Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00396 Selenicereus undatus HOM05D007661 ORTHO05D009671 4.0e-67 258.8 242 100.0
Sopen09g035780 Solanum pennellii HOM05D007661 ORTHO05D009671 1.5e-13 80.9 40 90.0
Solyc09g097840.2 Solanum lycopersicum HOM05D007661 ORTHO05D009671 2.6e-13 80.1 40 90.0
Sc09g0001750 Simmondsia chinensis HOM05D007661 ORTHO05D009671 4.4e-13 79.3 40 87.5
CAN.G742.39 Capsicum annuum HOM05D007661 ORTHO05D009671 1.7e-12 77.4 40 82.5
Peaxi162Scf00286g00824 Petunia axillaris HOM05D007661 ORTHO05D009671 1.7e-12 77.4 38 89.5
GSVIVG01026360001 Vitis vinifera HOM05D007661 ORTHO05D009671 2.2e-12 77.0 40 85.0
Actinidia14816 Actinidia chinensis HOM05D007661 ORTHO05D009671 3.7e-12 76.3 40 82.5
Lj4P789T29 Lonicera japonica HOM05D007661 ORTHO05D009671 4.9e-12 75.9 39 84.6
MSTRG.15290 Avicennia marina HOM05D007661 ORTHO05D009671 8.3e-12 75.1 38 86.8
Nitab4.5_0000309g0340 Nicotiana tabacum HOM05D007661 ORTHO05D009671 8.3e-12 75.1 37 89.2
PGSC0003DMG400017922 Solanum tuberosum HOM05D007661 ORTHO05D009671 8.3e-12 75.1 37 89.2
DCAR_020137 Daucus carota HOM05D007661 ORTHO05D009671 1.1e-11 74.7 40 82.5
Cc11_g03190 Coffea canephora HOM05D007661 ORTHO05D009671 2.4e-11 73.6 39 82.1
Ciclev10023479m.g Citrus clementina HOM05D007661 ORTHO05D009671 3.1e-11 73.2 40 80.0
CDE02G3106 Ceratophyllum demersum HOM05D007661 ORTHO05D009671 4.1e-11 72.8 40 77.5
Dinv10853 Davidia involucrata HOM05D007661 ORTHO05D009671 4.1e-11 72.8 38 84.2
Migut.M01214 Erythranthe guttata HOM05D007661 ORTHO05D009671 5.4e-11 72.4 40 77.5
Glyma.05G118000 Glycine max HOM05D007661 ORTHO05D009671 5.4e-11 72.4 40 75.0
Gohir.A07G094100 Gossypium hirsutum HOM05D022787 ORTHO05D021847 5.4e-11 72.4 176 81.8
Oeu027656.1 Olea europaea HOM05D007661 ORTHO05D009671 9.2e-11 71.6 36 86.1
Rhsim05G0075100 Rhododendron simsii HOM05D004968 ORTHO05D005922 9.2e-11 71.6 39 79.5
Lalb_Chr10g0097791 Lupinus albus HOM05D007661 ORTHO05D009671 1.2e-10 71.2 38 81.6
Nn1g08093 Nelumbo nucifera HOM05D007661 ORTHO05D009671 1.6e-10 70.9 38 81.6
Thhalv10013477m.g Eutrema salsugineum HOM05D007661 ORTHO05D009671 2.7e-10 70.1 39 84.6
AUR62007000 Chenopodium quinoa HOM05D007661 ORTHO05D009671 4.5e-10 69.3 40 80.0
ECA246G4719 Erigeron canadensis HOM05D007661 ORTHO05D009671 1.0e-09 68.2 40 72.5
Lsat_1_v5_gn_5_23180 Lactuca sativa HOM05D007661 ORTHO05D009671 1.0e-09 68.2 40 72.5
Phvul.002G208300 Phaseolus vulgaris HOM05D007661 ORTHO05D009671 1.0e-09 68.2 40 75.0
VMungo0251G1276 Vigna mungo HOM05D007661 ORTHO05D009671 1.0e-09 68.2 40 75.0
CiPaw.06G152900 Carya illinoinensis HOM05D007661 ORTHO05D009671 1.3e-09 67.8 37 78.4
PSO063G2745 Papaver somniferum HOM05D007661 ORTHO05D009671 1.3e-09 67.8 39 71.8
Aa31LG11G11280 Aethionema arabicum HOM05D007661 ORTHO05D009671 1.7e-09 67.4 39 79.5
AL6G29620 Arabidopsis lyrata HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
BcaB01g05190 Brassica carinata HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
BcaNung04935 Brassica carinata HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
C03p10300 Brassica napus HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
BolC3t13510H Brassica oleracea HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
BraA03t10206Z Brassica rapa HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
