Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.4e-198 696.4 433 100.0
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 2.2e-180 636.0 315 100.0
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 4.0e-118 429.1 442 71.9
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 4.6e-98 362.5 458 60.9
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.1e-94 349.7 461 61.2
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 1.0e-89 334.7 462 60.2
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 4.8e-87 325.9 435 59.8
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.4e-81 307.8 457 57.3
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.4e-81 307.8 458 57.4
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.1e-80 304.7 462 58.7
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 5.7e-80 302.4 457 56.5
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 7.4e-80 302.0 457 56.2
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 6.3e-79 298.9 457 54.7
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.4e-78 297.7 457 55.6
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 5.9e-77 292.4 457 55.6
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 7.7e-77 292.0 462 56.1
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 1.7e-76 290.8 463 57.0
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 4.2e-75 286.2 464 57.1
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.0e-73 281.6 460 55.9
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 8.8e-73 278.5 443 57.3
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 8.8e-73 278.5 512 52.0
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 4.2e-67 259.6 465 52.9
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.6e-66 256.5 469 49.5
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 4.7e-66 256.1 463 49.2
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.0e-65 255.0 456 53.1
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.2e-64 251.5 457 49.0
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 5.7e-64 249.2 462 50.6
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.3e-63 248.1 460 54.1
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.3e-63 248.1 517 35.4
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 2.4e-62 243.8 463 52.5
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 3.1e-62 243.4 461 49.2
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.6e-61 241.1 460 52.6
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 2.0e-61 240.7 461 49.0
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.9e-61 239.2 464 52.4
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.9e-59 234.2 451 51.9
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.9e-59 234.2 462 51.9
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 2.5e-59 233.8 458 52.2
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 2.6e-56 223.8 452 48.9
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 5.7e-56 222.6 460 51.7
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.7e-55 221.1 454 49.8
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.7e-55 221.1 457 49.2
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 2.2e-55 220.7 454 49.6
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 4.9e-55 219.5 450 50.0
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 6.3e-55 219.2 441 53.3
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.1e-54 218.4 460 51.3
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.8e-54 217.6 462 47.6
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 1.8e-54 217.6 455 50.1
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.2e-53 214.9 454 48.9
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 2.7e-53 213.8 452 49.3
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 2.7e-53 213.8 465 38.9
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 3.5e-53 213.4 454 50.9
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 5.9e-53 212.6 430 51.9
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.3e-52 211.5 451 49.0
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 2.9e-52 210.3 455 48.8
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 5.0e-52 209.5 452 50.4
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 5.0e-52 209.5 436 50.7
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 2.5e-51 207.2 340 40.0
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 1.6e-50 204.5 450 48.4
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 3.6e-50 203.4 435 49.0
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 4.7e-50 203.0 318 41.2
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 6.2e-50 202.6 445 46.7
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.3e-49 200.7 346 39.0
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.5e-48 198.0 450 48.0
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 2.0e-48 197.6 473 48.4
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 5.8e-48 196.1 466 48.1
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.7e-47 194.5 458 46.7
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 3.5e-45 186.8 411 49.9
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.3e-44 184.9 359 36.5
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 8.6e-44 182.2 458 45.9
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 1.9e-43 181.0 449 43.9
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 4.3e-43 179.9 453 45.5
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 1.2e-42 178.3 440 48.6
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 1.6e-42 177.9 305 38.0
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 2.1e-42 177.6 438 46.1
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 5.2e-41 172.9 438 46.3
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 8.9e-41 172.2 443 47.0
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 8.9e-41 172.2 445 46.3
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 2.0e-40 171.0 445 48.3
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 2.6e-40 170.6 443 46.0
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 7.5e-40 169.1 438 45.4
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-39 168.3 440 48.0
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 4.9e-39 166.4 441 47.6
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 3.2e-38 163.7 436 45.4
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 5.4e-38 162.9 443 47.6
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 5.4e-38 162.9 443 47.6
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 7.1e-38 162.5 462 42.6
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 2.1e-37 161.0 451 47.2
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 3.9e-36 156.8 448 44.0
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 5.1e-36 156.4 235 46.4
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 4.0e-33 146.7 291 35.7
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 2.0e-32 144.4 431 45.0
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.5e-27 127.5 271 35.4
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.8e-25 121.3 327 29.1
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 1.3e-23 115.2 302 50.0
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.9e-22 111.3 202 40.6
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.3e-18 98.6 316 26.6
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 1.6e-18 98.2 349 29.5
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.4e-17 95.1 62 72.6
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 7.6e-16 89.4 62 71.0
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.6e-13 81.6 45 80.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 1.9e-11 74.7 52 67.3
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 6.2e-10 69.7 435 27.1
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.0e-09 67.0 41 65.9
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 5.3e-09 66.6 52 63.5
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 7.1e-06 56.2 41 56.1


User provided reference genes

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