Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0533F.1_g173520 Hydrangea macrophylla HOM05D005509 ORTHO05D006411 2.3e-38 161.8 82 100.0
Hma1.2p1_2608F.1_g325340 Hydrangea macrophylla HOM05D005509 ORTHO05D006411 2.3e-38 161.8 82 100.0
Ciclev10032822m.g Citrus clementina HOM05D005509 ORTHO05D006411 1.7e-33 145.6 82 87.8
TAR369G0916 Trochodendron aralioides HOM05D005509 ORTHO05D006411 1.7e-33 145.6 82 86.6
TAR369G1093 Trochodendron aralioides HOM05D005509 ORTHO05D006411 1.7e-33 145.6 82 86.6
Atru.chr12.494 Acer truncatum HOM05D005509 ORTHO05D006411 2.9e-33 144.8 82 87.8
Actinidia29219 Actinidia chinensis HOM05D005509 ORTHO05D006411 3.8e-33 144.4 82 85.4
Manes.10G032200 Manihot esculenta HOM05D005509 ORTHO05D006411 3.8e-33 144.4 82 85.4
Actinidia13870 Actinidia chinensis HOM05D005509 ORTHO05D006411 1.1e-32 142.9 82 85.4
Gohir.A10G216300 Gossypium hirsutum HOM05D005509 ORTHO05D006411 1.4e-32 142.5 82 86.6
Gohir.D10G225300 Gossypium hirsutum HOM05D005509 ORTHO05D006411 1.4e-32 142.5 82 86.6
Gorai.011G256300 Gossypium raimondii HOM05D005509 ORTHO05D006411 1.4e-32 142.5 82 86.6
Thecc.10G045900 Theobroma cacao HOM05D005509 ORTHO05D006411 1.4e-32 142.5 82 85.4
COL.COLO4_14983 Corchorus olitorius HOM05D005509 ORTHO05D006411 1.9e-32 142.1 82 86.6
Dinv25997 Davidia involucrata HOM05D005509 ORTHO05D006411 3.2e-32 141.4 82 86.6
Nitab4.5_0001831g0030 Nicotiana tabacum HOM05D005509 ORTHO05D006411 4.2e-32 141.0 82 82.9
Nitab4.5_0014743g0010 Nicotiana tabacum HOM05D005509 ORTHO05D006411 4.2e-32 141.0 82 82.9
QL08p059131 Quercus lobata HOM05D005509 ORTHO05D006411 5.4e-32 140.6 82 84.1
CSS0042515 Camellia sinensis var. sinensis HOM05D005509 ORTHO05D006411 7.1e-32 140.2 82 84.1
Duzib106G1457 Durio zibethinus HOM05D005509 ORTHO05D006411 1.2e-31 139.4 82 84.1
Sed0018254 Sechium edule HOM05D005509 ORTHO05D006411 1.2e-31 139.4 82 84.1
CSS0029595 Camellia sinensis var. sinensis HOM05D005509 ORTHO05D006411 1.6e-31 139.0 82 84.1
Sopen05g033040 Solanum pennellii HOM05D005509 ORTHO05D006411 1.6e-31 139.0 82 81.7
PGSC0003DMG400023526 Solanum tuberosum HOM05D005509 ORTHO05D006411 2.1e-31 138.7 82 82.9
Prupe.2G232700 Prunus persica HOM05D005509 ORTHO05D006411 2.7e-31 138.3 82 82.9
ClCG07G003330 Citrullus lanatus HOM05D005509 ORTHO05D006411 4.6e-31 137.5 81 82.7
CsaV3_5G008080 Cucumis sativus L. HOM05D005509 ORTHO05D006411 4.6e-31 137.5 81 82.7
Lj8A85G36 Lonicera japonica HOM05D005509 ORTHO05D006411 4.6e-31 137.5 82 82.9
Nn2g10410 Nelumbo nucifera HOM05D005509 ORTHO05D006411 4.6e-31 137.5 82 81.7
Rhsim09G0165100 Rhododendron simsii HOM05D005509 ORTHO05D006411 4.6e-31 137.5 82 80.5
Solyc05g054560.3 Solanum lycopersicum HOM05D005509 ORTHO05D006411 6.0e-31 137.1 82 80.5
AUR62030741 Chenopodium quinoa HOM05D005509 ORTHO05D006411 1.0e-30 136.3 82 78.0
AUR62036379 Chenopodium quinoa HOM05D005509 ORTHO05D006411 1.0e-30 136.3 82 78.0
Lj5g0000580 Lotus japonicus HOM05D005509 ORTHO05D006411 1.0e-30 136.3 82 79.3
GSVIVG01016570001 Vitis vinifera HOM05D005509 ORTHO05D006411 1.3e-30 136.0 82 80.5
Aqoxy2G02060 Aquilegia oxysepala HOM05D005509 ORTHO05D006411 1.7e-30 135.6 82 80.5
CiPaw.01G284800 Carya illinoinensis HOM05D005509 ORTHO05D006411 1.7e-30 135.6 82 82.9
LjContig00357g0008800 Lotus japonicus HOM05D005509 ORTHO05D006411 2.3e-30 135.2 82 79.3
