Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00643 Selenicereus undatus HOM05D003870 ORTHO05D004567 3.8e-76 288.1 147 100.0
Ah.01g021620 Amaranthus hybridus HOM05D003870 ORTHO05D004567 7.9e-58 227.3 147 81.6
AUR62011659 Chenopodium quinoa HOM05D003870 ORTHO05D004567 2.3e-57 225.7 147 81.0
Nitab4.5_0002859g0140 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.7e-55 219.5 147 76.9
Prupe.3G067400 Prunus persica HOM05D003870 ORTHO05D004567 3.7e-55 218.4 147 78.2
PGSC0003DMG400002626 Solanum tuberosum HOM05D003870 ORTHO05D004567 6.3e-55 217.6 147 77.6
Manes.11G038100 Manihot esculenta HOM05D003870 ORTHO05D004567 1.1e-54 216.9 147 76.9
Nitab4.5_0001315g0130 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.1e-54 216.9 147 75.5
GSVIVG01017071001 Vitis vinifera HOM05D003870 ORTHO05D004567 1.1e-54 216.9 147 77.6
Nitab4.5_0000351g0060 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.4e-54 216.5 147 76.2
Glyma.07G019700 Glycine max HOM05D003870 ORTHO05D004567 1.8e-54 216.1 147 78.9
EL10Ac9g22029 Beta vulgaris HOM05D003870 ORTHO05D004567 3.1e-54 215.3 147 77.6
Nn3g18073 Nelumbo nucifera HOM05D003870 ORTHO05D004567 3.1e-54 215.3 147 76.2
Glyma.08G204800 Glycine max HOM05D003870 ORTHO05D004567 4.1e-54 214.9 147 78.2
VMungo0331G0764 Vigna mungo HOM05D003870 ORTHO05D004567 4.1e-54 214.9 147 77.6
Nitab4.5_0018837g0020 Nicotiana tabacum HOM05D003870 ORTHO05D004567 5.3e-54 214.5 147 75.5
THA.LOC104810527 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 5.3e-54 214.5 147 74.8
FvH4_6g31740 Fragaria vesca HOM05D003870 ORTHO05D004567 9.1e-54 213.8 147 76.9
FAN14G2389 Fragaria x ananassa HOM05D003870 ORTHO05D004567 9.1e-54 213.8 147 76.9
FAN05G2130 Fragaria x ananassa HOM05D003870 ORTHO05D004567 1.2e-53 213.4 147 76.9
Dinv38024 Davidia involucrata HOM05D003870 ORTHO05D004567 1.5e-53 213.0 147 76.2
FAN02G0928 Fragaria x ananassa HOM05D003870 ORTHO05D004567 1.5e-53 213.0 147 76.9
Manes.04G129900 Manihot esculenta HOM05D003870 ORTHO05D004567 2.0e-53 212.6 147 76.2
CANSAT56G1465 Cannabis sativa HOM05D003870 ORTHO05D004567 2.6e-53 212.2 147 76.9
CAN.G1152.5 Capsicum annuum HOM05D003870 ORTHO05D004567 2.6e-53 212.2 147 73.5
Cc04_g03050 Coffea canephora HOM05D003870 ORTHO05D004567 2.6e-53 212.2 147 76.2
Gohir.A05G131700 Gossypium hirsutum HOM05D003870 ORTHO05D004567 2.6e-53 212.2 147 76.9
BraA08t32272Z Brassica rapa HOM05D003870 ORTHO05D004567 3.4e-53 211.8 147 74.1
Potri.003G052500 Populus trichocarpa HOM05D003870 ORTHO05D004567 3.4e-53 211.8 147 76.2
Solyc03g120640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 3.4e-53 211.8 147 76.2
arahy.Tifrunner.gnm1.ann1.71HCYD Arachis hypogaea HOM05D003870 ORTHO05D004567 4.5e-53 211.5 147 76.9
arahy.Tifrunner.gnm1.ann1.YBSA05 Arachis hypogaea HOM05D003870 ORTHO05D004567 4.5e-53 211.5 147 76.9
CAN.G438.27 Capsicum annuum HOM05D003870 ORTHO05D004567 4.5e-53 211.5 147 74.8
Gohir.D05G131200 Gossypium hirsutum HOM05D003870 ORTHO05D004567 4.5e-53 211.5 147 76.2
