Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00462 Selenicereus undatus HOM05D005344 ORTHO05D006444 1.1e-74 283.1 138 100.0
Aqoxy6G02944 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 4.5e-31 138.3 130 53.1
CSS0034614 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 5.0e-30 134.8 113 58.4
Haze_22604 Corylus avellana HOM05D005344 ORTHO05D006444 1.1e-29 133.7 113 57.5
DCAR_013854 Daucus carota HOM05D005344 ORTHO05D006444 1.9e-29 132.9 130 50.8
Prupe.1G182400 Prunus persica HOM05D005344 ORTHO05D006444 1.9e-29 132.9 113 57.5
Rhsim07G0245900 Rhododendron simsii HOM05D005344 ORTHO05D006444 1.9e-29 132.9 113 56.6
Prupe.1G368800 Prunus persica HOM05D005344 ORTHO05D006444 2.5e-29 132.5 113 56.6
Potri.012G106900 Populus trichocarpa HOM05D005344 ORTHO05D006444 3.3e-29 132.1 130 50.0
AUR62035436 Chenopodium quinoa HOM05D005344 ORTHO05D006444 4.2e-29 131.7 119 53.8
AUR62035723 Chenopodium quinoa HOM05D005344 ORTHO05D006444 4.2e-29 131.7 119 53.8
Cc10_g01930 Coffea canephora HOM05D005344 ORTHO05D006444 5.5e-29 131.3 113 55.8
MELO3C003771.2 Cucumis melo HOM05D005344 ORTHO05D006444 5.5e-29 131.3 119 54.6
SalBow8G2912 Salvia bowleyana HOM05D005344 ORTHO05D006444 5.5e-29 131.3 127 50.4
Sed0018322 Sechium edule HOM05D005344 ORTHO05D006444 5.5e-29 131.3 119 52.9
EL10Ac1g02258 Beta vulgaris HOM05D005344 ORTHO05D006444 7.2e-29 131.0 119 52.9
Ciclev10002838m.g Citrus clementina HOM05D005344 ORTHO05D006444 7.2e-29 131.0 119 52.1
Duzib093G0333 Durio zibethinus HOM05D005344 ORTHO05D006444 7.2e-29 131.0 113 55.8
Gorai.009G225000 Gossypium raimondii HOM05D005344 ORTHO05D006444 7.2e-29 131.0 134 48.5
RcHm_v2.0_Chr6g0302491 Rosa chinensis HOM05D005344 ORTHO05D006444 7.2e-29 131.0 113 56.6
TAR625G0974 Trochodendron aralioides HOM05D005344 ORTHO05D006444 7.2e-29 131.0 113 56.6
Nn6g32300 Nelumbo nucifera HOM05D005344 ORTHO05D006444 9.5e-29 130.6 113 55.8
PSO541G4852 Papaver somniferum HOM05D005344 ORTHO05D006444 9.5e-29 130.6 113 55.8
PSO675G5369 Papaver somniferum HOM05D005344 ORTHO05D006444 9.5e-29 130.6 113 55.8
Nitab4.5_0001988g0010 Nicotiana tabacum HOM05D005344 ORTHO05D006444 1.2e-28 130.2 113 54.9
Thecc.08G040900 Theobroma cacao HOM05D005344 ORTHO05D006444 1.2e-28 130.2 113 55.8
CiPaw.08G064300 Carya illinoinensis HOM05D005344 ORTHO05D006444 1.6e-28 129.8 113 54.9
FAN15G2308 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.6e-28 129.8 113 56.6
Oeu024518.1 Olea europaea HOM05D005344 ORTHO05D006444 1.6e-28 129.8 113 54.0
Sabra01G0173600 Salix brachista HOM05D005344 ORTHO05D006444 1.6e-28 129.8 119 52.9
CSS0046670 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 2.1e-28 129.4 113 54.0
Cfa013923 Carpinus fangiana HOM05D005344 ORTHO05D006444 2.1e-28 129.4 112 56.2
Gohir.A05G214800 Gossypium hirsutum HOM05D005344 ORTHO05D006444 2.1e-28 129.4 113 54.0
CsaV3_3G045650 Cucumis sativus L. HOM05D005344 ORTHO05D006444 2.8e-28 129.0 113 54.9
