Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 2.2e-172 609.0 335 100.0
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 1.0e-89 334.3 355 61.1
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 1.0e-84 317.8 354 59.0
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 7.8e-77 291.6 354 54.2
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 5.2e-73 278.9 267 58.8
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 1.5e-67 260.8 382 46.9
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 9.5e-67 258.1 382 46.3
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 4.7e-66 255.8 341 48.4
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 4.7e-66 255.8 356 52.5
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 8.1e-66 255.0 395 45.8
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 2.4e-65 253.4 326 49.7
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 8.9e-65 251.5 396 45.5
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 8.9e-65 251.5 391 45.0
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 2.2e-63 246.9 384 46.1
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 2.2e-63 246.9 309 50.2
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 2.9e-63 246.5 369 49.9
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.1e-62 244.6 400 45.5
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 2.4e-62 243.4 386 46.4
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 3.2e-62 243.0 361 45.4
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 4.1e-62 242.7 407 44.5
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 1.2e-61 241.1 398 44.2
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 2.7e-61 240.0 397 43.6
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 3.5e-61 239.6 387 44.4
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 3.5e-61 239.6 360 44.2
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 4.6e-61 239.2 334 48.5
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 1.3e-60 237.7 268 52.6
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 1.7e-60 237.3 319 48.3
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 2.3e-60 236.9 401 45.6
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 5.1e-60 235.7 393 45.5
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 5.1e-60 235.7 275 52.7
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 8.7e-60 235.0 353 45.9
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 1.1e-59 234.6 281 51.2
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 2.5e-59 233.4 400 42.8
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 4.3e-59 232.6 400 45.8
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 9.6e-59 231.5 373 46.4
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.6e-58 230.7 373 44.2
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 2.8e-58 229.9 263 52.9
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 4.7e-58 229.2 340 47.1
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 6.2e-58 228.8 242 56.2
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 8.1e-58 228.4 271 53.9
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 1.1e-57 228.0 350 42.9
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 1.1e-57 228.0 299 51.5
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 1.4e-57 227.6 329 47.1
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 1.4e-57 227.6 382 43.5
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 1.8e-57 227.3 399 44.9
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 1.8e-57 227.3 382 43.5
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 1.8e-57 227.3 374 41.7
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 2.4e-57 226.9 265 54.0
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 2.4e-57 226.9 326 44.8
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 3.1e-57 226.5 344 43.0
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 5.2e-57 225.7 265 51.3
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.2e-56 224.6 322 46.6
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 1.2e-56 224.6 325 44.3
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 2.6e-56 223.4 235 54.5
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 5.8e-56 222.2 402 42.5
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 5.8e-56 222.2 232 53.0
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 1.3e-55 221.1 281 49.5
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 1.3e-55 221.1 325 44.0
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 2.9e-55 219.9 402 42.0
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 3.8e-55 219.5 262 53.8
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 6.4e-55 218.8 402 42.3
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 8.4e-55 218.4 352 42.9
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 3.2e-54 216.5 326 44.8
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 1.6e-53 214.2 308 45.8
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 1.6e-53 214.2 394 42.4
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 1.6e-53 214.2 345 40.9
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 2.1e-53 213.8 268 51.5
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 2.1e-53 213.8 323 42.7
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.7e-52 210.7 310 44.8
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 2.3e-52 210.3 374 40.9
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 3.9e-52 209.5 239 51.9
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 5.1e-52 209.1 436 39.7
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 1.1e-51 208.0 387 43.4
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 2.5e-51 206.8 342 43.9
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 4.3e-51 206.1 322 43.5
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 9.6e-51 204.9 343 44.0
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 1.3e-50 204.5 271 49.4
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 2.4e-49 200.3 265 46.8
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 2.4e-49 200.3 344 44.5
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 4.0e-49 199.5 303 43.2
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 4.0e-49 199.5 397 39.0
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 6.9e-49 198.7 332 42.5
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 1.5e-48 197.6 356 42.1
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 2.0e-48 197.2 350 41.7
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 4.5e-48 196.1 262 47.7
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 1.3e-47 194.5 320 45.0
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 8.4e-47 191.8 212 53.3
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 1.4e-46 191.0 274 44.2
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 1.4e-46 191.0 232 50.0
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 1.6e-45 187.6 268 49.3
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 2.1e-45 187.2 321 40.5
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 2.7e-45 186.8 336 43.5
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 4.6e-45 186.0 285 46.0
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 6.0e-45 185.7 239 53.1
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 6.0e-45 185.7 355 42.5
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 1.0e-44 184.9 357 43.4
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 1.3e-44 184.5 183 57.9
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 1.8e-44 184.1 353 44.5
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.9e-44 183.0 368 41.6
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.1e-44 182.6 368 41.3
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 1.1e-43 181.4 345 43.8
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 1.9e-43 180.6 345 43.8
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 2.5e-43 180.3 337 40.7
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 7.4e-43 178.7 320 44.1
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 9.6e-43 178.3 275 47.6
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 1.3e-42 177.9 269 48.0
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 6.2e-42 175.6 227 46.3
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 1.5e-40 171.0 368 38.6
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 2.6e-40 170.2 330 40.6
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 4.5e-40 169.5 294 42.2
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 5.8e-40 169.1 358 41.3
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 9.9e-40 168.3 336 40.8
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 2.9e-39 166.8 333 40.5
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 1.8e-36 157.5 357 37.0
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 5.1e-36 156.0 239 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 1.1e-35 154.8 234 42.7
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 5.6e-35 152.5 165 62.4
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 4.8e-34 149.4 280 38.9
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 3.1e-33 146.7 287 36.6
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 2.0e-32 144.1 249 40.6
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 4.5e-24 116.3 143 52.4
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.3e-23 114.8 350 36.9
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 1.9e-14 84.3 88 56.8
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 3.2e-14 83.6 218 31.7
Hund06385 Selenicereus undatus HOM05D004981 ORTHO05D005635 1.5e-11 74.7 78 57.7
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 7.4e-11 72.4 314 30.3
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 9.7e-11 72.0 192 35.9
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 1.7e-10 71.2 108 44.4
Lsat_1_v5_gn_5_14961 Lactuca sativa HOM05D004981 ORTHO05D005635 2.6e-08 63.9 182 35.7
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 3.4e-08 63.5 133 38.3
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.3e-07 61.6 83 47.0
VMungo1383G0650 Vigna mungo HOM05D004981 ORTHO05D005635 2.2e-07 60.8 139 37.4
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 3.8e-07 60.1 117 38.5


User provided reference genes

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