Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 2.7e-144 515.4 271 100.0
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 3.3e-142 508.4 271 98.9
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 7.2e-81 304.7 272 62.9
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 6.1e-80 301.6 273 63.4
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 1.0e-79 300.8 272 61.4
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 1.1e-78 297.4 269 60.6
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 5.7e-78 295.0 269 58.4
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 4.8e-77 292.0 260 60.0
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 1.1e-76 290.8 260 61.2
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 2.4e-76 289.7 267 61.8
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 2.4e-76 289.7 273 60.4
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 2.4e-76 289.7 273 60.4
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 5.3e-76 288.5 251 63.7
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 1.6e-75 287.0 271 61.3
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 1.1e-73 280.8 260 58.5
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.1e-73 280.8 260 58.5
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 1.9e-73 280.0 269 59.9
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 2.5e-73 279.6 271 57.2
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 4.7e-72 275.4 264 58.3
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 1.0e-71 274.2 268 57.1
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 2.3e-71 273.1 256 57.4
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 1.5e-70 270.4 254 60.2
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 2.0e-70 270.0 211 64.0
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 4.4e-70 268.9 223 63.7
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 4.4e-70 268.9 232 61.2
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 7.5e-70 268.1 224 63.8
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 1.3e-69 267.3 224 62.9
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 6.3e-69 265.0 234 59.4
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 1.4e-68 263.8 247 60.3
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 1.2e-67 260.8 264 54.5
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 1.6e-67 260.4 229 62.0
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 2.2e-66 256.5 272 51.8
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 2.9e-66 256.1 253 56.1
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 8.5e-66 254.6 226 62.4
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 1.5e-65 253.8 264 54.2
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 2.5e-65 253.1 236 57.6
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 3.2e-65 252.7 229 58.5
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 4.2e-65 252.3 235 57.0
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 5.5e-65 251.9 235 57.9
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 2.1e-64 250.0 233 57.1
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 1.5e-62 243.8 253 53.4
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 2.0e-62 243.4 215 60.0
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 2.2e-61 240.0 242 53.7
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 2.8e-61 239.6 262 52.7
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 4.8e-61 238.8 246 53.7
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 3.1e-60 236.1 228 57.9
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 5.4e-60 235.3 243 52.7
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 1.2e-59 234.2 243 51.9
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 2.0e-59 233.4 247 51.8
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 2.0e-59 233.4 246 53.3
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 1.0e-58 231.1 216 59.3
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 1.3e-58 230.7 243 51.0
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 2.3e-58 229.9 237 55.3
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 8.6e-58 228.0 246 52.0
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 1.1e-57 227.6 259 53.7
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 1.6e-56 223.8 243 51.0
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 2.1e-56 223.4 242 50.4
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 2.1e-56 223.4 249 51.8
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 2.8e-56 223.0 242 51.2
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 8.9e-55 218.0 225 56.9
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 3.4e-54 216.1 272 47.4
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 1.7e-53 213.8 247 49.8
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.8e-52 210.3 204 55.9
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 4.5e-51 205.7 257 47.5
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 5.9e-51 205.3 237 50.2
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 2.9e-50 203.0 179 60.9
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 8.0e-48 194.9 256 47.3
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 4.1e-44 182.6 213 48.8
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 5.4e-44 182.2 183 55.2
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.7e-34 150.6 116 69.8
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 1.7e-34 150.6 230 39.6
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 8.3e-29 131.7 219 41.1
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 3.4e-22 109.8 122 44.3
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 2.4e-20 103.6 125 43.2
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 2.1e-16 90.5 243 28.8
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 2.1e-16 90.5 243 28.8
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 2.1e-16 90.5 243 28.8
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 8.1e-16 88.6 243 28.4
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 1.8e-15 87.4 244 28.7
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 3.1e-15 86.7 243 28.4
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 3.1e-15 86.7 205 31.2
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 3.1e-15 86.7 211 31.3
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 2.0e-14 84.0 246 28.5
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 2.0e-14 84.0 246 28.5
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 8.4e-13 78.6 215 34.0
C03p75300 Brassica napus HOM05D002526 ORTHO05D010157 2.3e-10 70.5 245 27.3
BolC3t19789H Brassica oleracea HOM05D002526 ORTHO05D010157 6.2e-08 62.4 84 39.3
AagrBONN_evm.TU.Sc2ySwM_117.3641 Anthoceros agrestis HOM05D000382 ORTHO05D000623 1.5e-06 57.8 212 23.6


User provided reference genes

Program Settings