Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 3.7e-123 444.9 226 100.0
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 2.6e-100 369.0 213 85.0
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 4.9e-99 364.8 213 83.1
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 1.9e-98 362.8 213 83.1
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.9e-98 362.8 213 82.6
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 2.4e-98 362.5 213 84.0
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 4.1e-98 361.7 213 85.0
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 4.1e-98 361.7 213 83.1
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 4.1e-98 361.7 212 83.5
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 4.1e-98 361.7 213 83.1
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 4.1e-98 361.7 213 84.5
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 5.4e-98 361.3 213 85.0
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 5.4e-98 361.3 213 84.0
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 7.1e-98 360.9 213 83.6
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.1e-97 359.4 228 78.9
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.7e-97 359.0 213 83.6
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.5e-97 358.6 211 83.4
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 4.6e-97 358.2 213 83.1
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.0e-96 357.1 215 83.7
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.9e-96 355.1 213 81.2
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 5.1e-96 354.8 213 82.2
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 8.6e-96 354.0 213 81.7
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.5e-95 353.2 213 81.2
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.9e-95 352.8 213 79.8
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 3.3e-95 352.1 213 80.8
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 3.3e-95 352.1 213 82.2
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 4.3e-95 351.7 213 81.7
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 5.6e-95 351.3 213 80.8
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 7.3e-95 350.9 213 80.3
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 7.3e-95 350.9 213 80.3
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 9.5e-95 350.5 213 80.3
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 9.5e-95 350.5 213 80.3
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 1.6e-94 349.7 213 81.2
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 1.6e-94 349.7 214 79.4
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 1.6e-94 349.7 229 77.3
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 2.1e-94 349.4 223 77.6
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.8e-94 349.0 214 82.7
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.8e-94 349.0 213 79.8
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 3.6e-94 348.6 213 79.8
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 4.7e-94 348.2 213 81.2
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 4.7e-94 348.2 213 79.8
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.4e-93 346.7 213 79.8
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 1.8e-93 346.3 213 79.8
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 2.3e-93 345.9 213 80.8
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 3.1e-93 345.5 213 80.3
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 3.1e-93 345.5 213 76.1
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 4.0e-93 345.1 213 77.5
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 4.0e-93 345.1 213 79.8
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 6.8e-93 344.4 223 76.2
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 6.8e-93 344.4 212 79.2
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 6.8e-93 344.4 213 78.4
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 8.9e-93 344.0 213 80.3
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 1.2e-92 343.6 213 78.4
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 1.5e-92 343.2 213 79.3
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 2.0e-92 342.8 213 77.0
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 2.0e-92 342.8 250 70.4
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 4.4e-92 341.7 213 78.4
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 4.4e-92 341.7 213 77.5
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 5.8e-92 341.3 213 78.9
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 5.8e-92 341.3 213 78.9
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 5.8e-92 341.3 213 78.4
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 7.6e-92 340.9 207 80.7
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 1.3e-91 340.1 213 78.4
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 2.9e-91 339.0 213 78.4
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 2.9e-91 339.0 213 80.3
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 3.7e-91 338.6 213 77.9
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.7e-91 338.6 213 79.3
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 3.7e-91 338.6 213 77.5
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 4.9e-91 338.2 213 76.1
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 8.3e-91 337.4 213 77.0
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 1.1e-90 337.0 213 77.0
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 1.1e-90 337.0 213 76.5
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 1.4e-90 336.7 214 77.6
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 5.4e-90 334.7 211 76.3
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 7.1e-90 334.3 199 81.9
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 7.1e-90 334.3 213 74.6
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 6.0e-89 331.3 213 75.6
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 6.0e-89 331.3 213 75.6
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 6.0e-89 331.3 213 74.6
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.0e-88 330.5 213 76.1
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 1.0e-88 330.5 211 75.4
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 1.0e-88 330.5 213 75.1
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.3e-88 330.1 211 75.4
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.7e-88 329.7 211 75.4
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 1.7e-88 329.7 197 81.7
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 3.0e-88 328.9 212 76.9
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 3.9e-88 328.6 211 74.9
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 3.9e-88 328.6 213 74.2
