Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0870F.1_g230820 Hydrangea macrophylla HOM05D002388 ORTHO05D004745 1.3e-66 256.1 124 100.0
Dinv28990 Davidia involucrata HOM05D002388 ORTHO05D004745 3.2e-36 155.2 125 67.2
Dinv25247 Davidia involucrata HOM05D002388 ORTHO05D004745 1.5e-33 146.4 125 65.6
Hma1.2p1_0572F.1_g181220 Hydrangea macrophylla HOM05D002388 ORTHO05D004745 9.1e-31 137.1 121 62.8
vmacro00293 Vaccinium macrocarpon HOM05D002388 ORTHO05D004745 1.0e-29 133.7 122 62.3
vmacro00300 Vaccinium macrocarpon HOM05D002388 ORTHO05D004745 1.0e-29 133.7 122 62.3
Actinidia03351 Actinidia chinensis HOM05D002388 ORTHO05D004745 2.9e-29 132.1 125 60.0
CSS0030959 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D004745 3.8e-29 131.7 125 60.8
Rhsim11G0019800 Rhododendron simsii HOM05D002388 ORTHO05D004745 1.2e-27 126.7 122 59.0
Sabra03G0064500 Salix brachista HOM05D002388 ORTHO05D004745 9.1e-23 110.5 128 51.6
Cc08_g03410 Coffea canephora HOM05D002388 ORTHO05D004745 1.7e-21 106.3 124 46.8
Potri.001G138200 Populus trichocarpa HOM05D002388 ORTHO05D004745 1.7e-21 106.3 126 50.0
Potri.003G095600 Populus trichocarpa HOM05D002388 ORTHO05D004745 1.7e-21 106.3 128 50.8
Cpa.g.sc90.11 Carica papaya HOM05D002388 ORTHO05D004745 3.8e-21 105.1 124 47.6
Cfa012499 Carpinus fangiana HOM05D002388 ORTHO05D004745 5.0e-21 104.8 125 52.0
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 6.5e-21 104.4 126 50.0
Atru.chr6.1616 Acer truncatum HOM05D002388 ORTHO05D004745 8.5e-21 104.0 121 49.6
TWI15G0743 Tripterygium wilfordii HOM05D002388 ORTHO05D004745 9.4e-20 100.5 124 50.0
GSVIVG01013067001 Vitis vinifera HOM05D002388 ORTHO05D004745 9.4e-20 100.5 125 48.0
SGA_v2.0_scaffold20G09262 Striga asiatica HOM05D002388 ORTHO05D004745 8.0e-19 97.4 120 43.3
Duzib205G0909 Durio zibethinus HOM05D002388 ORTHO05D004745 1.4e-18 96.7 122 50.8
PGSC0003DMG400014808 Solanum tuberosum HOM05D002388 ORTHO05D004745 1.8e-18 96.3 124 43.5
Ciclev10002550m.g Citrus clementina HOM05D002388 ORTHO05D004745 3.0e-18 95.5 121 51.2
QL12p001291 Quercus lobata HOM05D002388 ORTHO05D004745 5.2e-18 94.7 123 50.4
DCAR_004282 Daucus carota HOM05D002388 ORTHO05D004745 6.8e-18 94.4 124 47.6
Prupe.5G029700 Prunus persica HOM05D002388 ORTHO05D004745 1.5e-17 93.2 120 50.8
Duzib068G1098 Durio zibethinus HOM05D002388 ORTHO05D004745 2.0e-17 92.8 122 49.2
Ciclev10002623m.g Citrus clementina HOM05D002388 ORTHO05D004745 2.6e-17 92.4 121 51.2
Nitab4.5_0000529g0040 Nicotiana tabacum HOM05D002388 ORTHO05D004745 3.4e-17 92.0 124 40.3
TWI60G0128 Tripterygium wilfordii HOM05D002388 ORTHO05D004745 3.4e-17 92.0 124 47.6
Manes.15G188200 Manihot esculenta HOM05D002388 ORTHO05D004745 4.4e-17 91.7 122 47.5
