Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 8.3e-42 173.3 90 100.0
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.2e-35 152.9 88 86.4
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 5.8e-35 150.6 84 91.7
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.7e-34 149.1 84 89.3
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 1.7e-34 149.1 84 86.9
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.7e-34 147.9 84 88.1
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 6.4e-34 147.1 84 86.9
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 6.4e-34 147.1 84 85.7
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 8.3e-34 146.7 84 89.3
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 1.4e-33 146.0 88 84.1
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 1.4e-33 146.0 84 86.9
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 1.9e-33 145.6 84 86.9
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.9e-33 145.6 84 85.7
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.4e-33 145.2 84 86.9
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 2.4e-33 145.2 84 88.1
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 3.2e-33 144.8 84 84.5
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 4.1e-33 144.4 84 85.7
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 7.0e-33 143.7 84 83.3
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.6e-32 142.5 84 84.5
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 2.1e-32 142.1 80 88.8
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 2.1e-32 142.1 81 87.7
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.6e-32 141.0 84 85.7
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 4.6e-32 141.0 84 83.3
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 4.6e-32 141.0 84 83.3
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 4.6e-32 141.0 90 78.9
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 1.0e-31 139.8 84 77.4
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 1.0e-31 139.8 78 89.7
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.3e-31 139.4 84 84.5
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.3e-31 139.4 84 84.5
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.7e-31 139.0 83 83.1
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.7e-31 139.0 87 79.3
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 2.3e-31 138.7 84 78.6
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.9e-31 137.9 80 85.0
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.9e-31 137.9 80 85.0
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 8.6e-31 136.7 84 82.1
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.1e-30 136.3 84 79.8
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.1e-30 136.3 83 79.5
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 1.5e-30 136.0 84 77.4
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 1.9e-30 135.6 80 83.8
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 1.9e-30 135.6 80 83.8
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 1.9e-30 135.6 84 77.4
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 3.3e-30 134.8 87 81.6
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 3.3e-30 134.8 79 84.8
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 4.3e-30 134.4 79 84.8
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 7.3e-30 133.7 79 83.5
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 7.3e-30 133.7 84 77.4
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 7.3e-30 133.7 84 79.8
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 9.5e-30 133.3 84 79.8
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 9.5e-30 133.3 84 79.8
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.2e-29 132.9 84 79.8
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.6e-29 132.5 82 76.8
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 3.6e-29 131.3 85 77.6
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 4.7e-29 131.0 85 77.6
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 4.7e-29 131.0 79 82.3
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 8.1e-29 130.2 84 78.6
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 8.1e-29 130.2 84 77.4
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.8e-28 129.0 85 75.3
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.8e-28 129.0 85 75.3
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.3e-28 128.6 85 76.5
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 2.3e-28 128.6 85 75.3
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 3.1e-28 128.3 85 75.3
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 5.2e-28 127.5 85 74.1
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 5.2e-28 127.5 85 75.3
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 5.2e-28 127.5 85 74.1
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 6.8e-28 127.1 85 75.3
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.2e-27 126.3 83 77.1
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 7.5e-27 123.6 84 72.6
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 7.5e-27 123.6 85 76.5
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 9.9e-27 123.2 84 73.8
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.7e-26 122.5 75 81.3
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 2.9e-26 121.7 84 75.0
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.9e-26 121.7 73 82.2
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 1.1e-25 119.8 83 71.1
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 1.9e-25 119.0 88 70.5
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 2.4e-25 118.6 84 70.2
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 3.2e-25 118.2 81 74.1
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 4.1e-25 117.9 67 86.6
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 4.1e-25 117.9 85 71.8
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 7.1e-25 117.1 85 71.8
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.2e-24 116.3 72 77.8
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 2.7e-24 115.2 84 69.0
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 1.3e-23 112.8 66 84.8
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.3e-23 112.1 72 76.4
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 3.0e-23 111.7 81 70.4
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 1.6e-21 105.9 85 65.9
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 2.1e-21 105.5 59 88.1
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 2.8e-21 105.1 67 76.1
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 6.2e-21 104.0 67 76.1
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 6.2e-21 104.0 79 68.4
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.4e-20 102.8 59 84.7
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.4e-20 102.1 74 74.3
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 2.4e-20 102.1 59 84.7
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 3.1e-20 101.7 79 70.9
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.1e-20 101.7 76 72.4
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 3.1e-20 101.7 74 70.3
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 2.0e-19 99.0 80 62.5
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 5.8e-19 97.4 55 85.5
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 1.7e-18 95.9 79 67.1
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 3.2e-17 91.7 82 57.3
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.1e-14 83.2 59 72.9
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 4.3e-14 81.3 85 54.1
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 9.6e-14 80.1 52 73.1
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.6e-13 79.3 54 68.5
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 2.1e-13 79.0 83 51.8
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 4.0e-12 74.7 84 56.0
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 6.9e-12 73.9 83 48.2
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 8.4e-10 67.0 55 67.3
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 7.1e-09 63.9 64 46.9
Hma1.2p1_0735F.1_g210440 Hydrangea macrophylla HOM05D003704 ORTHO05D005892 7.1e-09 63.9 38 92.1
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 1.0e-07 60.1 38 76.3


User provided reference genes

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