Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00150 Selenicereus undatus HOM05D000480 ORTHO05D000313 5.4e-167 591.3 383 100.0
Dinv29340 Davidia involucrata HOM05D003250 ORTHO05D003678 1.0e-19 102.1 366 30.1
Dinv36219 Davidia involucrata HOM05D000480 ORTHO05D000313 2.5e-18 97.4 364 27.7
Ah.01g018240 Amaranthus hybridus HOM05D000480 ORTHO05D000313 1.6e-17 94.7 133 39.1
GSVIVG01037385001 Vitis vinifera HOM05D000480 ORTHO05D000313 9.7e-15 85.5 290 26.9
CAN.G756.43 Capsicum annuum HOM05D000480 ORTHO05D000313 3.7e-14 83.6 377 24.1
Eucgr.J00665 Eucalyptus grandis HOM05D000448 ORTHO05D000313 4.1e-13 80.1 140 35.7
QL01p016002 Quercus lobata HOM05D000480 ORTHO05D000313 4.5e-12 76.6 156 34.0
TWI23G1193 Tripterygium wilfordii HOM05D000480 ORTHO05D000313 2.1e-09 67.8 408 28.2
Eucgr.D01210 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.7e-09 67.4 97 37.1
PGSC0003DMG400031159 Solanum tuberosum HOM05D000480 ORTHO05D000313 2.7e-09 67.4 391 27.6
Thecc.01G400000 Theobroma cacao HOM05D000480 ORTHO05D000313 4.7e-09 66.6 376 23.1
Carub.0004s2729 Capsella rubella HOM05D000480 ORTHO05D000313 1.0e-08 65.5 101 54.5
PSO063G0367 Papaver somniferum HOM05D000480 ORTHO05D000313 2.3e-08 64.3 103 52.4
TAR044G0002 Trochodendron aralioides HOM05D000480 ORTHO05D000313 3.0e-08 63.9 101 49.5
Thhalv10001799m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 5.2e-08 63.2 395 28.1
COL.COLO4_10975 Corchorus olitorius HOM05D000480 ORTHO05D000313 6.7e-08 62.8 101 33.7
Migut.L01539 Erythranthe guttata HOM05D000448 ORTHO05D000291 8.8e-08 62.4 347 25.9
PSO063G6971 Papaver somniferum HOM05D000480 ORTHO05D000313 1.1e-07 62.0 317 23.3
CANSAT25G3728 Cannabis sativa HOM05D000480 ORTHO05D000313 1.5e-07 61.6 103 32.0
Carub.0004s2730 Capsella rubella HOM05D000480 ORTHO05D000313 1.5e-07 61.6 424 23.1
THA.LOC104811543 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 1.5e-07 61.6 367 26.2
MD04G1235200 Malus domestica HOM05D000480 ORTHO05D000313 2.0e-07 61.2 100 36.0
arahy.Tifrunner.gnm1.ann1.80FDQG Arachis hypogaea HOM05D000480 ORTHO05D000313 2.6e-07 60.8 101 31.7
Thecc.01G399900 Theobroma cacao HOM05D000480 ORTHO05D000313 2.6e-07 60.8 106 34.9
Dinv44040 Davidia involucrata HOM05D000480 ORTHO05D000313 3.3e-07 60.5 97 44.3
BcaB02g08852 Brassica carinata HOM05D000480 ORTHO05D000313 4.4e-07 60.1 101 51.5
Thecc.03G145400 Theobroma cacao HOM05D000480 ORTHO05D000313 4.4e-07 60.1 391 22.3
TAR023G0002 Trochodendron aralioides HOM05D000480 ORTHO05D000313 4.4e-07 60.1 398 22.1
TAR374G0158 Trochodendron aralioides HOM05D000480 ORTHO05D000313 7.4e-07 59.3 101 31.7
Oeu047502.1 Olea europaea HOM05D000448 ORTHO05D000291 1.3e-06 58.5 314 23.9
TAR058G0001 Trochodendron aralioides HOM05D000480 ORTHO05D000313 1.3e-06 58.5 101 32.7
Dinv15411 Davidia involucrata HOM05D000480 ORTHO05D000313 2.2e-06 57.8 44 63.6
Hma1.2p1_0502F.1_g167920 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 2.8e-06 57.4 99 29.3
arahy.Tifrunner.gnm1.ann1.GU1UEY Arachis hypogaea HOM05D000480 ORTHO05D000313 8.2e-06 55.8 100 31.0
Ciclev10031687m.g Citrus clementina HOM05D000480 ORTHO05D000313 8.2e-06 55.8 319 20.7
TPR.G15146 Trifolium pratense HOM05D000480 ORTHO05D000313 8.2e-06 55.8 103 32.0


User provided reference genes

Program Settings