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 5.1e-88 328.2 213 74.6
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 5.1e-88 328.2 213 74.2
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 8.6e-88 327.4 213 74.2
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 8.6e-88 327.4 283 63.6
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.9e-87 326.2 213 73.7
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 1.9e-87 326.2 213 74.2
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 1.9e-87 326.2 213 74.2
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 2.5e-87 325.9 211 74.4
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 3.3e-87 325.5 213 75.1
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 5.6e-87 324.7 213 73.7
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 7.3e-87 324.3 213 72.8
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 9.6e-87 323.9 199 79.9
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 9.6e-87 323.9 213 74.2
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.2e-86 323.6 213 77.5
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 1.6e-86 323.2 196 81.1
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 3.6e-86 322.0 213 71.8
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 8.1e-86 320.9 220 72.7
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 1.8e-85 319.7 211 72.5
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 4.0e-85 318.5 211 73.9
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 4.0e-85 318.5 211 73.9
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 8.9e-85 317.4 213 73.7
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 1.2e-84 317.0 224 70.1
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 1.2e-84 317.0 192 80.7
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 1.5e-84 316.6 225 69.8
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 4.4e-84 315.1 245 65.7
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 1.3e-83 313.5 213 74.2
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 4.9e-83 311.6 213 72.8
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 6.4e-83 311.2 204 73.5
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 5.4e-82 308.1 213 71.4
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 6.0e-81 304.7 184 83.7
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 1.3e-80 303.5 213 69.5
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.9e-80 302.0 206 72.8
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 6.6e-80 301.2 213 68.5
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 4.3e-79 298.5 231 66.2
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 7.3e-79 297.7 213 71.4
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 8.1e-78 294.3 213 70.0
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 8.1e-78 294.3 213 67.6
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.4e-77 292.7 196 78.6
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 5.3e-77 291.6 186 78.0
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 7.6e-76 287.7 213 70.0
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 8.4e-75 284.3 212 67.9
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 4.2e-74 282.0 212 65.6
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 1.0e-72 277.3 213 69.0
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.0e-72 277.3 282 55.7
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 5.1e-72 275.0 213 64.8
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.6e-72 274.6 202 70.3
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.5e-71 272.7 205 64.4
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.4e-69 266.9 221 60.6
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.2e-68 263.8 215 60.5
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 2.2e-67 259.6 221 58.4
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 7.1e-66 254.6 147 82.3
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 2.3e-64 249.6 213 65.3
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 8.7e-64 247.7 230 54.8
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 7.4e-63 244.6 212 58.5
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.3e-62 243.8 147 83.0
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.1e-61 239.2 207 64.3
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 1.7e-59 233.4 211 57.8
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 2.9e-59 232.6 213 54.9
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 1.9e-58 229.9 147 74.8
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 3.5e-57 225.7 157 68.2
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.0e-56 224.2 194 61.9
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 3.8e-51 205.7 116 85.3
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.8e-51 205.7 166 66.3
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 9.3e-50 201.1 208 50.5
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 5.1e-48 195.3 213 48.8
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 2.6e-44 183.0 122 75.4
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 3.6e-41 172.6 105 80.0
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.2e-38 163.3 91 84.6
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 6.3e-38 161.8 100 81.0
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.1e-37 159.5 148 60.1
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 1.7e-30 137.1 118 61.9
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 1.7e-30 137.1 118 61.9
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 5.3e-29 132.1 84 79.8
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 7.2e-26 121.7 80 72.5
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 1.2e-25 120.9 198 37.4
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 4.4e-23 112.5 82 68.3
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 5.9e-20 102.1 160 38.8
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.2e-17 94.4 85 57.6
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 1.0e-16 91.3 66 63.6
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.0e-16 91.3 68 66.2
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.7e-14 84.0 64 68.8
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 6.3e-14 82.0 99 45.5
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 6.3e-14 82.0 72 62.5
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 4.2e-10 69.3 123 41.5
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 4.0e-08 62.8 191 27.2
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.2e-08 62.4 37 67.6
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 1.7e-06 57.4 39 71.8


User provided reference genes

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