Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 4.6e-144 514.6 271 100.0
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 4.3e-142 508.1 271 98.9
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 1.0e-79 300.8 272 62.1
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 2.3e-79 299.7 273 62.6
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 3.9e-79 298.9 272 61.0
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 6.7e-79 298.1 269 61.0
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 2.2e-77 293.1 269 58.0
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 6.3e-77 291.6 267 62.2
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 1.4e-76 290.4 257 63.0
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 3.1e-76 289.3 258 60.5
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 5.3e-76 288.5 261 60.5
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 5.3e-76 288.5 273 60.4
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 5.3e-76 288.5 273 60.4
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 1.6e-75 287.0 271 61.3
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 3.8e-74 282.3 269 60.2
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 7.2e-73 278.1 249 59.4
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 7.2e-73 278.1 249 59.4
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 7.2e-73 278.1 271 57.2
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 9.4e-73 277.7 264 58.7
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 4.0e-71 272.3 268 56.7
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 4.0e-71 272.3 256 57.4
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 1.2e-70 270.8 232 61.6
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 2.6e-70 269.6 255 60.0
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 9.7e-70 267.7 223 63.7
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 1.3e-69 267.3 224 63.8
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 1.3e-69 267.3 211 63.5
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 2.2e-69 266.5 224 62.9
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 1.1e-68 264.2 234 59.4
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 5.3e-68 261.9 247 59.9
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 7.0e-68 261.5 264 54.5
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 4.5e-67 258.8 256 56.2
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 1.3e-66 257.3 272 51.8
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 5.0e-66 255.4 253 56.1
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 1.9e-65 253.4 226 62.4
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 2.5e-65 253.1 264 53.8
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 9.4e-65 251.1 253 54.2
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 1.2e-64 250.8 236 57.2
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 1.2e-64 250.8 235 57.0
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 1.6e-64 250.4 235 57.9
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 6.1e-64 248.4 233 57.1
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 3.4e-62 242.7 215 60.0
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 5.7e-62 241.9 253 53.0
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 8.3e-61 238.0 262 52.7
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 8.3e-61 238.0 242 53.3
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 2.4e-60 236.5 246 53.3
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 9.1e-60 234.6 227 57.7
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 2.0e-59 233.4 243 51.9
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 2.7e-59 233.0 243 52.3
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 1.0e-58 231.1 247 51.4
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 1.0e-58 231.1 246 52.8
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 2.9e-58 229.6 243 51.0
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 6.6e-58 228.4 216 58.8
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 8.6e-58 228.0 237 54.9
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 1.5e-57 227.3 255 51.0
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 4.2e-57 225.7 260 53.1
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 2.8e-56 223.0 243 51.0
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 2.8e-56 223.0 249 51.8
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 3.6e-56 222.6 242 50.4
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 4.7e-56 222.2 242 51.2
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 6.8e-55 218.4 225 56.9
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 2.6e-54 216.5 272 47.4
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 8.3e-53 211.5 247 49.4
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 9.2e-52 208.0 193 57.0
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 7.8e-51 204.9 257 47.1
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 1.3e-50 204.1 265 47.5
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 2.9e-50 203.0 179 60.9
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 4.7e-48 195.7 256 46.9
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 2.4e-44 183.3 219 47.9
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 1.2e-43 181.0 183 54.6
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 3.9e-34 149.4 116 69.0
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 6.6e-34 148.7 230 39.1
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 8.3e-29 131.7 219 41.1
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 4.4e-22 109.4 122 44.3
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 3.2e-20 103.2 125 43.2
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 2.1e-16 90.5 245 29.8
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 2.1e-16 90.5 245 29.8
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 2.8e-16 90.1 243 28.8
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 8.1e-16 88.6 245 29.4
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 1.8e-15 87.4 244 28.7
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 4.0e-15 86.3 243 28.4
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 5.3e-15 85.9 211 31.3
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 6.9e-15 85.5 205 31.2
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 2.6e-14 83.6 246 28.5
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 2.6e-14 83.6 246 28.5
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 3.8e-13 79.7 215 34.4
C03p75300 Brassica napus HOM05D002526 ORTHO05D010157 3.0e-10 70.1 245 27.3
BolC3t19789H Brassica oleracea HOM05D002526 ORTHO05D010157 6.2e-08 62.4 84 39.3
AagrBONN_evm.TU.Sc2ySwM_117.3641 Anthoceros agrestis HOM05D000382 ORTHO05D000623 1.5e-06 57.8 212 23.6


User provided reference genes

Program Settings