Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0868F.1_g230500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-72 275.4 130 100.0
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-56 223.0 125 84.8
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-51 204.1 118 81.4
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-40 168.3 89 87.6
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.8e-33 144.1 70 91.4
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-31 137.5 69 88.4
Hma1.2p1_0722F.1_g208760 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.2e-30 134.4 66 89.4
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-28 130.2 79 75.9
Hma1.2p1_1549F.1_g290080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-25 117.9 109 54.1
Hma1.2p1_2309F.1_g319500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-23 113.2 131 48.1
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-23 111.7 115 51.3
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.5e-23 110.5 119 48.7
Hma1.2p1_0183F.1_g081030 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-22 109.8 119 51.3
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-22 109.4 107 53.3
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-22 107.5 126 47.6
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-21 105.9 124 50.0
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-21 105.5 124 47.6
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-21 105.5 119 51.3
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-20 102.8 130 46.2
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.6e-20 102.4 124 47.6
Hma1.2p1_0270F.1_g108600 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.4e-20 101.7 130 41.5
Hma1.2p1_1551F.1_g290170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.4e-20 101.7 131 44.3
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.9e-20 100.5 124 47.6
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-20 100.5 124 47.6
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.9e-20 100.5 104 51.9
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.8e-19 98.6 124 46.8
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-19 97.8 124 46.8
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-19 97.8 124 46.8
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-19 97.8 124 46.8
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-19 97.8 124 46.8
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-19 97.8 124 46.8
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-19 97.8 124 46.8
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-19 97.8 124 46.8
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-18 96.7 124 46.8
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.4e-18 96.7 124 46.8
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-18 96.7 114 47.4
Hma1.2p1_0026F.1_g016410 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-18 96.7 55 87.3
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-18 94.7 124 46.0
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.4e-18 94.7 103 46.6
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.1e-18 94.4 121 46.3
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.1e-18 94.4 121 46.3
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.1e-18 94.4 121 46.3
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.2e-18 94.0 109 48.6
SHI23105 Sapria himalayana HOM05D000002 ORTHO05D000047 2.1e-17 92.8 119 45.4
Hma1.2p1_0172F.1_g076310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-16 90.5 64 73.4
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-16 89.4 121 43.8
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-16 89.4 116 45.7
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-16 88.6 124 46.0
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-16 88.6 66 62.1
CSS0029966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.7e-16 87.4 111 45.0
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-16 87.4 104 47.1
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-15 85.5 82 54.9
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-15 85.1 82 54.9
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-15 85.1 82 54.9
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-15 85.1 82 54.9
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-15 85.1 82 54.9
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.6e-15 84.0 82 54.9
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-14 82.8 70 55.7
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 2.8e-14 82.4 72 58.3
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-14 82.0 82 53.7
Cpa.g.sc3.386 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-13 80.5 61 55.7
Hma1.2p1_1694F.1_g298020 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-13 80.5 60 61.7
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-13 79.7 70 54.3
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.0e-13 77.4 95 43.2
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 9.0e-13 77.4 129 35.7
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 3.4e-12 75.5 110 36.4
CANSAT54G2576 Cannabis sativa HOM05D000002 ORTHO05D000047 5.8e-12 74.7 110 36.4
Oeu052091.1 Olea europaea HOM05D000002 ORTHO05D000001 5.8e-12 74.7 75 48.0
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-12 74.3 102 37.3
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 1.3e-11 73.6 73 50.7
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.7e-11 73.2 130 36.2
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-11 72.8 76 39.5
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 3.8e-11 72.0 111 39.6
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.8e-11 72.0 129 34.1
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.1e-10 70.5 129 37.2
Hma1.2p1_0077F.1_g039800 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.5 60 53.3
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.5 70 45.7
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.5 70 45.7
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.5 70 45.7
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.5 70 45.7
Hma1.2p1_0062F.1_g034230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-10 70.1 80 41.2
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-10 70.1 66 56.1
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 4.2e-10 68.6 49 55.1
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-10 68.2 97 40.2
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.3e-10 67.4 111 38.7
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-10 67.4 95 38.9
SHI26944 Sapria himalayana HOM05D000002 ORTHO05D000047 9.3e-10 67.4 52 61.5
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-09 67.0 97 39.2
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-09 67.0 97 40.2
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-09 67.0 97 39.2
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-09 66.2 97 39.2
Atru.chr3.1979 Acer truncatum HOM05D000002 ORTHO05D000047 2.7e-09 65.9 75 44.0
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-09 65.9 83 41.0
SHI20908 Sapria himalayana HOM05D000023 ORTHO05D000014 3.5e-09 65.5 47 63.8
Atru.chr3.1554 Acer truncatum HOM05D000002 ORTHO05D000047 4.6e-09 65.1 101 35.6
CiPaw.01G278500 Carya illinoinensis HOM05D000002 ORTHO05D000001 4.6e-09 65.1 87 39.1
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-09 64.7 60 51.7
Hma1.2p1_0378F.1_g139783 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-08 63.9 70 44.3
Hma1.2p1_0668F.1_g199820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-08 63.9 70 44.3
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-08 63.5 85 38.8
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.3e-08 63.5 70 44.3
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-08 62.8 56 51.8
Hma1.2p1_0316F.1_g123090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-08 62.8 107 31.8
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-08 62.4 126 32.5
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 3.9e-08 62.0 62 50.0
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 3.9e-08 62.0 86 39.5
Cpa.g.sc12.143 Carica papaya HOM05D000002 ORTHO05D000047 6.6e-08 61.2 62 48.4
SHI14617 Sapria himalayana HOM05D000002 ORTHO05D000047 6.6e-08 61.2 79 39.2
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 1.1e-07 60.5 88 39.8
Hma1.2p1_1821F.1_g304210 Hydrangea macrophylla HOM05D000398 ORTHO05D002677 1.1e-07 60.5 86 40.7
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-07 60.1 102 34.3
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 59.3 60 41.7
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-07 58.9 94 35.1
Ca_02873_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 3.3e-07 58.9 69 40.6
Hma1.2p1_0528F.1_g173080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-07 58.9 59 52.5
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-07 58.9 60 41.7
Cpa.g.sc133.6 Carica papaya HOM05D000002 ORTHO05D000047 7.3e-07 57.8 70 44.3
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 1.3e-06 57.0 55 50.9
Hma1.2p1_2334F.1_g320160 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-06 57.0 93 39.8
Cpa.g.sc176.9 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-06 56.6 31 64.5
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-06 56.6 62 46.8
Oeu044270.1 Olea europaea HOM05D000002 ORTHO05D000047 1.6e-06 56.6 42 54.8
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 2.1e-06 56.2 131 30.5
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-06 55.5 55 47.3
Cpa.g.sc59.53 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-06 55.5 62 43.5
Hma1.2p1_0734F.1_g210330 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.8e-06 55.1 87 37.9
Nn1g06938 Nelumbo nucifera HOM05D000002 ORTHO05D000047 6.2e-06 54.7 72 37.5
Hma1.2p1_0020F.1_g014090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-06 54.3 40 62.5


User provided reference genes

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