FvH4_2g38800 Fragaria vesca HOM05D005344 ORTHO05D006444 2.8e-28 129.0 113 56.6
FAN20G2570 Fragaria x ananassa HOM05D005344 ORTHO05D006444 2.8e-28 129.0 113 56.6
Gohir.D05G218100 Gossypium hirsutum HOM05D005344 ORTHO05D006444 2.8e-28 129.0 113 54.0
MD02G1241500 Malus domestica HOM05D005344 ORTHO05D006444 2.8e-28 129.0 113 54.9
Sp7g02390 Schrenkiella parvula HOM05D005344 ORTHO05D006444 2.8e-28 129.0 113 54.0
AT5G39600 Arabidopsis thaliana HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 54.9
BcaB06g27347 Brassica carinata HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 54.0
A04p12340 Brassica napus HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 54.0
C04p46010 Brassica napus HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 54.0
BolC4t26183H Brassica oleracea HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 54.0
BraA04t16898Z Brassica rapa HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 54.0
CDE05G1331 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 3.6e-28 128.6 125 49.6
Dinv39499 Davidia involucrata HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 55.8
Nitab4.5_0006992g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 53.1
Potri.004G228566 Populus trichocarpa HOM05D005344 ORTHO05D006444 3.6e-28 128.6 119 52.1
SGA_v2.0_scaffold47G17494 Striga asiatica HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 54.9
unitig_899.g15276 Utricularia gibba HOM05D005344 ORTHO05D006444 3.6e-28 128.6 113 53.1
CAN.G1271.12 Capsicum annuum HOM05D005344 ORTHO05D006444 4.7e-28 128.3 113 53.1
CDE05G1229 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 4.7e-28 128.3 122 50.0
COL.COLO4_32025 Corchorus olitorius HOM05D005344 ORTHO05D006444 4.7e-28 128.3 125 52.0
Nitab4.5_0005425g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 4.7e-28 128.3 113 52.2
Oeu031192.1 Olea europaea HOM05D005344 ORTHO05D006444 4.7e-28 128.3 113 53.1
PGR083G0019 Punica granatum HOM05D005344 ORTHO05D006444 4.7e-28 128.3 119 52.9
AL7G50710 Arabidopsis lyrata HOM05D005344 ORTHO05D006444 6.1e-28 127.9 113 54.9
TAR625G1223 Trochodendron aralioides HOM05D005344 ORTHO05D006444 6.1e-28 127.9 118 53.4
ClCG05G018520 Citrullus lanatus HOM05D005344 ORTHO05D006444 8.0e-28 127.5 119 52.9
Migut.N03145 Erythranthe guttata HOM05D005344 ORTHO05D006444 8.0e-28 127.5 113 54.9
Thhalv10027992m.g Eutrema salsugineum HOM05D005344 ORTHO05D006444 8.0e-28 127.5 113 54.0
Peaxi162Scf00287g01714 Petunia axillaris HOM05D005344 ORTHO05D006444 8.0e-28 127.5 111 54.1
Sc02g0008440 Simmondsia chinensis HOM05D005344 ORTHO05D006444 8.0e-28 127.5 113 53.1
Solyc04g081220.3 Solanum lycopersicum HOM05D005344 ORTHO05D006444 8.0e-28 127.5 113 52.2
Sopen04g034830 Solanum pennellii HOM05D005344 ORTHO05D006444 8.0e-28 127.5 113 52.2
TAR381G0484 Trochodendron aralioides HOM05D005344 ORTHO05D006444 8.0e-28 127.5 113 54.0
vmacro04337 Vaccinium macrocarpon HOM05D005344 ORTHO05D006444 8.0e-28 127.5 120 51.7