Duzib114G0718 Durio zibethinus HOM05D005509 ORTHO05D006411 6.6e-30 133.7 80 82.5
MD01G1125700 Malus domestica HOM05D005509 ORTHO05D006411 2.5e-29 131.7 82 78.0
PGSC0003DMG400027734 Solanum tuberosum HOM05D005509 ORTHO05D006411 2.5e-29 131.7 82 80.5
RcHm_v2.0_Chr1g0366461 Rosa chinensis HOM05D005509 ORTHO05D006411 3.3e-29 131.3 82 78.0
TPR.G13986 Trifolium pratense HOM05D005509 ORTHO05D006411 3.3e-29 131.3 82 76.8
Phvul.007G011900 Phaseolus vulgaris HOM05D005509 ORTHO05D006411 4.3e-29 131.0 82 75.6
Psat6g235920 Pisum sativum HOM05D005509 ORTHO05D006411 4.3e-29 131.0 82 75.6
TWI63G1706 Tripterygium wilfordii HOM05D005509 ORTHO05D006411 7.3e-29 130.2 82 76.8
Ca_11287_v3 Cicer arietinum L. HOM05D005509 ORTHO05D006411 9.6e-29 129.8 82 74.4
EL10Ac2g03407 Beta vulgaris HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 74.4
FvH4_7g22070 Fragaria vesca HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 75.6
FAN01G1468 Fragaria x ananassa HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 75.6
FAN03G3362 Fragaria x ananassa HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 75.6
FAN06G1416 Fragaria x ananassa HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 75.6
Glyma.20G099700 Glycine max HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 74.4
MBI14_g11685_MAGBIO Magnolia biondii HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 75.6
Medtr1g115285 Medicago truncatula HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 73.2
VMungo0720G2814 Vigna mungo HOM05D005509 ORTHO05D006411 1.3e-28 129.4 82 74.4
Cpa.g.sc1.389 Carica papaya HOM05D005509 ORTHO05D006411 1.6e-28 129.0 83 79.5
Nn2g12800 Nelumbo nucifera HOM05D005509 ORTHO05D006411 1.6e-28 129.0 86 79.1
FAN06G2974 Fragaria x ananassa HOM05D005509 ORTHO05D006411 2.8e-28 128.3 82 74.4
DCAR_015180 Daucus carota HOM05D005509 ORTHO05D006411 1.1e-27 126.3 83 78.3
Sopen04g005600 Solanum pennellii HOM05D005509 ORTHO05D006411 1.4e-27 125.9 82 75.6
arahy.Tifrunner.gnm1.ann1.LMNG4E Arachis hypogaea HOM05D005509 ORTHO05D006411 1.8e-27 125.6 83 75.9
Glyma.10G289200 Glycine max HOM05D005509 ORTHO05D006411 1.8e-27 125.6 82 73.2
Lalb_Chr21g0307401 Lupinus albus HOM05D005509 ORTHO05D006411 2.4e-27 125.2 83 72.3
Potri.010G207000 Populus trichocarpa HOM05D005509 ORTHO05D006411 3.1e-27 124.8 82 75.6
Lsat_1_v5_gn_8_16220 Lactuca sativa HOM05D005509 ORTHO05D006411 4.0e-27 124.4 82 79.3
ECA238G2577 Erigeron canadensis HOM05D005509 ORTHO05D006411 5.3e-27 124.0 82 74.4
Eucgr.J00034 Eucalyptus grandis HOM05D005509 ORTHO05D006411 9.0e-27 123.2 80 73.8
Lsat_1_v5_gn_2_116581 Lactuca sativa HOM05D005509 ORTHO05D006411 9.0e-27 123.2 82 73.2
BcaC07g39857 Brassica carinata HOM05D005509 ORTHO05D006411 2.0e-26 122.1 82 72.0
A09p48320 Brassica napus HOM05D005509 ORTHO05D006411 2.0e-26 122.1 82 72.0
C08p30610 Brassica napus HOM05D005509 ORTHO05D006411 2.0e-26 122.1 82 72.0
BraA09t40284Z Brassica rapa HOM05D005509 ORTHO05D006411 2.0e-26 122.1 82 72.0
Sabra08G0038700 Salix brachista HOM05D005509 ORTHO05D006411 2.0e-26 122.1 82 74.4
CANSAT56G0048 Cannabis sativa HOM05D005509 ORTHO05D006411 2.6e-26 121.7 83 75.9
CANSAT56G3940 Cannabis sativa HOM05D005509 ORTHO05D006411 2.6e-26 121.7 83 75.9
PSO339G1164 Papaver somniferum HOM05D005509 ORTHO05D006411 2.6e-26 121.7 83 72.3
