Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_3491F.1_g336370 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 6.2e-120 434.1 213 100.0
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 8.1e-104 380.6 213 85.4
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 1.1e-97 360.1 213 79.8
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.6e-96 356.3 213 79.3
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 3.4e-94 348.6 213 77.9
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 3.4e-94 348.6 213 77.9
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 1.9e-92 342.8 213 75.6
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 7.9e-91 337.4 213 76.5
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 1.6e-88 329.7 213 72.8
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 2.8e-88 328.9 213 75.1
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 1.1e-87 327.0 213 70.9
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 2.4e-87 325.9 213 72.8
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 4.0e-87 325.1 217 70.5
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 4.0e-87 325.1 213 71.4
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 5.3e-87 324.7 213 73.7
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 2.0e-86 322.8 212 73.1
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.6e-86 322.4 213 71.8
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 1.3e-85 320.1 213 70.9
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 1.3e-85 320.1 213 72.3
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.2e-85 319.3 213 70.0
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 2.9e-85 318.9 213 72.3
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 3.8e-85 318.5 213 70.0
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 4.9e-85 318.2 213 70.9
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.4e-84 316.6 212 71.2
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.4e-84 316.6 212 71.2
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.5e-84 315.8 213 69.0
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 2.5e-84 315.8 213 70.0
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 2.5e-84 315.8 213 70.9
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 4.2e-84 315.1 213 70.4
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 5.5e-84 314.7 213 68.5
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 5.5e-84 314.7 213 68.5
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 7.1e-84 314.3 213 70.9
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 9.3e-84 313.9 213 70.4
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.6e-83 313.2 213 69.5
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 2.1e-83 312.8 213 70.0
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 2.7e-83 312.4 213 72.3
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 2.7e-83 312.4 213 68.5
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.5e-83 312.0 213 70.0
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 3.5e-83 312.0 213 69.0
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 6.0e-83 311.2 213 70.0
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.0e-83 311.2 213 70.0
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.0e-83 311.2 213 70.0
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.9e-83 310.8 213 69.5
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.3e-82 310.1 213 70.4
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.8e-82 309.7 211 71.1
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 2.3e-82 309.3 213 71.8
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 3.0e-82 308.9 213 71.8
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 5.1e-82 308.1 213 68.5
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 6.7e-82 307.8 213 69.5
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 8.7e-82 307.4 213 68.1
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 8.7e-82 307.4 213 68.5
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 2.5e-81 305.8 213 70.4
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 2.5e-81 305.8 213 67.1
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 3.3e-81 305.4 213 66.7
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.3e-80 303.5 211 67.8
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 1.3e-80 303.5 213 66.7
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.3e-80 303.5 213 65.7
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 2.1e-80 302.8 213 69.0
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 4.8e-80 301.6 212 66.0
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 4.8e-80 301.6 213 65.3
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.4e-79 300.1 213 69.5
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 3.1e-79 298.9 213 64.3
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 4.1e-79 298.5 213 70.4
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 5.3e-79 298.1 213 64.3
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 5.3e-79 298.1 213 64.3
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 5.3e-79 298.1 213 64.3
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 5.3e-79 298.1 213 64.3
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 9.0e-79 297.4 213 68.5
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 1.2e-78 297.0 213 63.4
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 2.0e-78 296.2 213 63.8
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 3.4e-78 295.4 213 63.8
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 1.0e-77 293.9 213 66.2
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 1.3e-77 293.5 213 62.4
ClCG06G009470 Citrullus lanatus HOM05D000329 ORTHO05D005330 2.9e-77 292.4 200 69.0
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 2.9e-77 292.4 213 65.3
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 4.2e-76 288.5 213 62.9
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 5.7e-73 278.1 213 62.0
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 2.8e-72 275.8 213 61.5
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 3.7e-72 275.4 213 61.0
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 6.3e-72 274.6 213 61.5
Haze_04430 Corylus avellana HOM05D000329 ORTHO05D005330 1.4e-71 273.5 186 70.4
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 1.8e-71 273.1 213 60.6
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.5e-70 270.0 211 63.0
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 5.0e-69 265.0 223 57.4
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 5.7e-65 251.5 214 57.9
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 6.3e-64 248.1 213 59.6
QL93p0164_0019 Quercus lobata HOM05D000329 ORTHO05D005330 1.1e-63 247.3 164 71.3
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.2e-59 233.8 172 63.4
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 2.4e-55 219.5 213 50.7
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 9.1e-55 217.6 213 50.7
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-53 213.8 180 61.7
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-53 213.8 180 61.7
Nitab4.5_0003285g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.9e-53 212.6 147 67.3
Nitab4.5_0000432g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 5.0e-53 211.8 147 67.3
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 6.1e-51 204.9 219 47.9
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.4e-50 203.8 217 48.8
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 9.7e-49 197.6 221 46.2
Sed0005472 Sechium edule HOM05D000329 ORTHO05D005330 1.2e-46 190.7 152 61.2
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.5e-41 173.7 213 44.1
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 7.5e-41 171.4 213 45.5
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 2.9e-29 132.9 212 38.2
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 1.2e-27 127.5 90 57.8
SHI23197 Sapria himalayana HOM05D000329 ORTHO05D005330 3.4e-25 119.4 109 50.5
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 7.5e-25 118.2 61 85.2
Rhsim10G0071500 Rhododendron simsii HOM05D000329 ORTHO05D005330 1.9e-20 103.6 171 37.4
SHI23198 Sapria himalayana HOM05D005377 ORTHO05D003034 2.3e-18 96.7 61 62.3
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 3.4e-17 92.8 73 60.3
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.2e-16 90.1 186 31.2
Lsat_1_v5_gn_7_52080 Lactuca sativa HOM05D001785 ORTHO05D001150 3.5e-14 82.8 46 80.4
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.5e-14 82.8 43 83.7
Lsat_1_v5_gn_7_52100 Lactuca sativa HOM05D000329 ORTHO05D005330 3.7e-08 62.8 73 45.2
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 3.2e-07 59.7 227 22.0
Cfa012903 Carpinus fangiana HOM05D000329 ORTHO05D005330 4.6e-06 55.8 42 61.9


User provided reference genes

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