Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 2.3e-120 435.6 235 100.0
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 1.1e-90 337.0 236 73.3
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 1.9e-90 336.3 235 72.3
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 7.4e-90 334.3 235 72.8
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 2.8e-89 332.4 233 71.2
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 2.8e-89 332.4 233 71.2
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 8.1e-89 330.9 233 70.8
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 1.1e-88 330.5 237 73.4
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.4e-88 330.1 235 72.3
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 4.0e-88 328.6 235 69.8
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 9.0e-88 327.4 236 72.0
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 3.4e-87 325.5 237 69.6
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 5.8e-87 324.7 233 70.0
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 7.6e-87 324.3 233 71.7
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 1.0e-83 313.9 238 68.1
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 1.3e-83 313.5 238 68.1
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 1.8e-83 313.2 235 68.5
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 1.5e-82 310.1 232 67.2
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 5.6e-82 308.1 188 79.3
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 1.3e-81 307.0 236 69.1
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 2.1e-81 306.2 236 69.1
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 4.8e-81 305.1 236 68.6
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 8.1e-81 304.3 232 67.2
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 5.3e-80 301.6 235 65.1
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 2.6e-79 299.3 237 64.6
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 3.4e-79 298.9 235 67.7
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 2.2e-78 296.2 229 65.1
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 2.9e-78 295.8 226 70.4
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 2.9e-78 295.8 225 66.7
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 3.8e-78 295.4 182 74.7
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 6.5e-78 294.7 183 76.5
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 6.5e-78 294.7 233 64.8
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 1.4e-77 293.5 233 66.5
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 5.5e-77 291.6 225 65.3
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 1.6e-76 290.0 235 65.1
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 2.1e-76 289.7 238 65.5
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 2.1e-76 289.7 239 64.4
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.7e-76 289.3 233 63.1
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 4.6e-76 288.5 235 63.4
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 4.6e-76 288.5 184 74.5
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 4.6e-76 288.5 233 63.9
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 6.0e-76 288.1 182 74.2
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 1.0e-75 287.3 183 74.9
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 1.0e-75 287.3 183 74.9
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 1.0e-75 287.3 239 65.3
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.3e-75 287.0 180 73.9
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 1.3e-75 287.0 239 64.0
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.8e-75 286.6 233 62.2
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.8e-75 286.6 239 64.0
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 3.9e-75 285.4 181 71.8
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 6.7e-75 284.6 231 63.6
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.5e-74 283.5 187 73.8
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 1.5e-74 283.5 235 66.0
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 1.9e-74 283.1 180 72.2
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 1.9e-74 283.1 181 72.4
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 4.3e-74 282.0 238 61.8
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 5.7e-74 281.6 235 62.1
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.3e-73 280.4 180 71.1
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 1.3e-73 280.4 233 63.1
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.6e-73 280.0 187 71.7
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 2.8e-73 279.3 189 73.0
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 8.2e-73 277.7 236 61.4
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 8.2e-73 277.7 237 64.6
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 1.8e-72 276.6 232 62.5
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 1.8e-72 276.6 236 64.0
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 2.4e-72 276.2 233 63.5
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 4.1e-72 275.4 235 60.9
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 5.3e-72 275.0 189 72.0
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 1.2e-71 273.9 185 68.1
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 1.2e-71 273.9 185 68.1
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 2.0e-71 273.1 227 61.7
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 2.6e-71 272.7 240 61.7
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 3.4e-71 272.3 233 61.8
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 1.0e-70 270.8 180 70.6
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 1.7e-70 270.0 185 68.1
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 2.2e-70 269.6 237 61.6
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 2.2e-70 269.6 207 64.7
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 3.8e-70 268.9 185 68.1
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 3.8e-70 268.9 180 70.0
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 3.8e-70 268.9 185 68.1
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 3.8e-70 268.9 180 70.6
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 8.4e-70 267.7 180 69.4
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 8.4e-70 267.7 180 69.4
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 1.4e-69 266.9 180 69.4
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.4e-69 266.9 232 61.2
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 2.5e-69 266.2 182 70.3
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 5.5e-69 265.0 180 69.4
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 5.5e-69 265.0 180 70.0
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 7.2e-69 264.6 180 67.8
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 2.7e-68 262.7 231 59.7
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 3.0e-67 259.2 234 60.3
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 6.7e-67 258.1 188 68.1
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 6.7e-67 258.1 203 66.0
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 1.1e-66 257.3 188 69.1
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 3.3e-66 255.8 212 61.3
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 4.8e-65 251.9 186 65.1
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 2.6e-63 246.1 190 62.6
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 3.4e-63 245.7 235 54.9
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 5.0e-62 241.9 176 71.0
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 5.0e-62 241.9 181 65.7
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.1e-61 240.7 176 67.0
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 4.2e-61 238.8 182 63.7
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 7.2e-61 238.0 180 63.3
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 1.6e-60 236.9 226 57.5
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 1.1e-58 230.7 179 62.6
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 2.5e-58 229.6 180 62.2
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 1.2e-55 220.7 134 74.6
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 3.2e-53 212.6 145 69.0
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 2.5e-45 186.4 146 61.6
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 7.2e-45 184.9 147 59.9
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.2e-44 184.1 146 60.3
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 1.6e-44 183.7 235 48.1
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 2.1e-44 183.3 147 59.2
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.1e-44 183.3 147 59.9
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 2.1e-44 183.3 146 60.3
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 2.7e-44 183.0 147 59.2
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 2.7e-44 183.0 147 59.2
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 2.7e-44 183.0 147 59.2
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 3.6e-44 182.6 147 59.2
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 3.6e-44 182.6 147 59.2
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 6.1e-44 181.8 147 59.2
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 1.4e-43 180.6 144 59.7
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.5e-42 177.2 146 58.2
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 2.6e-42 176.4 191 48.2
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 3.3e-42 176.0 145 55.9
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 4.4e-42 175.6 146 56.2
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 8.2e-41 171.4 160 53.1
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.0e-35 154.5 102 73.5
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 1.0e-35 154.5 146 50.7
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 2.2e-33 146.7 105 65.7
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 4.1e-32 142.5 104 61.5
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 1.7e-30 137.1 160 44.4
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 4.2e-29 132.5 131 55.7
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.6e-28 130.6 233 40.3
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 4.7e-28 129.0 146 45.2
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 6.1e-28 128.6 132 52.3
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 4.0e-27 125.9 167 41.9
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 3.7e-25 119.4 93 64.5
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 3.7e-25 119.4 170 39.4
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 7.7e-23 111.7 135 47.4
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.3e-22 110.9 150 37.3
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 1.3e-22 110.9 155 37.4
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 2.9e-22 109.8 230 37.0
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 7.3e-21 105.1 105 60.0
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 2.8e-20 103.2 101 53.5
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 3.6e-20 102.8 203 32.5
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 5.7e-18 95.5 71 57.7
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 4.1e-16 89.4 67 65.7
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 7.0e-16 88.6 113 41.6
Hma1.2p1_1893F.1_g306730 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 7.3e-13 78.6 59 67.8
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 3.4e-10 69.7 48 70.8
AUR62003563 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.7e-09 66.2 117 36.8
AUR62017877 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.1e-08 64.7 84 40.5
SMO155G0005 Selaginella moellendorffii HOM05D004659 ORTHO05D378663 8.6e-06 55.1 42 64.3


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