Gorai.009G134900 Gossypium raimondii HOM05D003870 ORTHO05D004567 4.5e-53 211.5 147 76.2
A08p02270 Brassica napus HOM05D003870 ORTHO05D004567 5.9e-53 211.1 147 74.1
CiPaw.01G235900 Carya illinoinensis HOM05D003870 ORTHO05D004567 5.9e-53 211.1 147 74.8
ClCG07G013150 Citrullus lanatus HOM05D003870 ORTHO05D004567 5.9e-53 211.1 147 75.5
Nitab4.5_0003418g0030 Nicotiana tabacum HOM05D003870 ORTHO05D004567 5.9e-53 211.1 147 74.1
PGSC0003DMG400007571 Solanum tuberosum HOM05D003870 ORTHO05D004567 5.9e-53 211.1 147 74.8
Duzib235G0817 Durio zibethinus HOM05D003870 ORTHO05D004567 7.7e-53 210.7 147 75.5
FAN09G1730 Fragaria x ananassa HOM05D003870 ORTHO05D004567 1.0e-52 210.3 147 75.5
Phvul.010G148800 Phaseolus vulgaris HOM05D003870 ORTHO05D004567 1.0e-52 210.3 147 76.9
AT1G52230 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 1.3e-52 209.9 147 72.1
BcaC01g01311 Brassica carinata HOM05D003870 ORTHO05D004567 1.3e-52 209.9 147 72.8
BcaC01g01313 Brassica carinata HOM05D003870 ORTHO05D004567 1.3e-52 209.9 147 72.8
CSS0035581 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 1.3e-52 209.9 147 74.8
Sp1g38770 Schrenkiella parvula HOM05D003870 ORTHO05D004567 1.3e-52 209.9 147 72.8
Peaxi162Scf00015g00032 Petunia axillaris HOM05D003870 ORTHO05D004567 1.7e-52 209.5 147 72.8
RcHm_v2.0_Chr2g0138931 Rosa chinensis HOM05D003870 ORTHO05D004567 1.7e-52 209.5 147 74.8
SGA_v2.0_scaffold5G02558 Striga asiatica HOM05D003870 ORTHO05D004567 1.7e-52 209.5 147 74.8
Aa31LG10G2680 Aethionema arabicum HOM05D003870 ORTHO05D004567 2.9e-52 208.8 147 72.8
MD09G1209500 Malus domestica HOM05D003870 ORTHO05D004567 2.9e-52 208.8 147 73.5
Nn2g11696 Nelumbo nucifera HOM05D003870 ORTHO05D004567 2.9e-52 208.8 147 74.8
Solyc06g066640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 2.9e-52 208.8 147 72.8
Aqoxy7G01609 Aquilegia oxysepala HOM05D003870 ORTHO05D004567 3.8e-52 208.4 147 75.5
CsaV3_3G025000 Cucumis sativus L. HOM05D003870 ORTHO05D004567 3.8e-52 208.4 147 74.8
Hma1.2p1_1195F.1_g265780 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 3.8e-52 208.4 147 74.1
Hma1.2p1_3147F.1_g333153 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 3.8e-52 208.4 147 74.1
PSO782G2129 Papaver somniferum HOM05D003870 ORTHO05D004567 3.8e-52 208.4 147 73.5
PSO832G3918 Papaver somniferum HOM05D003870 ORTHO05D004567 3.8e-52 208.4 147 73.5
PGR102G1204 Punica granatum HOM05D003870 ORTHO05D004567 3.8e-52 208.4 147 75.5
A06p01960 Brassica napus HOM05D003870 ORTHO05D004567 5.0e-52 208.0 147 72.1
BraA06t23412Z Brassica rapa HOM05D003870 ORTHO05D004567 5.0e-52 208.0 147 72.1
PGSC0003DMG400016504 Solanum tuberosum HOM05D003870 ORTHO05D004567 5.0e-52 208.0 147 72.1
BcaB04g18888 Brassica carinata HOM05D003870 ORTHO05D004567 6.5e-52 207.6 147 72.1
C06p07460 Brassica napus HOM05D003870 ORTHO05D004567 6.5e-52 207.6 147 71.4
BolC6t35835H Brassica oleracea HOM05D003870 ORTHO05D004567 6.5e-52 207.6 147 71.4
Cpa.g.sc1182.1 Carica papaya HOM05D003870 ORTHO05D004567 6.5e-52 207.6 147 74.1
Thecc.06G092200 Theobroma cacao HOM05D003870 ORTHO05D004567 8.5e-52 207.2 147 74.1