Psat4g121840 Pisum sativum HOM05D002388 ORTHO05D004745 5.7e-17 91.3 124 50.0
Gohir.A03G000041 Gossypium hirsutum HOM05D002388 ORTHO05D004745 7.5e-17 90.9 128 46.9
Solyc08g076510.3 Solanum lycopersicum HOM05D002388 ORTHO05D004745 7.5e-17 90.9 124 43.5
Sopen08g025090 Solanum pennellii HOM05D002388 ORTHO05D004745 7.5e-17 90.9 124 43.5
Peaxi162Scf00170g00816 Petunia axillaris HOM05D002388 ORTHO05D004745 9.8e-17 90.5 124 42.7
CANSAT35G0066 Cannabis sativa HOM05D002388 ORTHO05D004745 1.3e-16 90.1 126 49.2
Ca_22658_v3 Cicer arietinum L. HOM05D002388 ORTHO05D004745 1.3e-16 90.1 126 46.0
Eucgr.E00235 Eucalyptus grandis HOM05D002388 ORTHO05D004745 1.7e-16 89.7 121 44.6
Haze_08172 Corylus avellana HOM05D002388 ORTHO05D004745 2.2e-16 89.4 100 53.0
Gohir.D03G175500 Gossypium hirsutum HOM05D002388 ORTHO05D004745 2.2e-16 89.4 128 46.9
MD06G1025400 Malus domestica HOM05D002388 ORTHO05D004745 3.7e-16 88.6 120 46.7
Cfa012512 Carpinus fangiana HOM05D002388 ORTHO05D004745 4.8e-16 88.2 125 48.8
Cfa021255 Carpinus fangiana HOM05D002388 ORTHO05D004745 4.8e-16 88.2 125 48.8
Oeu028869.2 Olea europaea HOM05D002388 ORTHO05D004745 8.3e-16 87.4 124 41.9
RcHm_v2.0_Chr7g0211591 Rosa chinensis HOM05D002388 ORTHO05D004745 1.4e-15 86.7 126 46.8
AT1G32260 Arabidopsis thaliana HOM05D002388 ORTHO05D004745 1.8e-15 86.3 126 41.3
Ciclev10003612m.g Citrus clementina HOM05D002388 ORTHO05D004745 1.8e-15 86.3 106 49.1
Gorai.003G184500 Gossypium raimondii HOM05D002388 ORTHO05D004745 1.8e-15 86.3 128 46.1
Nitab4.5_0001595g0030 Nicotiana tabacum HOM05D002388 ORTHO05D004745 1.8e-15 86.3 124 40.3
Nn1g00186 Nelumbo nucifera HOM05D002388 ORTHO05D004745 3.1e-15 85.5 128 46.1
COL.COLO4_16959 Corchorus olitorius HOM05D002388 ORTHO05D004745 5.4e-15 84.7 126 44.4
TPR.G8093 Trifolium pratense HOM05D002388 ORTHO05D004745 5.4e-15 84.7 124 47.6
Haze_08151 Corylus avellana HOM05D002388 ORTHO05D004745 7.0e-15 84.3 125 48.8
Gohir.A08G154400 Gossypium hirsutum HOM05D002388 ORTHO05D004745 7.0e-15 84.3 124 47.6
Thecc.03G308500 Theobroma cacao HOM05D002388 ORTHO05D004745 7.0e-15 84.3 122 48.4
TPR.G3315 Trifolium pratense HOM05D002388 ORTHO05D004745 1.6e-14 83.2 124 47.6
Lj2g0009669 Lotus japonicus HOM05D002388 ORTHO05D004745 2.0e-14 82.8 122 50.0
CiPaw.11G097400 Carya illinoinensis HOM05D002388 ORTHO05D004745 2.7e-14 82.4 124 44.4
Thhalv10008414m.g Eutrema salsugineum HOM05D002388 ORTHO05D004745 3.5e-14 82.0 123 43.9
Ciclev10003879m.g Citrus clementina HOM05D002388 ORTHO05D004745 4.5e-14 81.6 110 48.2
arahy.Tifrunner.gnm1.ann1.DQ9IRR Arachis hypogaea HOM05D002388 ORTHO05D004745 1.0e-13 80.5 124 45.2
arahy.Tifrunner.gnm1.ann1.JAYF1A Arachis hypogaea HOM05D002388 ORTHO05D004745 1.0e-13 80.5 124 45.2
