Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 7.9e-194 680.2 339 100.0
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 1.7e-172 609.4 339 88.5
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 9.4e-171 603.6 296 100.0
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.7e-167 592.8 339 86.4
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 8.2e-167 590.5 339 86.4
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 3.0e-161 572.0 340 83.8
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 3.9e-161 571.6 378 76.7
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 1.1e-160 570.1 339 82.3
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 3.3e-160 568.5 340 82.6
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 1.7e-159 566.2 339 82.3
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 2.2e-159 565.8 339 84.1
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 5.3e-158 561.2 339 81.4
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.2e-157 560.1 340 81.8
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 2.6e-157 558.9 340 79.4
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 2.2e-156 555.8 340 82.1
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 3.8e-156 555.1 341 81.5
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 8.5e-156 553.9 341 80.4
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 1.9e-155 552.7 346 80.1
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 1.9e-155 552.7 340 81.2
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 1.9e-155 552.7 340 81.2
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 7.2e-155 550.8 340 80.9
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 6.1e-154 547.7 340 80.0
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 1.4e-153 546.6 340 80.0
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 4.0e-153 545.0 341 78.0
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 8.8e-153 543.9 340 79.4
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 4.4e-152 541.6 340 79.7
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 7.5e-152 540.8 339 79.4
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 1.4e-150 536.6 339 78.5
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 5.3e-150 534.6 340 77.4
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 7.0e-150 534.3 344 75.6
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 7.0e-150 534.3 339 76.1
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 1.6e-149 533.1 339 78.2
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 5.9e-149 531.2 339 77.9
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 7.7e-149 530.8 340 79.1
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 2.2e-148 529.3 341 76.5
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 3.8e-148 528.5 340 77.1
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 1.1e-147 526.9 339 77.3
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 1.5e-147 526.6 340 76.5
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 2.5e-147 525.8 340 75.9
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 5.5e-147 524.6 339 77.9
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 2.1e-146 522.7 306 84.0
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 2.7e-146 522.3 340 77.1
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 3.6e-146 521.9 340 76.2
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 6.1e-146 521.2 339 74.0
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 6.1e-146 521.2 340 76.8
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 6.1e-146 521.2 342 76.6
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.4e-145 520.0 341 76.5
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 2.3e-145 519.2 340 77.4
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 2.3e-145 519.2 340 75.9
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 3.0e-145 518.8 339 73.7
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 3.0e-145 518.8 339 76.7
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.0e-145 518.8 339 76.7
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 5.2e-145 518.1 339 76.7
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 8.8e-145 517.3 339 76.4
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.2e-144 516.9 341 76.0
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.5e-144 516.5 339 73.2
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 4.4e-144 515.0 340 74.4
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 5.7e-144 514.6 339 73.7
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.7e-143 513.1 339 73.2
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 1.7e-143 513.1 341 75.1
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 2.2e-143 512.7 343 74.6
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 6.3e-143 511.1 340 75.9
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 6.3e-143 511.1 341 74.5
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 8.3e-143 510.8 340 73.8
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 5.4e-142 508.1 339 74.9
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 7.0e-142 507.7 341 74.2
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 1.2e-141 506.9 339 71.7
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 1.6e-141 506.5 360 71.7
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-141 506.5 340 74.7
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.0e-141 506.1 339 71.4
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 2.7e-141 505.8 341 73.6
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 3.5e-141 505.4 340 72.9
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 1.3e-140 503.4 364 70.1
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 1.1e-139 500.4 341 72.7
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 1.9e-139 499.6 339 70.8
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 2.5e-139 499.2 340 75.3
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 2.5e-139 499.2 340 75.3
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 4.2e-139 498.4 340 74.1
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 1.6e-138 496.5 339 71.7
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 2.1e-138 496.1 348 72.1
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 4.7e-138 495.0 352 72.2
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 8.0e-138 494.2 355 68.5
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 1.0e-137 493.8 364 67.3
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 2.6e-136 489.2 339 72.0
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 1.3e-135 486.9 345 72.8
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.9e-135 485.0 335 72.5
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 1.7e-132 476.5 341 70.7
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 2.9e-127 459.1 345 67.5
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 6.4e-127 458.0 345 67.2
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 1.4e-126 456.8 359 66.3
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 3.2e-126 455.7 310 75.5
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 4.1e-126 455.3 342 69.3
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 8.6e-124 447.6 257 84.4
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 1.1e-123 447.2 352 63.6
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 5.8e-120 434.9 341 66.0
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 5.8e-120 434.9 254 81.9
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 1.7e-116 423.3 352 59.4
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.8e-113 413.3 325 64.9
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 3.1e-113 412.5 257 75.5
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.2e-112 410.6 255 78.8
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.8e-105 386.7 267 70.8
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 9.9e-104 380.9 247 72.1
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 1.0e-100 370.9 268 65.7
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 1.3e-100 370.5 350 56.3
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.7e-100 370.2 293 66.6
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 2.8e-98 362.8 347 55.0
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.4e-96 355.9 357 51.3
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.3e-95 354.0 225 76.0
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 1.7e-95 353.6 347 53.9
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 3.2e-94 349.4 321 62.0
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 7.1e-94 348.2 353 50.4
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 2.1e-93 346.7 244 68.9
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 4.0e-89 332.4 377 47.7
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 8.7e-76 288.1 227 62.1
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 9.0e-65 251.5 336 45.5
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.5e-64 250.8 335 46.0
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.2e-56 224.6 260 46.2
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 7.2e-54 215.3 236 54.2
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 3.3e-51 206.5 150 66.7
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 4.5e-48 196.1 302 42.4
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 8.0e-37 158.7 95 77.9
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 3.0e-36 156.8 343 31.8
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 1.4e-33 147.9 124 61.3
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.5e-30 137.9 134 58.2
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.8e-25 120.9 60 88.3
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-24 117.9 125 50.4
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 3.5e-24 116.7 201 35.3
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 4.5e-24 116.3 80 75.0
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 2.9e-23 113.6 84 71.4
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 4.4e-19 99.8 83 62.7
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 2.8e-18 97.1 73 69.9
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 7.8e-16 89.0 79 58.2
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 5.6e-06 56.2 102 42.2


User provided reference genes

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