C03p90500 Brassica napus HOM05D003870 ORTHO05D004567 1.1e-51 206.8 147 71.4
BolC3t21374H Brassica oleracea HOM05D003870 ORTHO05D004567 1.1e-51 206.8 147 71.4
MELO3C012971.2 Cucumis melo HOM05D003870 ORTHO05D004567 1.1e-51 206.8 147 74.1
Sed0005638 Sechium edule HOM05D003870 ORTHO05D004567 1.1e-51 206.8 147 74.1
TAR383G0495 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.1e-51 206.8 147 74.8
Carub.0001s4120 Capsella rubella HOM05D003870 ORTHO05D004567 1.4e-51 206.5 147 71.4
Duzib160G0587 Durio zibethinus HOM05D003870 ORTHO05D004567 1.4e-51 206.5 147 74.1
Sp3g14500 Schrenkiella parvula HOM05D003870 ORTHO05D004567 1.4e-51 206.5 147 71.4
Sed0024359 Sechium edule HOM05D003870 ORTHO05D004567 1.9e-51 206.1 147 74.1
Solyc12g044280.2 Solanum lycopersicum HOM05D003870 ORTHO05D004567 1.9e-51 206.1 147 74.8
Sopen06g024910 Solanum pennellii HOM05D003870 ORTHO05D004567 1.9e-51 206.1 147 71.4
Sopen12g022520 Solanum pennellii HOM05D003870 ORTHO05D004567 1.9e-51 206.1 147 74.8
vmacro18888 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 1.9e-51 206.1 147 73.5
Actinidia21679 Actinidia chinensis HOM05D003870 ORTHO05D004567 2.5e-51 205.7 147 73.5
A01p37960 Brassica napus HOM05D003870 ORTHO05D004567 2.5e-51 205.7 147 71.4
Cfa002093 Carpinus fangiana HOM05D003870 ORTHO05D004567 2.5e-51 205.7 147 74.1
Haze_16364 Corylus avellana HOM05D003870 ORTHO05D004567 2.5e-51 205.7 147 74.1
Thhalv10011814m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 2.5e-51 205.7 147 71.4
Lj3g0012525 Lotus japonicus HOM05D003870 ORTHO05D004567 2.5e-51 205.7 151 74.8
Sabra03G0026800 Salix brachista HOM05D003870 ORTHO05D004567 2.5e-51 205.7 147 74.1
BraA01t03856Z Brassica rapa HOM05D003870 ORTHO05D004567 3.2e-51 205.3 147 71.4
TAR626G1423 Trochodendron aralioides HOM05D003870 ORTHO05D004567 3.2e-51 205.3 147 74.1
COL.COLO4_30434 Corchorus olitorius HOM05D003870 ORTHO05D004567 4.2e-51 204.9 147 73.5
DCAR_023061 Daucus carota HOM05D003870 ORTHO05D004567 4.2e-51 204.9 147 75.5
A05p33360 Brassica napus HOM05D003870 ORTHO05D004567 5.5e-51 204.5 147 70.7
BraA05t22161Z Brassica rapa HOM05D003870 ORTHO05D004567 5.5e-51 204.5 147 70.7
Eucgr.F03038 Eucalyptus grandis HOM05D003870 ORTHO05D004567 5.5e-51 204.5 146 72.6
Lalb_Chr14g0373231 Lupinus albus HOM05D003870 ORTHO05D004567 7.2e-51 204.1 147 75.5
Peaxi162Scf00034g00513 Petunia axillaris HOM05D003870 ORTHO05D004567 7.2e-51 204.1 144 74.3
SGA_v2.0_scaffold69G23361 Striga asiatica HOM05D003870 ORTHO05D004567 7.2e-51 204.1 147 73.5
TWI12G1021 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 7.2e-51 204.1 147 72.8
MSTRG.11054 Avicennia marina HOM05D003870 ORTHO05D004567 9.4e-51 203.8 147 74.1
BcaC05g28907 Brassica carinata HOM05D003870 ORTHO05D004567 9.4e-51 203.8 147 70.7
C05p50360 Brassica napus HOM05D003870 ORTHO05D004567 9.4e-51 203.8 147 70.7
BolC5t33784H Brassica oleracea HOM05D003870 ORTHO05D004567 9.4e-51 203.8 147 70.7
AT3G16140 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 1.2e-50 203.4 147 71.4
