Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00190 Selenicereus undatus HOM05D001997 ORTHO05D004620 6.2e-64 247.3 123 100.0
Atru.chr3.1570 Acer truncatum HOM05D001997 ORTHO05D004620 2.7e-11 72.4 114 43.0
Atru.chr3.1589 Acer truncatum HOM05D001997 ORTHO05D004620 2.7e-11 72.4 114 43.0
Ciclev10019328m.g Citrus clementina HOM05D001997 ORTHO05D004620 3.6e-11 72.0 116 41.4
Potri.017G035700 Populus trichocarpa HOM05D001997 ORTHO05D004620 5.1e-10 68.2 121 40.5
Sabra17G0022600 Salix brachista HOM05D001997 ORTHO05D004620 8.8e-10 67.4 113 43.4
FAN10G4317 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.5e-09 66.6 121 38.8
FAN01G1889 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.3e-09 65.5 121 38.0
FAN10G2611 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.3e-09 65.5 121 38.8
FAN10G3464 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.3e-09 65.5 121 38.8
Manes.04G048600 Manihot esculenta HOM05D001997 ORTHO05D004620 3.3e-09 65.5 121 36.4
FAN06G3325 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.4e-09 65.1 121 38.0
QL10p047463 Quercus lobata HOM05D001997 ORTHO05D004620 4.4e-09 65.1 112 40.2
FvH4_7g14000 Fragaria vesca HOM05D001997 ORTHO05D004620 5.7e-09 64.7 121 38.0
FAN06G4213 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.7e-09 64.7 121 38.0
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 7.4e-09 64.3 115 40.9
Prupe.2G167200 Prunus persica HOM05D001997 ORTHO05D004620 7.4e-09 64.3 108 41.7
Hund00167 Selenicereus undatus HOM05D001997 ORTHO05D004620 9.7e-09 63.9 36 86.1
THA.LOC104802304 Tarenaya hassleriana HOM05D001997 ORTHO05D004620 9.7e-09 63.9 117 36.8
Hma1.2p1_0597F.1_g186510 Hydrangea macrophylla HOM05D001997 ORTHO05D004620 1.3e-08 63.5 123 36.6
RcHm_v2.0_Chr1g0373181 Rosa chinensis HOM05D001997 ORTHO05D004620 1.3e-08 63.5 110 39.1
Nitab4.5_0002368g0100 Nicotiana tabacum HOM05D001997 ORTHO05D004620 2.8e-08 62.4 120 39.2
Potri.007G124700 Populus trichocarpa HOM05D001997 ORTHO05D004620 2.8e-08 62.4 123 38.2
RcHm_v2.0_Chr1g0354651 Rosa chinensis HOM05D001997 ORTHO05D004620 2.8e-08 62.4 121 37.2
SalBow3G4162 Salvia bowleyana HOM05D001997 ORTHO05D004620 4.8e-08 61.6 88 38.6
Rhsim09G0030400 Rhododendron simsii HOM05D001997 ORTHO05D004620 6.3e-08 61.2 123 35.0
TWI36G0125 Tripterygium wilfordii HOM05D001997 ORTHO05D004620 1.1e-07 60.5 119 37.8
Nitab4.5_0010690g0010 Nicotiana tabacum HOM05D001997 ORTHO05D004620 1.4e-07 60.1 117 35.9
FAN03G0465 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.8e-07 59.7 113 38.1
Lj6C60T7 Lonicera japonica HOM05D001997 ORTHO05D004620 1.8e-07 59.7 119 36.1
SGA_v2.0_scaffold16G07570 Striga asiatica HOM05D001997 ORTHO05D004620 2.4e-07 59.3 97 40.2
AL4G41910 Arabidopsis lyrata HOM05D001997 ORTHO05D004620 3.1e-07 58.9 109 39.4
Dinv22695 Davidia involucrata HOM05D001997 ORTHO05D004620 3.1e-07 58.9 124 33.9
ECA233G5997 Erigeron canadensis HOM05D001997 ORTHO05D004620 3.1e-07 58.9 101 40.6
FAN06G2538 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.1e-07 58.9 113 38.1
Cfa015772 Carpinus fangiana HOM05D001997 ORTHO05D004620 4.1e-07 58.5 115 40.0
Peaxi162Scf00375g00082 Petunia axillaris HOM05D001997 ORTHO05D004620 4.1e-07 58.5 117 36.8
AT2G43250 Arabidopsis thaliana HOM05D001997 ORTHO05D004620 5.3e-07 58.2 109 37.6
PGR044G1365 Punica granatum HOM05D001997 ORTHO05D004620 5.3e-07 58.2 121 33.9
FvH4_7g26521 Fragaria vesca HOM05D001997 ORTHO05D004620 7.0e-07 57.8 116 37.9
Cc01_g08750 Coffea canephora HOM05D001997 ORTHO05D004620 9.1e-07 57.4 83 42.2
FAN01G2316 Fragaria x ananassa HOM05D001997 ORTHO05D004620 9.1e-07 57.4 113 37.2
Medtr4g076640 Medicago truncatula HOM05D001997 ORTHO05D004620 9.1e-07 57.4 86 40.7
TAR622G0498 Trochodendron aralioides HOM05D001997 ORTHO05D004620 9.1e-07 57.4 116 37.1
MD07G1139400 Malus domestica HOM05D001997 ORTHO05D004620 1.2e-06 57.0 115 35.7
Sopen06g029850 Solanum pennellii HOM05D001997 ORTHO05D004620 1.2e-06 57.0 111 36.0
PGSC0003DMG400026903 Solanum tuberosum HOM05D001997 ORTHO05D004620 1.2e-06 57.0 111 35.1
Actinidia35961 Actinidia chinensis HOM05D001997 ORTHO05D004620 2.0e-06 56.2 117 32.5
Cpa.g.sc81.168 Carica papaya HOM05D001997 ORTHO05D004620 2.0e-06 56.2 110 40.9
Lsat_1_v5_gn_6_55020 Lactuca sativa HOM05D001997 ORTHO05D004620 2.0e-06 56.2 114 35.1
Carub.0004s2573 Capsella rubella HOM05D001997 ORTHO05D004620 3.4e-06 55.5 110 36.4
Ca_26058_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 3.4e-06 55.5 119 34.5
TAR636G0474 Trochodendron aralioides HOM05D001997 ORTHO05D004620 3.4e-06 55.5 112 36.6
AUR62035000 Chenopodium quinoa HOM05D001997 ORTHO05D004620 4.5e-06 55.1 107 33.6
Migut.N02417 Erythranthe guttata HOM05D001997 ORTHO05D004620 4.5e-06 55.1 83 37.3
FAN10G3679 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.5e-06 55.1 113 36.3
Glyma.11G094600 Glycine max HOM05D001997 ORTHO05D004620 4.5e-06 55.1 115 33.9
SGA_v2.0_scaffold4G02500 Striga asiatica HOM05D001997 ORTHO05D004620 5.9e-06 54.7 87 40.2
CARHR138340 Cardamine hirsuta HOM05D001997 ORTHO05D004620 7.7e-06 54.3 117 34.2
MBI11_g35030_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D004620 7.7e-06 54.3 83 41.0


User provided reference genes

Program Settings