Aa31LG9G16480 Aethionema arabicum HOM05D005344 ORTHO05D006444 1.0e-27 127.1 113 55.8
arahy.Tifrunner.gnm1.ann1.0YI8WX Arachis hypogaea HOM05D005344 ORTHO05D006444 1.0e-27 127.1 123 49.6
CARHR262690 Cardamine hirsuta HOM05D005344 ORTHO05D006444 1.0e-27 127.1 119 52.1
QL02p011006 Quercus lobata HOM05D005344 ORTHO05D006444 1.0e-27 127.1 113 54.0
Actinidia15404 Actinidia chinensis HOM05D005344 ORTHO05D006444 1.4e-27 126.7 113 52.2
Carub.0007s3634 Capsella rubella HOM05D005344 ORTHO05D006444 1.4e-27 126.7 113 53.1
PGR102G3231 Punica granatum HOM05D005344 ORTHO05D006444 1.4e-27 126.7 119 52.1
PGSC0003DMG400003723 Solanum tuberosum HOM05D005344 ORTHO05D006444 1.4e-27 126.7 113 52.2
MD07G1075400 Malus domestica HOM05D005344 ORTHO05D006444 1.8e-27 126.3 113 54.0
Atru.chr12.1135 Acer truncatum HOM05D005344 ORTHO05D006444 3.0e-27 125.6 113 52.2
QL03p018250 Quercus lobata HOM05D005344 ORTHO05D006444 3.0e-27 125.6 113 53.1
arahy.Tifrunner.gnm1.ann1.Y8FRL8 Arachis hypogaea HOM05D005344 ORTHO05D006444 4.0e-27 125.2 113 52.2
GSVIVG01009861001 Vitis vinifera HOM05D005344 ORTHO05D006444 4.0e-27 125.2 119 51.3
Aqoxy6G02319 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 6.8e-27 124.4 113 52.2
MSTRG.24255 Avicennia marina HOM05D005344 ORTHO05D006444 6.8e-27 124.4 113 54.9
Eucgr.F01631 Eucalyptus grandis HOM05D005344 ORTHO05D006444 8.9e-27 124.0 113 53.1
Phvul.009G015400 Phaseolus vulgaris HOM05D005344 ORTHO05D006444 8.9e-27 124.0 114 52.6
Cpa.g.sc116.53 Carica papaya HOM05D005344 ORTHO05D006444 1.2e-26 123.6 113 53.1
arahy.Tifrunner.gnm1.ann1.2J2T1L Arachis hypogaea HOM05D005344 ORTHO05D006444 1.5e-26 123.2 122 49.2
CANSAT56G2098 Cannabis sativa HOM05D005344 ORTHO05D006444 1.5e-26 123.2 113 53.1
HanXRQChr15g0480961 Helianthus annuus HOM05D005344 ORTHO05D006444 1.5e-26 123.2 113 52.2
Manes.18G015800 Manihot esculenta HOM05D005344 ORTHO05D006444 1.5e-26 123.2 113 53.1
CANSAT56G2754 Cannabis sativa HOM05D005344 ORTHO05D006444 2.0e-26 122.9 113 52.2
Glyma.06G025600 Glycine max HOM05D005344 ORTHO05D006444 2.0e-26 122.9 114 52.6
HanXRQChr04g0119171 Helianthus annuus HOM05D005344 ORTHO05D006444 2.0e-26 122.9 113 51.3
ECA236G2959 Erigeron canadensis HOM05D005344 ORTHO05D006444 2.6e-26 122.5 113 51.3
Lsat_1_v5_gn_7_29421 Lactuca sativa HOM05D005344 ORTHO05D006444 2.6e-26 122.5 113 52.2
TWI31G0971 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 2.6e-26 122.5 112 53.6
VMungo1309G2030 Vigna mungo HOM05D005344 ORTHO05D006444 2.6e-26 122.5 130 46.9
FAN26G0652 Fragaria x ananassa HOM05D005344 ORTHO05D006444 3.4e-26 122.1 123 51.2
arahy.Tifrunner.gnm1.ann1.NGB00B Arachis hypogaea HOM05D005344 ORTHO05D006444 4.4e-26 121.7 130 46.2
TWI75G1031 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 4.4e-26 121.7 111 53.2
FAN19G0275 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.3e-25 120.2 138 46.4
Glyma.04G025800 Glycine max HOM05D005344 ORTHO05D006444 1.7e-25 119.8 114 50.9