Ciclev10026722m.g Citrus clementina HOM05D003870 ORTHO05D004567 1.2e-50 203.4 147 73.5
Oeu029644.1 Olea europaea HOM05D003870 ORTHO05D004567 1.6e-50 203.0 147 72.1
QL05p021780 Quercus lobata HOM05D003870 ORTHO05D004567 1.6e-50 203.0 146 74.7
BcaB06g25707 Brassica carinata HOM05D003870 ORTHO05D004567 2.1e-50 202.6 147 70.1
CARHR042360 Cardamine hirsuta HOM05D003870 ORTHO05D004567 2.1e-50 202.6 147 70.7
MBI01_g07179_MAGBIO Magnolia biondii HOM05D003870 ORTHO05D004567 2.1e-50 202.6 147 72.1
THA.LOC104817982 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 2.1e-50 202.6 147 71.4
AL3G28820 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 2.7e-50 202.2 147 71.4
Thhalv10021715m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 2.7e-50 202.2 147 70.7
CARHR091300 Cardamine hirsuta HOM05D003870 ORTHO05D004567 3.6e-50 201.8 147 70.7
Psat5g298080 Pisum sativum HOM05D003870 ORTHO05D004567 3.6e-50 201.8 148 72.3
CSS0004601 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 4.7e-50 201.4 147 72.1
CSS0022866 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 4.7e-50 201.4 147 72.1
Lsat_1_v5_gn_5_130901 Lactuca sativa HOM05D003870 ORTHO05D004567 4.7e-50 201.4 147 73.5
Lalb_Chr25g0279971 Lupinus albus HOM05D003870 ORTHO05D004567 4.7e-50 201.4 147 70.7
Medtr2g101820 Medicago truncatula HOM05D003870 ORTHO05D004567 4.7e-50 201.4 149 74.5
Rhsim08G0223300 Rhododendron simsii HOM05D003870 ORTHO05D004567 4.7e-50 201.4 147 70.7
TWI75G1362 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 4.7e-50 201.4 147 71.4
Migut.D01017 Erythranthe guttata HOM05D003870 ORTHO05D004567 1.0e-49 200.3 147 72.8
Glyma.15G016300 Glycine max HOM05D003870 ORTHO05D004567 1.4e-49 199.9 147 73.5
TAR636G2531 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.8e-49 199.5 147 72.8
Carub.0003s1588 Capsella rubella HOM05D003870 ORTHO05D004567 2.3e-49 199.1 147 69.4
VMungo1080G1700 Vigna mungo HOM05D003870 ORTHO05D004567 3.0e-49 198.7 139 74.8
BcaB04g17164 Brassica carinata HOM05D003870 ORTHO05D004567 3.9e-49 198.4 145 69.7
Migut.I00942 Erythranthe guttata HOM05D003870 ORTHO05D004567 3.9e-49 198.4 147 72.1
Os05g0560000 Oryza sativa ssp. japonica HOM05D003870 ORTHO05D004567 3.9e-49 198.4 144 70.8
Zm00001eb295610 Zea mays HOM05D003870 ORTHO05D004567 3.9e-49 198.4 147 71.4
Sc15g0001350 Simmondsia chinensis HOM05D003870 ORTHO05D004567 5.1e-49 198.0 147 70.7
unitig_0.g2124 Utricularia gibba HOM05D003870 ORTHO05D004567 1.1e-48 196.8 147 70.1
AUR62016482 Chenopodium quinoa HOM05D003870 ORTHO05D004567 1.5e-48 196.4 147 74.1
HanXRQChr12g0360771 Helianthus annuus HOM05D003870 ORTHO05D004567 2.6e-48 195.7 147 70.7
CiPaw.02G148900 Carya illinoinensis HOM05D003870 ORTHO05D004567 4.4e-48 194.9 147 70.7
Nitab4.5_0001968g0090 Nicotiana tabacum HOM05D003870 ORTHO05D004567 4.4e-48 194.9 147 71.4
Glyma.13G357300 Glycine max HOM05D003870 ORTHO05D004567 7.4e-48 194.1 140 74.3
CDE02G4568 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 9.7e-48 193.7 147 69.4
