Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 0.0e+00 1163.7 639 100.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 6.1e-256 887.5 641 71.9
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.1e-248 862.4 639 75.0
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.8e-248 862.1 639 75.4
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 4.0e-239 831.6 635 69.0
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 5.8e-222 774.6 638 67.2
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 5.6e-201 704.9 647 60.0
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 7.4e-201 704.5 661 58.1
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.3e-200 703.7 501 68.9
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.8e-199 699.9 644 57.3
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.2e-198 697.2 652 59.0
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 2.0e-198 696.4 642 60.9
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 3.8e-197 692.2 639 60.4
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 9.3e-196 687.6 643 57.1
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 6.0e-195 684.9 631 59.4
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 3.0e-194 682.6 632 60.4
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.1e-194 681.8 628 59.1
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 5.1e-194 681.8 647 59.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 1.5e-193 680.2 485 67.6
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.3e-192 677.2 644 58.5
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.1e-192 676.4 645 56.9
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 4.8e-192 675.2 624 59.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 6.2e-192 674.9 626 59.7
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.1e-191 674.1 474 67.5
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 3.1e-191 672.5 503 64.2
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.3e-191 671.8 476 65.8
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 6.9e-191 671.4 648 56.9
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.5e-190 670.2 647 57.7
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 4.5e-190 668.7 623 58.1
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.0e-189 667.5 632 54.7
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.3e-189 667.2 648 56.8
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 1.1e-188 664.1 647 56.4
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 3.2e-188 662.5 477 65.4
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 9.3e-188 661.0 656 55.6
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.7e-187 659.4 628 58.6
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 2.7e-187 659.4 641 56.6
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 3.5e-187 659.1 644 55.9
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 1.3e-186 657.1 642 54.2
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.5e-185 653.7 475 66.7
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.5e-185 653.7 635 57.8
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 4.8e-184 648.7 643 56.5
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 1.1e-183 647.5 624 55.9
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 6.9e-183 644.8 480 64.6
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.9e-183 644.8 480 64.6
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-182 644.0 635 55.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 2.0e-182 643.3 477 64.8
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 3.4e-182 642.5 498 62.4
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 4.5e-182 642.1 488 66.2
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.6e-182 641.3 493 63.7
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.6e-182 641.3 493 63.7
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.3e-181 640.6 645 56.7
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.7e-181 640.2 656 52.9
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 5.0e-181 638.6 498 64.7
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 5.0e-181 638.6 448 67.9
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 6.5e-181 638.3 641 55.5
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 8.5e-181 637.9 482 63.9
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.9e-180 636.7 510 62.0
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.9e-180 636.7 516 61.6
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 4.2e-180 635.6 643 56.0
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 4.2e-180 635.6 641 56.5
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 1.2e-179 634.0 468 63.7
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.2e-179 634.0 426 70.7
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 2.7e-179 632.9 486 63.0
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 3.6e-179 632.5 642 55.0
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 3.6e-179 632.5 645 54.9
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 3.6e-179 632.5 665 54.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.6e-179 632.1 476 64.3
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 3.0e-178 629.4 638 56.3
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 5.1e-178 628.6 466 64.4
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 6.7e-178 628.2 644 55.1
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 6.3e-176 621.7 644 53.7
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.1e-175 620.9 656 52.7
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 4.1e-175 619.0 467 63.6
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 2.0e-174 616.7 488 61.9
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 5.9e-174 615.1 637 52.4
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.5e-173 611.7 646 55.3
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.5e-173 611.7 646 55.3
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 2.5e-172 609.8 493 61.9
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 4.2e-172 609.0 487 62.4
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 9.4e-172 607.8 491 60.5
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.6e-171 607.1 640 54.4
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.7e-171 606.3 471 63.5
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.8e-170 603.6 639 54.9
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 3.9e-170 602.4 637 53.7
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.1e-169 600.9 639 53.2
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 9.7e-169 597.8 659 52.2
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.3e-168 597.4 648 51.2
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.5e-166 590.5 644 52.2
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.0e-165 587.8 460 62.4
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.3e-165 587.4 481 61.3
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 4.7e-163 578.9 494 58.9
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 3.0e-162 576.2 476 58.8
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 2.6e-161 573.2 474 57.8
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 5.7e-161 572.0 495 57.6
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.9e-157 559.7 635 49.1
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 8.5e-157 558.1 546 53.3
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 2.6e-153 546.6 633 49.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 2.7e-147 526.6 386 64.8
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 7.2e-140 501.9 503 53.3
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.5e-132 477.6 337 67.4
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 8.6e-125 451.8 482 47.5
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 7.3e-124 448.7 421 52.7
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.8e-122 444.1 456 50.2
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.2e-121 441.4 355 59.7
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.3e-120 438.0 463 49.2
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 2.9e-112 410.2 487 45.2
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.2e-110 404.8 599 42.4
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 4.6e-86 323.2 673 31.5
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 5.6e-84 316.2 529 35.5
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.7e-64 251.5 476 33.0
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 7.4e-52 209.5 490 30.0
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 5.0e-48 196.8 410 32.2
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 6.8e-29 133.3 98 63.3
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 6.8e-29 133.3 98 63.3
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 4.8e-27 127.1 98 61.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 2.1e-22 111.7 454 23.6


User provided reference genes

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