Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 3.4e-115 418.3 204 100.0
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 5.1e-63 245.0 129 85.3
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 7.4e-62 241.1 130 83.8
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 1.3e-61 240.4 126 83.3
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 2.1e-61 239.6 129 82.9
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 3.6e-61 238.8 177 65.5
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 1.4e-60 236.9 127 81.1
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 4.0e-60 235.3 177 65.5
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 6.9e-60 234.6 173 65.3
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 9.0e-60 234.2 137 77.4
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 9.0e-60 234.2 129 81.4
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 1.2e-59 233.8 129 79.8
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 1.2e-59 233.8 128 82.8
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 7.6e-59 231.1 174 64.9
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 7.6e-59 231.1 125 82.4
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 7.6e-59 231.1 128 80.5
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 9.9e-59 230.7 124 81.5
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 1.3e-58 230.3 128 78.1
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 1.7e-58 229.9 128 82.0
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 2.2e-58 229.6 127 80.3
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 3.8e-58 228.8 133 77.4
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 3.8e-58 228.8 128 79.7
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 4.9e-58 228.4 125 80.8
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 4.9e-58 228.4 128 79.7
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 6.4e-58 228.0 125 81.6
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 1.1e-57 227.3 177 62.7
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 1.1e-57 227.3 129 79.8
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 1.1e-57 227.3 128 78.1
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 1.4e-57 226.9 128 78.9
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 1.4e-57 226.9 125 81.6
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 1.4e-57 226.9 128 78.1
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 1.4e-57 226.9 132 76.5
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 1.4e-57 226.9 124 82.3
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 1.9e-57 226.5 128 78.1
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 1.9e-57 226.5 128 78.1
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 1.9e-57 226.5 124 82.3
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 2.4e-57 226.1 128 79.7
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 3.2e-57 225.7 128 78.9
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 4.2e-57 225.3 128 78.1
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 4.2e-57 225.3 125 80.0
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 4.2e-57 225.3 125 80.0
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 4.2e-57 225.3 125 80.0
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 4.2e-57 225.3 125 80.0
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 5.5e-57 224.9 174 62.6
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 7.1e-57 224.6 125 80.0
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 7.1e-57 224.6 128 78.9
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 7.1e-57 224.6 128 78.9
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 9.3e-57 224.2 128 78.1
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 9.3e-57 224.2 136 73.5
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 9.3e-57 224.2 129 77.5
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 9.3e-57 224.2 136 75.0
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.2e-56 223.8 173 62.4
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 1.2e-56 223.8 129 79.1
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 1.6e-56 223.4 145 71.0
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 1.6e-56 223.4 124 79.0
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 2.1e-56 223.0 128 75.0
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 2.1e-56 223.0 128 78.1
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 2.1e-56 223.0 174 63.8
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 2.1e-56 223.0 145 71.7
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 2.7e-56 222.6 125 79.2
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 2.7e-56 222.6 128 78.9
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 2.7e-56 222.6 136 72.8
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 2.7e-56 222.6 125 77.6
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 3.5e-56 222.2 128 78.1
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.5e-56 222.2 128 77.3
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 3.5e-56 222.2 125 80.0
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 3.5e-56 222.2 128 78.1
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 3.5e-56 222.2 128 77.3
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 4.6e-56 221.9 125 79.2
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 4.6e-56 221.9 177 61.6
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 6.0e-56 221.5 125 75.2
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 7.9e-56 221.1 149 69.1
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 7.9e-56 221.1 142 73.9
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 7.9e-56 221.1 149 69.8
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 7.9e-56 221.1 129 76.7
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 7.9e-56 221.1 128 75.0
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 7.9e-56 221.1 136 72.8
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 7.9e-56 221.1 125 79.2
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 1.0e-55 220.7 126 77.0
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 1.0e-55 220.7 144 71.5
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 1.3e-55 220.3 128 78.1
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.3e-55 220.3 173 60.1
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 1.8e-55 219.9 136 72.8
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 1.8e-55 219.9 136 72.1
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 2.3e-55 219.5 136 72.8
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 2.3e-55 219.5 136 72.8
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 2.3e-55 219.5 136 72.8
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 3.0e-55 219.2 136 72.8
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 5.1e-55 218.4 136 73.5
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 5.1e-55 218.4 132 73.5
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 5.1e-55 218.4 128 75.0
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 6.7e-55 218.0 136 72.1
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 6.7e-55 218.0 140 71.4
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 6.7e-55 218.0 126 77.8
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 8.7e-55 217.6 136 72.8
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 8.7e-55 217.6 136 72.8
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 8.7e-55 217.6 125 76.8
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 8.7e-55 217.6 128 78.1
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 1.5e-54 216.9 149 68.5
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 1.5e-54 216.9 149 68.5
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 1.9e-54 216.5 136 72.1
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 2.5e-54 216.1 136 72.1
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 2.5e-54 216.1 136 72.1
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 2.5e-54 216.1 136 72.1
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 3.3e-54 215.7 125 76.0
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 4.3e-54 215.3 136 72.1
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 4.3e-54 215.3 125 77.6
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 5.6e-54 214.9 136 72.1
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 7.4e-54 214.5 115 79.1
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 7.4e-54 214.5 136 72.1
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 9.6e-54 214.2 136 72.1
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 9.6e-54 214.2 128 74.2
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 1.3e-53 213.8 125 74.4
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 1.6e-53 213.4 128 74.2
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 1.6e-53 213.4 151 68.2
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 2.1e-53 213.0 123 77.2
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 2.8e-53 212.6 125 74.4
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 2.8e-53 212.6 128 73.4
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 3.7e-53 212.2 128 72.7
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 4.8e-53 211.8 134 70.9
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 1.8e-52 209.9 142 69.0
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 3.2e-49 199.1 126 65.9
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 1.2e-48 197.2 123 68.3
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 6.9e-44 181.4 126 61.9
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 3.4e-43 179.1 126 66.7
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 2.9e-42 176.0 126 61.1
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 8.5e-42 174.5 124 61.3
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 1.9e-41 173.3 126 57.9
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 6.1e-40 168.3 126 57.9
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.4e-36 157.1 135 56.3
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 2.6e-35 152.9 127 53.5
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 4.2e-33 145.6 80 77.5
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 1.6e-32 143.7 79 83.5
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 3.6e-32 142.5 126 49.2
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 2.2e-29 133.3 130 45.4
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 2.2e-26 123.2 84 65.5
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 1.9e-25 120.2 129 41.1
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 2.5e-25 119.8 71 69.0
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 3.2e-25 119.4 129 41.1
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 2.6e-19 99.8 88 54.5
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 2.0e-14 83.6 39 87.2
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 3.2e-09 66.2 33 81.8


User provided reference genes

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