60.7
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 3.3e-20 102.4 86 61.6
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 3.3e-20 102.4 77 68.8
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 4.4e-20 102.1 84 59.5
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 4.4e-20 102.1 77 64.9
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 5.7e-20 101.7 78 64.1
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 5.7e-20 101.7 78 66.7
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 7.4e-20 101.3 78 64.1
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 7.4e-20 101.3 77 62.3
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 9.7e-20 100.9 84 58.3
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 9.7e-20 100.9 79 67.1
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 9.7e-20 100.9 79 65.8
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.3e-19 100.5 80 62.5
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 1.7e-19 100.1 80 61.2
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.7e-19 100.1 80 61.2
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 2.2e-19 99.8 80 60.0
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 2.2e-19 99.8 81 64.2
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 2.8e-19 99.4 81 60.5
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 2.8e-19 99.4 80 63.8
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 2.8e-19 99.4 77 64.9
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 2.8e-19 99.4 87 60.9
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 2.8e-19 99.4 110 50.9
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 2.8e-19 99.4 77 66.2
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 3.7e-19 99.0 80 58.8
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 3.7e-19 99.0 80 58.8
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 3.7e-19 99.0 77 59.7
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 3.7e-19 99.0 78 61.5
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 3.7e-19 99.0 80 60.0
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 4.8e-19 98.6 78 61.5
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 4.8e-19 98.6 67 74.6
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 6.3e-19 98.2 81 60.5
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 6.3e-19 98.2 78 61.5
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 8.2e-19 97.8 82 56.1
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 1.1e-18 97.4 81 59.3
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 1.4e-18 97.1 82 56.1
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 1.8e-18 96.7 80 58.8
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 3.1e-18 95.9 77 63.6
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 4.1e-18 95.5 82 54.9
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 5.3e-18 95.1 77 63.6
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 7.0e-18 94.7 77 63.6
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 9.1e-18 94.4 65 70.8
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 2.0e-17 93.2 78 56.4
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 2.0e-17 93.2 76 61.8
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 2.6e-17 92.8 80 57.5
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 3.5e-17 92.4 77 62.3
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 4.5e-17 92.0 77 62.3
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 1.0e-16 90.9 90 58.9
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 6.5e-16 88.2 64 68.8
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 8.5e-16 87.8 77 57.1
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 2.5e-15 86.3 71 59.2
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 3.2e-15 85.9 71 64.8
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 5.5e-15 85.1 63 63.5
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 2.3e-13 79.7 80 53.8
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 5.2e-13 78.6 122 42.6
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 8.8e-13 77.8 65 56.9
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 1.2e-12 77.4 122 41.8
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 7.5e-12 74.7 78 50.0
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.1e-10 70.9 95 44.2
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 2.0e-09 66.6 49 59.2
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 4.5e-09 65.5 76 47.4
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 4.5e-09 65.5 81 45.7
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 1.9e-07 60.1 85 44.7
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 2.1e-06 56.6 103 35.9


User provided reference genes

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