Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 1.2e-90 336.7 197 100.0
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 7.1e-54 214.5 194 64.4
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 1.8e-52 209.9 196 65.3
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 4.3e-51 205.3 197 64.0
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 5.8e-48 194.9 249 52.6
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 2.1e-45 186.4 197 58.9
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.1e-43 180.6 201 57.7
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 2.5e-43 179.5 197 56.9
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 7.4e-43 177.9 205 55.6
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 1.1e-41 174.1 204 55.4
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 1.8e-41 173.3 197 56.3
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 2.4e-41 172.9 143 66.4
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 4.0e-41 172.2 195 55.4
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 4.0e-41 172.2 195 55.4
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 4.0e-41 172.2 197 53.8
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 1.5e-40 170.2 197 53.3
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 1.5e-40 170.2 197 53.8
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 1.5e-40 170.2 198 55.1
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 2.0e-40 169.9 204 52.5
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 4.5e-40 168.7 197 53.8
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 5.8e-40 168.3 197 52.3
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 5.8e-40 168.3 198 55.6
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 5.8e-40 168.3 206 53.4
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 1.3e-39 167.2 198 52.5
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 3.8e-39 165.6 197 53.8
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 3.8e-39 165.6 198 54.0
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 5.0e-39 165.2 197 51.8
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 5.0e-39 165.2 197 53.3
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 5.0e-39 165.2 205 51.2
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 5.0e-39 165.2 197 52.8
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 6.5e-39 164.9 197 53.3
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 8.4e-39 164.5 195 51.8
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 8.4e-39 164.5 197 52.8
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 1.9e-38 163.3 195 52.3
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 1.9e-38 163.3 189 52.4
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.9e-38 163.3 202 54.5
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 1.9e-38 163.3 197 56.3
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 2.5e-38 162.9 198 53.0
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 2.5e-38 162.9 197 52.8
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 5.5e-38 161.8 203 50.2
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 7.1e-38 161.4 201 51.2
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 9.3e-38 161.0 201 52.7
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 1.2e-37 160.6 197 52.8
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.2e-37 160.6 202 54.0
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 1.6e-37 160.2 196 51.0
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 2.1e-37 159.8 198 51.5
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 2.1e-37 159.8 123 72.4
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 3.5e-37 159.1 194 50.5
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 3.5e-37 159.1 200 52.0
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 4.6e-37 158.7 213 50.7
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 6.1e-37 158.3 197 53.3
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 6.1e-37 158.3 197 53.3
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 6.1e-37 158.3 201 53.2
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 7.9e-37 157.9 196 50.5
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 7.9e-37 157.9 196 51.5
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 7.9e-37 157.9 202 49.0
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 1.0e-36 157.5 202 51.5
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 1.0e-36 157.5 204 50.5
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.3e-36 157.1 202 53.0
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 1.3e-36 157.1 124 67.7
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 1.3e-36 157.1 199 51.8
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 2.3e-36 156.4 202 50.5
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 3.0e-36 156.0 124 68.5
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 3.0e-36 156.0 201 48.8
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 5.1e-36 155.2 124 72.6
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 6.7e-36 154.8 192 52.1
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 8.7e-36 154.5 194 54.1
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 1.5e-35 153.7 191 50.3
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 2.5e-35 152.9 199 51.8
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 3.3e-35 152.5 192 50.5
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 5.7e-35 151.8 186 53.8
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 1.6e-34 150.2 196 52.0
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 2.2e-34 149.8 124 66.9
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 6.9e-33 144.8 193 49.2
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 1.2e-32 144.1 196 46.9
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 1.2e-32 144.1 193 48.2
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 1.2e-32 144.1 124 62.9
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 3.4e-32 142.5 200 46.0
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 3.4e-32 142.5 247 42.1
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 3.4e-32 142.5 196 46.4
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 1.0e-31 141.0 197 47.7
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 1.3e-31 140.6 197 48.7
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 2.2e-31 139.8 197 47.7
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 2.2e-31 139.8 197 48.7
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 2.9e-31 139.4 197 45.7
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 5.0e-31 138.7 196 46.4
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 8.5e-31 137.9 196 45.9
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 1.1e-30 137.5 202 46.0
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 1.9e-30 136.7 194 46.9
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 2.5e-30 136.3 203 45.3
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 3.2e-30 136.0 200 44.5
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 5.5e-30 135.2 198 48.5
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 7.2e-30 134.8 194 46.4
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 7.2e-30 134.8 194 46.4
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 1.0e-28 131.0 197 43.7
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.4e-28 130.6 197 46.2
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.4e-28 130.6 197 46.2
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 3.9e-28 129.0 197 45.7
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 3.3e-27 125.9 194 43.3
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 4.3e-27 125.6 196 44.4
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 6.3e-26 121.7 197 42.6
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 1.1e-25 120.9 198 43.4
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 1.4e-25 120.6 190 41.1
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 2.4e-25 119.8 141 53.2
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 1.5e-24 117.1 197 43.7
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 3.4e-24 115.9 129 54.3
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 4.5e-24 115.5 89 69.7
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 5.9e-24 115.2 212 42.9
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 1.3e-23 114.0 130 56.2
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 1.4e-22 110.5 147 47.6
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 1.9e-22 110.2 204 41.2
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 4.2e-22 109.0 95 63.2
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 7.2e-22 108.2 146 47.3
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 9.4e-22 107.8 124 56.5
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 9.4e-22 107.8 144 45.8
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 1.1e-19 100.9 168 42.9
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 4.4e-19 99.0 136 47.1
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 7.4e-19 98.2 136 47.8
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 1.3e-18 97.4 93 59.1
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 1.3e-18 97.4 197 39.6
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 2.8e-18 96.3 201 42.8
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.1e-17 92.4 174 38.5
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 1.1e-14 84.3 96 54.2
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 9.4e-14 81.3 126 41.3
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 2.3e-12 76.6 59 61.0
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 1.1e-11 74.3 131 42.7
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 7.0e-09 65.1 141 37.6
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 9.1e-09 64.7 119 35.3
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 2.0e-08 63.5 77 46.8
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 2.0e-08 63.5 81 50.6
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.3e-07 60.8 58 67.2
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 1.3e-07 60.8 77 44.2
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 1.7e-07 60.5 80 47.5
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 1.7e-07 60.5 80 47.5


User provided reference genes

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