Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.9e-283 978.4 470 100.0
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.6e-147 526.2 471 58.6
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.0e-146 524.2 515 54.8
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.2e-138 496.5 459 56.6
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.0e-135 487.6 426 59.9
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 2.5e-129 466.5 420 57.6
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.0e-127 459.5 418 55.7
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 4.0e-127 459.1 405 56.3
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 3.3e-126 456.1 421 57.2
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 4.8e-125 452.2 400 57.5
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.8e-124 450.3 447 53.2
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 3.1e-124 449.5 422 55.2
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 4.1e-124 449.1 418 55.7
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.1e-124 449.1 418 56.0
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 1.2e-123 447.6 429 54.3
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 2.7e-123 446.4 417 55.9
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.5e-123 445.7 478 51.3
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 3.2e-121 439.5 417 54.7
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 7.2e-121 438.3 410 54.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.2e-120 437.6 400 56.0
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 2.1e-120 436.8 509 49.1
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.7e-120 436.4 436 53.7
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.7e-120 436.4 415 54.7
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 4.7e-120 435.6 418 54.5
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 6.1e-120 435.3 429 53.4
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 1.0e-119 434.5 417 54.7
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.8e-119 433.7 422 53.3
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 4.0e-119 432.6 425 55.1
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 6.8e-119 431.8 399 55.1
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 2.0e-118 430.3 452 51.3
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 3.4e-118 429.5 394 55.1
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 5.7e-118 428.7 396 55.3
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 5.7e-118 428.7 400 54.5
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 5.7e-118 428.7 394 54.6
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 9.8e-118 427.9 427 54.1
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 9.8e-118 427.9 420 52.4
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.3e-117 427.6 476 49.6
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.7e-117 427.2 400 54.8
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.2e-117 426.8 396 55.1
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 2.8e-117 426.4 450 51.8
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 4.8e-117 425.6 400 53.8
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 4.8e-117 425.6 400 53.8
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 4.8e-117 425.6 406 54.4
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 8.3e-117 424.9 400 53.2
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 8.3e-117 424.9 400 53.2
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 8.3e-117 424.9 398 53.8
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 8.3e-117 424.9 398 55.3
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.8e-116 423.7 400 54.2
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.4e-116 423.3 400 53.2
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 3.1e-116 422.9 465 51.0
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 5.4e-116 422.2 413 53.3
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 7.0e-116 421.8 401 53.6
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 7.0e-116 421.8 400 54.0
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 7.0e-116 421.8 395 54.2
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 7.0e-116 421.8 399 53.9
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 1.6e-115 420.6 418 51.9
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.6e-115 420.6 454 49.6
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.5e-115 419.5 393 53.9
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.0e-114 417.9 439 51.3
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.0e-114 417.9 396 54.8
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 1.3e-114 417.5 399 53.9
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 3.3e-113 412.9 423 52.7
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 7.2e-113 411.8 444 50.5
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.8e-111 407.1 395 52.7
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.8e-111 407.1 418 50.0
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 2.3e-111 406.8 452 47.8
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 6.8e-111 405.2 399 53.1
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.5e-110 404.1 407 50.9
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 7.5e-110 401.7 394 53.8
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.8e-109 399.8 400 52.2
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 4.9e-109 399.1 392 52.3
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.1e-108 397.9 430 52.3
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.8e-103 380.6 464 46.1
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.2e-102 377.9 396 49.5
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 8.3e-101 371.7 393 49.1
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 4.1e-100 369.4 396 48.2
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.2e-99 367.9 395 48.4
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 1.1e-97 361.3 520 43.1
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 6.2e-96 355.5 418 47.6
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.1e-95 354.8 419 47.5
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 6.8e-95 352.1 416 46.4
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.2e-94 351.3 420 46.9
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.4e-92 344.4 410 47.1
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 7.1e-92 342.0 437 45.3
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 6.0e-91 339.0 445 44.5
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.3e-90 337.8 345 51.9
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 3.6e-88 329.7 328 50.9
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.3e-87 327.0 328 49.7
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 5.2e-87 325.9 336 50.3
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 7.5e-86 322.0 398 44.7
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 3.3e-81 306.6 308 51.0
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 2.8e-80 303.5 316 50.6
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 8.9e-79 298.5 297 52.5
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 9.6e-73 278.5 385 41.0
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 8.1e-72 275.4 406 41.4
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.9e-68 264.2 165 70.3
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 5.4e-68 262.7 385 38.4
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 5.4e-68 262.7 356 40.2
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.7e-67 260.4 168 69.0
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 4.6e-67 259.6 507 35.3
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.4e-60 238.0 358 39.7
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 2.4e-60 237.3 386 36.8
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.6e-35 154.8 136 55.1
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 3.3e-33 147.1 103 67.0
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.0e-26 125.6 101 59.4
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.4e-26 125.2 76 73.7
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.5e-20 103.2 75 68.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.4e-15 87.8 101 45.5
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 8.0e-11 72.8 58 63.8
Hund03349 Selenicereus undatus HOM05D001033 ORTHO05D002045 1.4e-10 72.0 42 73.8
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.3e-10 71.2 54 61.1
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.0e-10 70.5 44 70.5
Hund11452 Selenicereus undatus HOM05D001869 ORTHO05D002013 5.2e-10 70.1 40 77.5
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 5.4e-07 60.1 49 57.1
Hund25551 Selenicereus undatus HOM05D003350 ORTHO05D003947 4.5e-06 57.0 38 68.4


User provided reference genes

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