vmacro16969 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 9.7e-48 193.7 147 70.7
Rhsim12G0200100 Rhododendron simsii HOM05D003870 ORTHO05D004567 2.8e-47 192.2 147 70.1
Eucgr.J02958 Eucalyptus grandis HOM05D003870 ORTHO05D004567 4.8e-47 191.4 147 70.1
ECA234G4669 Erigeron canadensis HOM05D003870 ORTHO05D004567 8.2e-47 190.7 147 70.1
Lsat_1_v5_gn_1_35241 Lactuca sativa HOM05D003870 ORTHO05D004567 4.1e-46 188.3 147 70.1
CDE04G3706 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 2.6e-45 185.7 147 66.7
Actinidia32731 Actinidia chinensis HOM05D003870 ORTHO05D004567 4.5e-45 184.9 130 73.8
Oeu024071.1 Olea europaea HOM05D003870 ORTHO05D004567 5.9e-45 184.5 138 69.6
ATR0315G019 Amborella trichopoda HOM05D003870 ORTHO05D004567 4.2e-43 178.3 147 67.3
AL1G60400 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 1.2e-42 176.8 103 81.6
SEGI_14279 Sequoiadendron giganteum HOM05D003870 ORTHO05D004567 1.6e-42 176.4 142 61.3
Sopen00g011820 Solanum pennellii HOM05D003870 ORTHO05D004567 2.3e-41 172.6 111 75.7
BcaC08g43379 Brassica carinata HOM05D003870 ORTHO05D004567 1.1e-40 170.2 102 79.4
TPR.G37200 Trifolium pratense HOM05D003870 ORTHO05D004567 5.7e-40 167.9 148 64.9
Pp3c9_19520 Physcomitrium patens HOM05D003870 ORTHO05D004567 1.1e-35 153.7 138 56.5
HPP92_021482 Vanilla planifolia HOM05D003870 ORTHO05D004567 1.1e-35 153.7 137 60.6
Pp3c15_19390 Physcomitrium patens HOM05D003870 ORTHO05D004567 7.2e-35 151.0 139 56.1
CBR_g31512 Chara braunii HOM05D003870 ORTHO05D004567 1.0e-33 147.1 147 57.1
Mapoly0009s0008 Marchantia polymorpha HOM05D003870 ORTHO05D004567 2.2e-28 129.4 145 51.7
Duzib192G0641 Durio zibethinus HOM05D003870 ORTHO05D004567 9.4e-27 124.0 100 67.0
C01p48190 Brassica napus HOM05D003870 ORTHO05D004567 4.7e-26 121.7 147 53.1
Peaxi162Scf00207g00951 Petunia axillaris HOM05D003870 ORTHO05D004567 6.1e-26 121.3 147 54.4
BolC1t04783H Brassica oleracea HOM05D003870 ORTHO05D004567 2.3e-25 119.4 147 53.1
MD17G1191200 Malus domestica HOM05D003870 ORTHO05D004567 8.8e-25 117.5 87 70.1
Dinv30483 Davidia involucrata HOM05D003870 ORTHO05D004567 2.6e-24 115.9 87 69.0
MD17G1191400 Malus domestica HOM05D003870 ORTHO05D004567 8.6e-20 100.9 60 85.0
HanXRQChr10g0313451 Helianthus annuus HOM05D003870 ORTHO05D004567 1.1e-19 100.5 87 59.8
ECA247G2331 Erigeron canadensis HOM05D003870 ORTHO05D004567 5.2e-17 91.7 81 55.6
MCO07G351 Micromonas commoda HOM05D003870 ORTHO05D004567 8.3e-15 84.3 128 40.6
Zm00001eb343540 Zea mays HOM05D003870 ORTHO05D004567 1.2e-13 80.5 119 47.1
Cre07.g330250 Chlamydomonas reinhardtii HOM05D003870 ORTHO05D004567 2.5e-11 72.8 122 40.2
MD10G1187500 Malus domestica HOM05D003870 ORTHO05D004567 2.5e-11 72.8 78 52.6
MD14G1193300 Malus domestica HOM05D003870 ORTHO05D004567 4.7e-10 68.6 78 52.6
unitig_747.g21485 Utricularia gibba HOM05D003870 ORTHO05D004567 2.2e-07 59.7 45 71.1
MD02G1178900 Malus domestica HOM05D003870 ORTHO05D004567 3.2e-06 55.8 33 69.7


User provided reference genes

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