Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.1e-32 140.2 71 100.0
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.8e-31 136.7 69 100.0
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 9.2e-28 126.3 69 89.9
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 9.2e-28 126.3 69 89.9
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 3.5e-27 124.4 69 88.4
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 7.8e-27 123.2 69 89.9
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.7e-26 122.1 68 91.2
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 2.3e-26 121.7 69 88.4
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 3.9e-26 120.9 69 88.4
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 5.0e-26 120.6 69 88.4
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.1e-25 119.4 69 85.5
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.5e-25 119.0 68 85.3
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.5e-25 119.0 69 85.5
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 1.9e-25 118.6 69 87.0
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 1.9e-25 118.6 68 88.2
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.5e-25 118.2 69 87.0
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.5e-25 118.2 69 84.1
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.5e-25 118.2 69 85.5
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.5e-25 118.2 69 84.1
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 3.3e-25 117.9 69 85.5
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 7.3e-25 116.7 71 80.3
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 7.3e-25 116.7 69 87.0
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 9.5e-25 116.3 69 82.6
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 9.5e-25 116.3 69 84.1
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.2e-24 115.9 68 85.3
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.2e-24 115.9 69 82.6
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 1.2e-24 115.9 69 84.1
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.6e-24 115.5 69 82.6
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.6e-24 115.5 69 82.6
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.6e-24 115.5 69 82.6
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.1e-24 115.2 71 78.9
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.8e-24 114.8 69 84.1
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 3.6e-24 114.4 68 79.4
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.6e-24 114.4 69 82.6
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.6e-24 114.4 69 82.6
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 3.6e-24 114.4 69 82.6
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 3.6e-24 114.4 69 79.7
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 3.6e-24 114.4 69 84.1
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 3.6e-24 114.4 68 83.8
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 4.7e-24 114.0 68 80.9
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 6.2e-24 113.6 66 84.8
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 6.2e-24 113.6 68 82.4
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 8.0e-24 113.2 70 78.6
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 8.0e-24 113.2 67 82.1
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 8.0e-24 113.2 69 82.6
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.1e-23 112.8 68 77.9
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 1.4e-23 112.5 69 82.6
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 1.4e-23 112.5 69 82.6
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.4e-23 112.5 69 79.7
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.8e-23 112.1 69 79.7
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 1.8e-23 112.1 69 79.7
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 3.1e-23 111.3 69 78.3
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 3.1e-23 111.3 67 80.6
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 4.0e-23 110.9 69 79.7
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 4.0e-23 110.9 68 80.9
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.2e-23 110.5 69 82.6
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 6.8e-23 110.2 66 81.8
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 6.8e-23 110.2 69 78.3
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 2.6e-22 108.2 69 78.3
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 2.6e-22 108.2 65 81.5
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 3.4e-22 107.8 69 78.3
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 4.4e-22 107.5 68 79.4
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 4.4e-22 107.5 68 79.4
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 9.8e-22 106.3 69 78.3
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 9.8e-22 106.3 69 78.3
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.2e-21 105.1 68 76.5
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 2.2e-21 105.1 69 73.9
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 3.7e-21 104.4 69 72.5
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 4.9e-21 104.0 69 71.0
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 8.3e-21 103.2 69 73.9
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.1e-20 102.8 71 73.2
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 1.4e-20 102.4 67 76.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.9e-20 102.1 71 71.8
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.9e-20 102.1 70 71.4
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.9e-20 102.1 71 71.8
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.9e-20 102.1 71 71.8
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.4e-20 101.7 68 73.5
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 5.4e-20 100.5 71 70.4
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 7.0e-20 100.1 68 75.0
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 9.2e-20 99.8 68 73.5
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 1.2e-19 99.4 67 74.6
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 2.1e-19 98.6 67 71.6
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 4.6e-19 97.4 66 74.2
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.0e-18 96.3 70 65.7
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.0e-18 96.3 70 65.7
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 3.9e-18 94.4 69 71.0
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 5.1e-18 94.0 70 64.3
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 5.1e-18 94.0 70 64.3
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 5.1e-18 94.0 70 64.3
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 5.1e-18 94.0 70 64.3
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 8.6e-18 93.2 68 67.6
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.5e-17 92.4 64 68.8
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 9.5e-17 89.7 66 71.2
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 1.2e-16 89.4 64 70.3
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.6e-16 89.0 49 87.8
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 1.6e-16 89.0 64 70.3
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 4.7e-16 87.4 70 64.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 1.1e-15 86.3 53 77.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.4e-15 85.9 49 79.6
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.1e-15 84.7 49 81.6
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 4.0e-15 84.3 60 70.0
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 6.8e-15 83.6 50 84.0
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 3.4e-14 81.3 66 60.6
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.7e-13 79.0 49 77.6
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 5.4e-12 73.9 67 55.2
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 1.2e-11 72.8 57 63.2
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.6e-11 70.9 42 78.6
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.2e-07 57.4 71 47.9
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 6.8e-07 57.0 56 55.4
Sabra11G0008100 Salix brachista HOM05D000015 ORTHO05D009146 8.9e-07 56.6 57 50.9
HanXRQChr15g0470561 Helianthus annuus HOM05D000015 ORTHO05D009146 1.2e-06 56.2 57 50.9
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 1.5e-06 55.8 57 52.6
Lj1A1236G69 Lonicera japonica HOM05D000015 ORTHO05D009146 2.0e-06 55.5 57 50.9
Dinv13936 Davidia involucrata HOM05D000015 ORTHO05D009146 2.6e-06 55.1 57 50.9
CANSAT56G2899 Cannabis sativa HOM05D000015 ORTHO05D009146 7.6e-06 53.5 56 48.2
QL03p004924 Quercus lobata HOM05D000015 ORTHO05D009146 7.6e-06 53.5 57 50.9
QL05p071991 Quercus lobata HOM05D000015 ORTHO05D009146 7.6e-06 53.5 57 50.9


User provided reference genes

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