Carub.0006s1665 Capsella rubella HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
CARHR194640 Cardamine hirsuta HOM05D007661 ORTHO05D009671 1.7e-09 67.4 38 81.6
CSS0027415 Camellia sinensis var. sinensis HOM05D007661 ORTHO05D009671 2.3e-09 67.0 36 80.6
HanXRQChr05g0151261 Helianthus annuus HOM05D007661 ORTHO05D009671 2.3e-09 67.0 38 76.3
Prupe.6G355300 Prunus persica HOM05D007661 ORTHO05D009671 2.3e-09 67.0 35 80.0
PSO017G1759 Papaver somniferum HOM05D007661 ORTHO05D009671 2.9e-09 66.6 39 69.2
Haze_10692 Corylus avellana HOM05D007661 ORTHO05D009671 3.8e-09 66.2 55 54.5
MD04G1235400 Malus domestica HOM05D007661 ORTHO05D009671 3.8e-09 66.2 35 80.0
TAR362G0078 Trochodendron aralioides HOM05D007661 ORTHO05D009671 3.8e-09 66.2 36 80.6
A03p08810 Brassica napus HOM05D007661 ORTHO05D009671 5.0e-09 65.9 38 78.9
COL.COLO4_38175 Corchorus olitorius HOM05D007661 ORTHO05D009671 6.6e-09 65.5 35 80.0
AUR62000645 Chenopodium quinoa HOM05D007661 ORTHO05D009671 8.6e-09 65.1 38 78.9
CANSAT54G2964 Cannabis sativa HOM05D007661 ORTHO05D009671 1.5e-08 64.3 35 80.0
FvH4_4g11972 Fragaria vesca HOM05D007661 ORTHO05D009671 1.5e-08 64.3 35 77.1
FAN12G0412 Fragaria x ananassa HOM05D007661 ORTHO05D009671 1.5e-08 64.3 35 77.1
Sp6g25930 Schrenkiella parvula HOM05D007661 ORTHO05D009671 1.9e-08 63.9 36 80.6
Manes.09G145300 Manihot esculenta HOM05D007661 ORTHO05D009671 2.5e-08 63.5 35 77.1
QL11p020645 Quercus lobata HOM05D007661 ORTHO05D009671 2.5e-08 63.5 34 82.4
RcHm_v2.0_Chr7g0230951 Rosa chinensis HOM05D007661 ORTHO05D009671 4.3e-08 62.8 35 77.1
Medtr4g094245 Medicago truncatula HOM05D007661 ORTHO05D009671 5.6e-08 62.4 35 71.4
Atru.chr2.1141 Acer truncatum HOM05D007661 ORTHO05D009671 9.5e-08 61.6 34 76.5
Aqoxy3G03067 Aquilegia oxysepala HOM05D007661 ORTHO05D009671 9.5e-08 61.6 34 76.5
AT5G18390 Arabidopsis thaliana HOM05D007661 ORTHO05D009671 1.2e-07 61.2 35 80.0
Potri.019G025700 Populus trichocarpa HOM05D007661 ORTHO05D009671 1.6e-07 60.8 31 83.9
Sabra19G0035000 Salix brachista HOM05D003623 ORTHO05D004335 1.6e-07 60.8 31 83.9
THA.LOC104820748 Tarenaya hassleriana HOM05D007661 ORTHO05D009671 1.6e-07 60.8 37 73.0
Gohir.A09G142300 Gossypium hirsutum HOM05D007661 ORTHO05D009671 4.7e-07 59.3 29 86.2
PGR004G2374 Punica granatum HOM05D007661 ORTHO05D009671 4.7e-07 59.3 34 70.6
TPR.G10461 Trifolium pratense HOM05D007661 ORTHO05D009671 2.3e-06 57.0 34 67.6
TWI60G0191 Tripterygium wilfordii HOM05D007661 ORTHO05D009671 2.3e-06 57.0 31 77.4
Gohir.A11G054800 Gossypium hirsutum HOM05D007661 ORTHO05D009671 4.0e-06 56.2 28 85.7
Gohir.D13G171200 Gossypium hirsutum HOM05D007661 ORTHO05D009671 4.0e-06 56.2 28 85.7
Gohir.D13G171600 Gossypium hirsutum HOM05D007661 ORTHO05D009671 4.0e-06 56.2 28 85.7
Gorai.013G189200 Gossypium raimondii HOM05D007661 ORTHO05D009671 4.0e-06 56.2 28 85.7
Gorai.013G189900 Gossypium raimondii HOM05D007661 ORTHO05D009671 4.0e-06 56.2 28 85.7
Ah.02g111950 Amaranthus hybridus HOM05D007661 ORTHO05D009671 8.9e-06 55.1 28 85.7
Ah.07g201000 Amaranthus hybridus HOM05D007661 ORTHO05D009671 8.9e-06 55.1 28 85.7
ClCG06G009060 Citrullus lanatus HOM05D007661 ORTHO05D009671 8.9e-06 55.1 28 82.1
CsaV3_1G045690 Cucumis sativus L. HOM05D007661 ORTHO05D009671 8.9e-06 55.1 28 82.1


User provided reference genes

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