Cfa012514 Carpinus fangiana HOM05D002388 ORTHO05D004745 1.0e-13 80.5 123 43.9
Lalb_Chr16g0381151 Lupinus albus HOM05D002388 ORTHO05D004745 1.0e-13 80.5 124 42.7
THA.LOC104814421 Tarenaya hassleriana HOM05D002388 ORTHO05D004745 1.0e-13 80.5 124 39.5
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 1.3e-13 80.1 121 43.0
EL10Ac5g12028 Beta vulgaris HOM05D002388 ORTHO05D004745 1.3e-13 80.1 129 44.2
FAN18G3398 Fragaria x ananassa HOM05D002388 ORTHO05D004745 1.7e-13 79.7 125 42.4
PGR042G0491 Punica granatum HOM05D002388 ORTHO05D004745 1.7e-13 79.7 121 44.6
AUR62018656 Chenopodium quinoa HOM05D002388 ORTHO05D004745 2.2e-13 79.3 124 41.9
Ca_25190_v3 Cicer arietinum L. HOM05D002388 ORTHO05D004745 2.9e-13 79.0 125 44.0
Medtr8g066470 Medicago truncatula HOM05D002388 ORTHO05D004745 2.9e-13 79.0 129 41.9
AL1G46410 Arabidopsis lyrata HOM05D002388 ORTHO05D004745 3.8e-13 78.6 125 39.2
FvH4_5g22890 Fragaria vesca HOM05D002388 ORTHO05D004745 3.8e-13 78.6 125 42.4
FAN18G3813 Fragaria x ananassa HOM05D002388 ORTHO05D004745 3.8e-13 78.6 125 42.4
Gohir.D08G175075 Gossypium hirsutum HOM05D002388 ORTHO05D004745 5.0e-13 78.2 124 44.4
Gorai.004G182900 Gossypium raimondii HOM05D002388 ORTHO05D004745 5.0e-13 78.2 126 46.8
Psat2g138920 Pisum sativum HOM05D002388 ORTHO05D004745 5.0e-13 78.2 125 44.8
AUR62007343 Chenopodium quinoa HOM05D002388 ORTHO05D004745 6.5e-13 77.8 124 41.9
MSTRG.13744 Avicennia marina HOM05D002388 ORTHO05D004745 1.1e-12 77.0 120 41.7
CARHR031630 Cardamine hirsuta HOM05D002388 ORTHO05D004745 1.1e-12 77.0 126 42.9
FAN08G3109 Fragaria x ananassa HOM05D002388 ORTHO05D004745 1.1e-12 77.0 125 42.4
FAN04G3082 Fragaria x ananassa HOM05D002388 ORTHO05D004745 1.5e-12 76.6 125 41.6
Carub.0001s3059 Capsella rubella HOM05D002388 ORTHO05D004745 1.9e-12 76.3 127 41.7
FAN13G2852 Fragaria x ananassa HOM05D002388 ORTHO05D004745 7.2e-12 74.3 126 42.1
Medtr5g029600 Medicago truncatula HOM05D002388 ORTHO05D004745 9.4e-12 73.9 121 44.6
Nn3g19408 Nelumbo nucifera HOM05D002388 ORTHO05D004745 1.6e-11 73.2 123 39.8
DCAR_008237 Daucus carota HOM05D002388 ORTHO05D004745 2.1e-11 72.8 125 41.6
Lalb_Chr09g0325541 Lupinus albus HOM05D002388 ORTHO05D004745 2.1e-11 72.8 137 38.7
Aa31LG2G13740 Aethionema arabicum HOM05D002388 ORTHO05D004745 4.7e-11 71.6 122 41.8
Rhsim07G0131100 Rhododendron simsii HOM05D002388 ORTHO05D004745 4.7e-11 71.6 127 44.1
A09p33880 Brassica napus HOM05D002388 ORTHO05D004745 1.8e-10 69.7 122 36.9
BraA09t38936Z Brassica rapa HOM05D002388 ORTHO05D004745 1.8e-10 69.7 122 36.9
Haze_09168 Corylus avellana HOM05D002388 ORTHO05D004745 2.3e-10 69.3 95 47.4