Lalb_Chr11g0061991 Lupinus albus HOM05D005344 ORTHO05D006444 1.7e-25 119.8 113 50.4
CSS0046173 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 3.7e-25 118.6 101 54.5
Psat5g014400 Pisum sativum HOM05D005344 ORTHO05D006444 3.7e-25 118.6 113 49.6
Medtr3g113260 Medicago truncatula HOM05D005344 ORTHO05D006444 6.3e-25 117.9 113 49.6
Medtr1g013440 Medicago truncatula HOM05D005344 ORTHO05D006444 1.1e-24 117.1 113 49.6
Ca_16814_v3 Cicer arietinum L. HOM05D005344 ORTHO05D006444 2.4e-24 115.9 113 48.7
FvH4_1g25620 Fragaria vesca HOM05D005344 ORTHO05D006444 2.4e-24 115.9 113 52.2
Lj1g0020845 Lotus japonicus HOM05D005344 ORTHO05D006444 2.4e-24 115.9 113 48.7
TPR.G38895 Trifolium pratense HOM05D005344 ORTHO05D006444 2.4e-24 115.9 113 49.6
HPP92_014936 Vanilla planifolia HOM05D005344 ORTHO05D006444 7.0e-24 114.4 112 50.9
Manes.09G054100 Manihot esculenta HOM05D005344 ORTHO05D006444 1.2e-23 113.6 118 48.3
Mapoly0151s0020 Marchantia polymorpha HOM05D005344 ORTHO05D006444 1.2e-23 113.6 115 47.8
FAN23G0736 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.6e-23 113.2 108 52.8
TPR.G5807 Trifolium pratense HOM05D005344 ORTHO05D006444 1.6e-23 113.2 114 48.2
SHI08085 Sapria himalayana HOM05D005344 ORTHO05D006444 7.8e-23 110.9 119 47.9
ATR0665G498 Amborella trichopoda HOM05D005344 ORTHO05D006444 2.9e-22 109.0 114 47.4
MBI05_g26505_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 5.0e-22 108.2 90 57.8
Pp3c9_11020 Physcomitrium patens HOM05D005344 ORTHO05D006444 6.6e-22 107.8 112 48.2
Atru.chr4.1572 Acer truncatum HOM05D005344 ORTHO05D006444 3.6e-20 102.1 113 45.1
MSTRG.22330 Avicennia marina HOM05D005344 ORTHO05D006444 3.1e-19 99.0 90 51.1
arahy.Tifrunner.gnm1.ann1.3U1GZ3 Arachis hypogaea HOM05D005344 ORTHO05D006444 5.2e-19 98.2 90 51.1
arahy.Tifrunner.gnm1.ann1.IGJ8TG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.2e-18 97.1 88 52.3
arahy.Tifrunner.gnm1.ann1.2QY3VR Arachis hypogaea HOM05D005344 ORTHO05D006444 1.5e-18 96.7 81 56.8
arahy.Tifrunner.gnm1.ann1.H9RICG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.5e-18 96.7 81 56.8
arahy.Tifrunner.gnm1.ann1.Y1NSFR Arachis hypogaea HOM05D005344 ORTHO05D006444 1.5e-18 96.7 81 56.8
arahy.Tifrunner.gnm1.ann1.ZTTZ43 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.2e-17 92.8 81 54.3
AagrBONN_evm.TU.Sc2ySwM_117.1156 Anthoceros agrestis HOM05D005344 ORTHO05D006444 3.7e-17 92.0 100 46.0
Os02g0282100 Oryza sativa ssp. japonica HOM05D005344 ORTHO05D006444 3.7e-17 92.0 126 42.9
MBI07_g11722_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 2.4e-16 89.4 69 59.4
Gorai.005G111500 Gossypium raimondii HOM05D005344 ORTHO05D006444 1.2e-15 87.0 108 39.8
Zm00001eb237200 Zea mays HOM05D005344 ORTHO05D006444 3.5e-15 85.5 124 41.1
ATR0605G109 Amborella trichopoda HOM05D005344 ORTHO05D006444 1.9e-13 79.7 92 44.6


User provided reference genes

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