Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0868F.1_g230520 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 4.8e-48 194.1 96 100.0
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 2.5e-20 102.1 152 46.1
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 1.7e-16 89.4 153 40.5
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 2.2e-16 89.0 150 43.3
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 4.9e-16 87.8 153 41.8
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 3.2e-15 85.1 156 39.1
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 1.7e-13 79.3 145 41.4
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.7e-13 79.3 151 37.1
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 6.6e-13 77.4 154 36.4
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 8.6e-13 77.0 151 38.4
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 1.1e-12 76.6 154 37.0
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.5e-12 76.3 152 37.5
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 1.9e-12 75.9 150 35.3
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 5.6e-12 74.3 157 36.3
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 7.3e-12 73.9 152 37.5
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 9.6e-12 73.6 152 37.5
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 2.1e-11 72.4 148 35.8
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 2.8e-11 72.0 149 35.6
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 4.7e-11 71.2 150 32.7
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 1.1e-10 70.1 151 32.5
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 1.1e-10 70.1 152 34.9
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 1.8e-10 69.3 156 35.3
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 2.4e-10 68.9 151 32.5
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 2.4e-10 68.9 192 31.2
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 3.1e-10 68.6 150 32.0
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 3.1e-10 68.6 152 34.9
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 3.1e-10 68.6 150 32.7
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 5.2e-10 67.8 145 33.8
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 6.8e-10 67.4 152 34.9
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 1.2e-09 66.6 142 33.8
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 1.5e-09 66.2 154 35.1
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 1.5e-09 66.2 154 35.1
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 2.0e-09 65.9 135 33.3
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 2.0e-09 65.9 151 33.8
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 3.4e-09 65.1 149 31.5
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 9.9e-09 63.5 152 32.2
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 1.7e-08 62.8 149 30.9
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 1.7e-08 62.8 149 30.9
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 4.9e-08 61.2 146 32.2
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 8.4e-08 60.5 153 34.0
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 8.4e-08 60.5 150 30.7
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 1.1e-07 60.1 41 65.9
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 1.4e-07 59.7 100 43.0
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 1.4e-07 59.7 98 41.8
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 1.9e-07 59.3 150 29.3
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 1.9e-07 59.3 150 32.0
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 2.4e-07 58.9 151 29.8
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 2.4e-07 58.9 152 32.2
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 3.2e-07 58.5 145 29.7
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 4.2e-07 58.2 149 33.6
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 7.1e-07 57.4 155 33.5
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 7.1e-07 57.4 139 34.5
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 7.1e-07 57.4 150 33.3
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 9.3e-07 57.0 151 32.5
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 2.1e-06 55.8 151 29.8
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 4.6e-06 54.7 57 59.6
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 6.0e-06 54.3 152 30.9
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 7.8e-06 53.9 65 50.8


User provided reference genes

Program Settings