ECA240G1207 Erigeron canadensis HOM05D002388 ORTHO05D004745 2.3e-10 69.3 120 36.7
THA.LOC104798489 Tarenaya hassleriana HOM05D002388 ORTHO05D004745 2.3e-10 69.3 121 37.2
Aa31LG9G15470 Aethionema arabicum HOM05D002388 ORTHO05D004745 4.0e-10 68.6 124 37.1
TPR.G3332 Trifolium pratense HOM05D000188 ORTHO05D000362 4.0e-10 68.6 116 40.5
MSTRG.1999 Avicennia marina HOM05D002388 ORTHO05D004745 6.8e-10 67.8 126 40.5
BcaB07g32907 Brassica carinata HOM05D002388 ORTHO05D004745 8.8e-10 67.4 121 37.2
Hund11196 Selenicereus undatus HOM05D002388 ORTHO05D004745 8.8e-10 67.4 126 40.5
Glyma.01G015300 Glycine max HOM05D002388 ORTHO05D004745 1.2e-09 67.0 124 41.9
Sp1g27940 Schrenkiella parvula HOM05D002388 ORTHO05D004745 1.2e-09 67.0 121 36.4
Ciclev10003604m.g Citrus clementina HOM05D002388 ORTHO05D004745 1.5e-09 66.6 121 42.1
VMungo0251G2329 Vigna mungo HOM05D002388 ORTHO05D004745 1.5e-09 66.6 125 38.4
BcaB02g09426 Brassica carinata HOM05D002388 ORTHO05D004745 5.7e-09 64.7 131 38.2
Migut.E00774 Erythranthe guttata HOM05D002388 ORTHO05D004745 5.7e-09 64.7 124 37.1
Sc22g0001810 Simmondsia chinensis HOM05D002388 ORTHO05D004745 1.3e-08 63.5 126 37.3
Glyma.09G207100 Glycine max HOM05D002388 ORTHO05D004745 1.7e-08 63.2 124 40.3
AL4G31530 Arabidopsis lyrata HOM05D002388 ORTHO05D004745 2.2e-08 62.8 73 47.9
Haze_08158 Corylus avellana HOM05D002388 ORTHO05D004745 2.2e-08 62.8 84 41.7
BcaC05g27267 Brassica carinata HOM05D002388 ORTHO05D004745 6.3e-08 61.2 121 36.4
C05p31720 Brassica napus HOM05D002388 ORTHO05D004745 6.3e-08 61.2 121 36.4
BolC5t31898H Brassica oleracea HOM05D002388 ORTHO05D004745 6.3e-08 61.2 121 36.4
Phvul.003G283700 Phaseolus vulgaris HOM05D002388 ORTHO05D004745 1.1e-07 60.5 126 38.9
Sp4g17700 Schrenkiella parvula HOM05D002388 ORTHO05D004745 3.1e-07 58.9 122 36.1
CARHR129630 Cardamine hirsuta HOM05D002388 ORTHO05D004745 4.1e-07 58.5 123 37.4
VMungo1215G2489 Vigna mungo HOM05D002388 ORTHO05D004745 4.1e-07 58.5 125 38.4
CAN.G1298.37 Capsicum annuum HOM05D002388 ORTHO05D004745 1.2e-06 57.0 76 39.5
ClCG10G001380 Citrullus lanatus HOM05D002388 ORTHO05D004745 2.7e-06 55.8 123 39.8
Sed0016521 Sechium edule HOM05D002388 ORTHO05D004745 2.7e-06 55.8 69 44.9
Hund14363 Selenicereus undatus HOM05D002388 ORTHO05D004745 2.7e-06 55.8 127 36.2
CsaV3_3G001460 Cucumis sativus L. HOM05D002388 ORTHO05D004745 3.5e-06 55.5 123 36.6
Phvul.002G137900 Phaseolus vulgaris HOM05D002388 ORTHO05D004745 4.5e-06 55.1 126 38.9
Carub.0004s1717 Capsella rubella HOM05D002388 ORTHO05D004745 5.9e-06 54.7 121 35.5
Thhalv10017272m.g Eutrema salsugineum HOM05D002388 ORTHO05D004745 7.7e-06 54.3 124 33.1


User provided reference genes

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