Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.1e-116 423.3 223 100.0
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 4.4e-76 288.5 223 70.4
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 5.7e-76 288.1 223 69.5
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 9.8e-76 287.3 223 68.6
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 1.4e-74 283.5 228 67.5
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 1.6e-73 280.0 223 68.2
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.0e-72 277.3 225 68.4
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 2.3e-72 276.2 222 68.5
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 8.6e-72 274.2 219 67.6
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.9e-71 273.1 235 63.4
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 2.5e-71 272.7 224 66.5
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 5.6e-71 271.6 224 66.1
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 7.3e-71 271.2 241 65.6
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.6e-70 270.0 224 67.0
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 3.6e-70 268.9 198 70.7
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 8.0e-70 267.7 223 67.3
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.4e-69 266.9 224 66.1
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.8e-69 266.5 218 65.1
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 3.0e-69 265.8 223 64.6
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 6.8e-69 264.6 221 66.1
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 6.8e-69 264.6 224 65.2
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 2.6e-68 262.7 214 67.3
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 3.4e-68 262.3 207 67.6
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 7.5e-68 261.2 223 62.3
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 7.5e-68 261.2 222 63.5
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 9.8e-68 260.8 207 67.6
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 1.3e-67 260.4 226 64.2
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 1.7e-67 260.0 221 64.7
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.7e-67 260.0 236 61.9
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 4.9e-67 258.5 221 64.3
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 6.4e-67 258.1 231 61.9
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 8.3e-67 257.7 228 61.8
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 8.3e-67 257.7 224 62.9
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.1e-66 257.3 224 61.6
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 1.4e-66 256.9 226 61.5
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 1.8e-66 256.5 222 61.3
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 3.2e-66 255.8 192 70.3
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 5.4e-66 255.0 225 63.1
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 7.0e-66 254.6 178 73.6
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 9.2e-66 254.2 224 61.6
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 1.2e-65 253.8 232 63.4
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.2e-65 253.8 221 65.2
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 1.6e-65 253.4 224 61.6
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 1.6e-65 253.4 226 61.9
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 1.6e-65 253.4 223 63.2
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 2.0e-65 253.1 180 73.9
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 3.5e-65 252.3 224 61.2
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 3.5e-65 252.3 216 62.0
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 3.5e-65 252.3 216 62.0
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 4.6e-65 251.9 224 61.2
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 4.6e-65 251.9 224 62.5
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 4.6e-65 251.9 213 64.8
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 1.7e-64 250.0 230 60.0
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 3.0e-64 249.2 213 63.8
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 3.9e-64 248.8 203 66.0
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 6.6e-64 248.1 189 68.8
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 1.5e-63 246.9 224 62.9
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.5e-63 246.9 192 67.7
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 2.5e-63 246.1 194 66.5
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 2.5e-63 246.1 229 60.3
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 3.3e-63 245.7 224 63.4
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 3.3e-63 245.7 205 64.9
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 4.3e-63 245.4 224 62.5
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 5.6e-63 245.0 221 61.1
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 2.8e-62 242.7 208 61.5
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 3.6e-62 242.3 226 60.2
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 3.6e-62 242.3 232 59.1
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 4.7e-62 241.9 234 57.7
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 4.7e-62 241.9 301 50.5
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 4.7e-62 241.9 232 59.1
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 6.2e-62 241.5 162 75.3
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 8.0e-62 241.1 222 60.4
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.8e-61 240.0 232 58.6
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.5e-60 236.9 167 73.7
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 2.6e-60 236.1 208 60.6
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 4.4e-60 235.3 222 59.5
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 5.8e-60 235.0 200 62.0
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 9.8e-60 234.2 169 72.8
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.7e-59 232.3 166 72.9
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.1e-58 230.7 164 70.7
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 1.9e-58 229.9 203 61.6
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 1.2e-57 227.3 220 57.7
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 2.0e-57 226.5 164 70.1
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.6e-56 221.1 164 70.7
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 3.3e-55 219.2 168 67.3
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 5.6e-55 218.4 224 54.9
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 3.6e-54 215.7 160 71.9
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 6.2e-54 214.9 193 59.6
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 1.1e-53 214.2 207 58.9
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.4e-53 213.8 230 56.1
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 2.3e-53 213.0 176 65.3
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 5.2e-53 211.8 169 67.5
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 7.5e-52 208.0 196 59.2
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.9e-50 203.4 160 66.2
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 3.2e-50 202.6 161 64.0
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.5e-47 193.7 230 53.5
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 2.1e-46 189.9 159 62.3
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.1e-45 187.6 166 59.0
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 4.0e-45 185.7 219 49.3
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 7.1e-42 174.9 132 71.2
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 1.2e-36 157.5 197 46.7
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 2.6e-36 156.4 93 81.7
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 3.4e-36 156.0 213 50.2
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.9e-31 140.2 156 55.8
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 4.8e-30 135.6 82 79.3
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.4e-29 134.0 80 80.0
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.8e-29 133.7 185 42.7
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.0e-29 132.5 124 62.9
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.6e-28 129.8 190 42.6
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 8.7e-24 114.8 181 41.4
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 1.1e-23 114.4 113 53.1
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.1e-22 110.2 67 76.1
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 6.2e-22 108.6 73 72.6
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 3.8e-19 99.4 75 66.7
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 4.9e-19 99.0 248 31.9
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.9e-16 89.4 90 56.7
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 5.6e-15 85.5 68 67.6
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 4.5e-12 75.9 104 45.2
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 1.6e-09 67.4 56 57.1
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 4.6e-09 65.9 66 47.0
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.3e-08 64.3 93 50.5
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 4.3e-07 59.3 106 36.8


User provided reference genes

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