PGR044G0205 Punica granatum HOM05D005509 ORTHO05D006411 3.4e-26 121.3 82 73.2
BolC8t50677H Brassica oleracea HOM05D005509 ORTHO05D006411 4.5e-26 120.9 82 70.7
AL5G36540 Arabidopsis lyrata HOM05D005509 ORTHO05D006411 5.8e-26 120.6 82 70.7
AT3G55390 Arabidopsis thaliana HOM05D005509 ORTHO05D006411 5.8e-26 120.6 82 70.7
BcaB01g00105 Brassica carinata HOM05D005509 ORTHO05D006411 5.8e-26 120.6 82 70.7
Thhalv10010742m.g Eutrema salsugineum HOM05D005509 ORTHO05D006411 5.8e-26 120.6 82 70.7
Potri.008G053500 Populus trichocarpa HOM05D005509 ORTHO05D006411 7.6e-26 120.2 82 72.0
Carub.0005s2210 Capsella rubella HOM05D005509 ORTHO05D006411 9.9e-26 119.8 82 70.7
Sp5g07080 Schrenkiella parvula HOM05D005509 ORTHO05D006411 9.9e-26 119.8 82 69.5
Aa31LG10G10410 Aethionema arabicum HOM05D005509 ORTHO05D006411 1.7e-25 119.0 82 67.1
PSO648G0089 Papaver somniferum HOM05D005509 ORTHO05D006411 1.7e-25 119.0 83 71.1
HanXRQChr08g0220491 Helianthus annuus HOM05D005509 ORTHO05D006411 2.2e-25 118.6 80 73.8
ECA233G3830 Erigeron canadensis HOM05D005509 ORTHO05D006411 2.9e-25 118.2 80 73.8
CARHR165400 Cardamine hirsuta HOM05D005509 ORTHO05D006411 3.8e-25 117.9 82 67.1
HPP92_001486 Vanilla planifolia HOM05D005509 ORTHO05D006411 3.8e-25 117.9 82 68.3
HanXRQChr14g0458211 Helianthus annuus HOM05D005509 ORTHO05D006411 1.9e-24 115.5 82 72.0
Cc02_g08060 Coffea canephora HOM05D005509 ORTHO05D006411 1.6e-23 112.5 82 70.7
Peaxi162Scf00015g01412 Petunia axillaris HOM05D005509 ORTHO05D006411 2.1e-23 112.1 74 75.7
Peaxi162Scf00760g00127 Petunia axillaris HOM05D005509 ORTHO05D006411 7.9e-23 110.2 71 74.6
CDE02G1375 Ceratophyllum demersum HOM05D005509 ORTHO05D006411 2.3e-22 108.6 82 61.0
CDE09G0335 Ceratophyllum demersum HOM05D002573 ORTHO05D002918 6.7e-22 107.1 82 62.2
Hund20028 Selenicereus undatus HOM05D005509 ORTHO05D006411 1.5e-21 105.9 68 75.0
THA.LOC104810024 Tarenaya hassleriana HOM05D005509 ORTHO05D006411 3.3e-21 104.8 82 59.8
ATR0559G011 Amborella trichopoda HOM05D005509 ORTHO05D006411 2.8e-20 101.7 89 57.3
FAN01G0775 Fragaria x ananassa HOM05D005509 ORTHO05D006411 8.1e-20 100.1 97 56.7
BcaB02g08425 Brassica carinata HOM05D005509 ORTHO05D006411 1.8e-19 99.0 74 66.2
SEGI_26621 Sequoiadendron giganteum HOM05D005509 ORTHO05D006411 1.9e-16 89.0 87 54.0
Sabra08G0038600 Salix brachista HOM05D005509 ORTHO05D006411 3.5e-15 84.7 66 66.7
Pp3c3_30480 Physcomitrium patens HOM05D005509 ORTHO05D006411 6.0e-15 84.0 77 57.1
Nitab4.5_0003969g0090 Nicotiana tabacum HOM05D005509 ORTHO05D006411 6.7e-14 80.5 82 53.7
Nitab4.5_0005525g0100 Nicotiana tabacum HOM05D005509 ORTHO05D006411 6.7e-14 80.5 82 53.7
AagrBONN_evm.TU.Sc2ySwM_117.824 Anthoceros agrestis HOM05D005509 ORTHO05D006411 5.7e-13 77.4 77 54.5
Pp3c10_18090 Physcomitrium patens HOM05D005509 ORTHO05D006411 5.7e-13 77.4 77 54.5
Nn2g12496 Nelumbo nucifera HOM05D005509 ORTHO05D006411 7.4e-13 77.0 50 76.0
Pp3c12_23720 Physcomitrium patens HOM05D005509 ORTHO05D006411 3.7e-12 74.7 77 51.9
HPP92_006606 Vanilla planifolia HOM05D005509 ORTHO05D006411 1.5e-10 69.3 53 64.2
MELO3C023854.2 Cucumis melo HOM05D005509 ORTHO05D006411 4.5e-10 67.8 44 77.3
Zm00001eb136610 Zea mays HOM05D005509 ORTHO05D006411 5.5e-08 60.8 86 40.7


User provided reference genes

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