Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 4.9e-241 837.4 433 100.0
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.8e-238 828.9 442 97.7
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 5.2e-198 694.5 442 80.8
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.7e-169 599.7 444 72.3
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 6.1e-167 591.3 439 69.7
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 1.3e-164 583.6 428 72.0
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.7e-162 575.9 433 68.4
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 3.0e-161 572.4 438 68.9
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.5e-160 569.3 406 70.7
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.1e-158 563.9 436 69.0
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.0e-157 559.7 427 68.6
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 7.5e-157 557.8 443 64.3
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.9e-156 555.8 438 66.9
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.1e-155 553.9 402 69.9
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.1e-155 553.9 439 66.3
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.9e-155 553.1 440 65.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 3.2e-155 552.4 435 66.2
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 3.2e-155 552.4 444 65.8
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.6e-154 548.5 438 66.7
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 1.0e-153 547.4 405 70.6
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 5.1e-153 545.0 434 66.6
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 6.6e-153 544.7 436 66.1
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.6e-152 541.6 438 65.8
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 5.6e-152 541.6 437 65.7
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 9.5e-152 540.8 445 63.1
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 6.2e-151 538.1 410 67.8
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.1e-150 537.3 434 66.4
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 4.0e-150 535.4 437 65.0
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 8.9e-150 534.3 443 64.1
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 2.0e-149 533.1 428 66.4
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 2.0e-149 533.1 437 64.5
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.0e-149 533.1 402 68.9
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 9.9e-149 530.8 433 65.1
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 9.9e-149 530.8 402 68.4
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 4.9e-148 528.5 440 65.2
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 6.4e-148 528.1 400 68.0
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 8.3e-148 527.7 445 62.9
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.9e-147 526.6 403 67.5
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 5.4e-147 525.0 447 61.5
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 5.4e-147 525.0 403 67.0
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 7.1e-147 524.6 447 63.3
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 7.1e-147 524.6 403 67.2
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 3.5e-146 522.3 401 67.8
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 7.8e-146 521.2 424 65.1
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.5e-144 516.9 403 63.5
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 5.6e-144 515.0 431 61.0
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 9.5e-144 514.2 379 66.5
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 9.5e-144 514.2 447 60.4
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.6e-143 513.5 444 61.3
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 2.8e-143 512.7 432 62.5
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 3.6e-143 512.3 401 62.8
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 6.8e-142 508.1 409 64.5
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 5.8e-141 505.0 409 60.6
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 9.9e-141 504.2 401 66.3
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 6.4e-140 501.5 389 67.4
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.4e-139 500.4 406 64.5
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.3e-135 487.3 429 60.4
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 3.6e-135 485.7 344 69.8
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 3.4e-125 452.6 403 57.1
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 3.4e-125 452.6 430 54.9
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.5e-125 452.2 409 55.0
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 5.8e-125 451.8 397 60.7
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 9.9e-125 451.1 422 55.7
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.7e-124 450.3 344 68.9
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 2.2e-124 449.9 427 54.6
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 2.9e-124 449.5 432 55.1
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 8.4e-124 448.0 427 54.6
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 8.4e-124 448.0 401 59.6
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 7.1e-123 444.9 428 53.3
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.6e-122 443.7 431 54.5
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.6e-122 443.7 431 54.5
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 6.0e-122 441.8 422 54.7
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 7.9e-122 441.4 423 55.8
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.3e-121 440.7 422 54.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.3e-121 440.7 396 56.8
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.1e-113 412.1 346 62.4
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.3e-111 407.5 352 59.1
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 5.8e-109 398.7 337 61.4
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.3e-105 386.7 382 53.1
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.9e-105 386.0 382 53.1
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 9.7e-104 381.3 315 63.2
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.1e-102 377.9 312 64.1
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 8.5e-100 368.2 322 58.7
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 6.3e-95 352.1 420 45.2
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.3e-92 344.4 374 49.7
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.4e-86 324.3 388 45.6
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.0e-85 320.5 410 45.1
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 2.2e-84 317.0 390 43.3
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 9.4e-75 285.0 304 49.3
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.3e-68 264.6 236 58.5
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.5e-67 261.2 304 47.0
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.8e-62 244.2 394 38.3
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 3.3e-59 233.4 373 39.1
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 4.0e-57 226.5 243 52.7
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 5.4e-54 216.1 590 27.5
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 3.2e-46 190.3 247 42.9
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.7e-39 166.8 116 72.4
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 3.2e-38 163.7 133 59.4
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 5.6e-35 152.9 129 62.8
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.1e-25 122.1 133 54.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 6.8e-25 119.4 374 28.1
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 7.6e-24 115.9 81 76.5
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 9.9e-24 115.5 80 72.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 3.8e-23 113.6 105 60.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 1.4e-22 111.7 78 70.5
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.0e-20 105.5 84 65.5
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.6e-18 98.2 250 30.0
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.9e-15 86.7 62 75.8
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.9e-14 84.7 80 56.2
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.2e-13 82.0 54 75.9
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 6.6e-12 76.3 64 59.4
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 5.3e-09 66.6 44 77.3
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 2.9e-07 60.8 39 69.2


User provided reference genes

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