Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 3.1e-110 401.7 194 100.0
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 3.8e-68 261.9 207 63.8
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 3.0e-65 252.3 191 64.9
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 5.2e-65 251.5 210 61.4
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 6.8e-65 251.1 202 65.3
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 5.7e-64 248.1 220 60.0
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 9.8e-64 247.3 206 60.2
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 2.8e-63 245.7 206 63.6
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 3.1e-62 242.3 199 63.3
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 4.1e-62 241.9 209 64.6
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.0e-62 241.1 209 59.8
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 7.0e-62 241.1 209 59.3
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 2.7e-61 239.2 209 63.6
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 4.5e-61 238.4 209 63.6
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 5.9e-61 238.0 209 61.2
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 5.9e-61 238.0 206 64.1
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.9e-61 238.0 209 59.3
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 7.7e-61 237.7 203 63.5
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.0e-60 237.3 206 63.1
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 1.7e-60 236.5 202 59.4
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.8e-60 235.3 208 60.1
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 5.0e-60 235.0 194 62.4
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.5e-60 234.6 209 59.3
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 8.5e-60 234.2 194 63.9
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.1e-59 233.8 209 59.3
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.9e-59 233.0 179 64.8
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 3.2e-59 232.3 212 58.0
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.2e-58 230.3 200 59.5
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 1.2e-58 230.3 204 58.3
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 2.3e-57 226.1 200 59.5
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 2.0e-56 223.0 201 59.7
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 7.5e-56 221.1 196 57.7
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 9.8e-56 220.7 196 57.1
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 6.3e-55 218.0 207 57.5
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 2.4e-54 216.1 195 57.9
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 4.1e-54 215.3 207 57.0
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 9.2e-54 214.2 174 64.4
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 2.0e-53 213.0 195 56.9
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 5.9e-53 211.5 197 56.3
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 1.0e-52 210.7 195 58.5
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 1.1e-51 207.2 212 50.9
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 3.3e-51 205.7 192 55.2
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 4.3e-51 205.3 208 56.2
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 3.6e-50 202.2 211 52.1
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.7e-50 201.8 209 53.6
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.4e-49 200.3 209 53.1
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 6.8e-49 198.0 191 53.9
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 1.3e-47 193.7 158 59.5
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 1.6e-45 186.8 185 53.5
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 3.6e-42 175.6 190 50.5
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 2.3e-41 172.9 151 56.3
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 4.0e-41 172.2 190 52.1
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 3.7e-39 165.6 189 48.7
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 1.9e-38 163.3 182 48.4
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 9.2e-38 161.0 206 44.2
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.0e-36 157.5 115 67.8
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 1.3e-36 157.1 187 45.5
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 1.9e-35 153.3 233 40.3
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 5.8e-32 141.7 186 45.2
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 2.4e-30 136.3 160 46.9
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 4.1e-30 135.6 109 63.3
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 9.2e-30 134.4 169 48.5
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.6e-29 133.7 174 45.4
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.0e-28 131.0 177 44.1
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.3e-28 129.8 112 57.1
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 6.6e-28 128.3 99 67.7
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 8.9e-25 117.9 86 73.3
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 8.9e-25 117.9 160 41.9
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 9.9e-24 114.4 110 51.8
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 9.9e-24 114.4 127 50.4
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 4.9e-23 112.1 105 57.1
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 4.1e-22 109.0 161 44.7
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 9.2e-22 107.8 89 66.3
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.2e-21 107.5 90 64.4
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.2e-21 107.5 90 60.0
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 2.3e-20 103.2 91 63.7
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.1e-17 94.4 90 55.6
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.1e-14 84.3 57 66.7
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 1.0e-12 77.8 72 56.9


User provided reference genes

Program Settings