Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 4.3e-31 137.1 59 100.0
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 5.3e-29 130.2 59 93.2
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 3.4e-28 127.5 59 91.5
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.7e-27 125.2 59 91.5
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 2.2e-27 124.8 59 91.5
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.9e-27 124.4 57 91.2
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.9e-27 124.4 58 87.9
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 2.9e-27 124.4 57 89.5
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.9e-27 123.6 59 86.4
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 6.5e-27 123.2 57 89.5
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 8.4e-27 122.9 59 89.8
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.1e-26 122.5 59 89.8
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.1e-26 122.5 59 89.8
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.1e-26 122.5 57 87.7
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.4e-26 122.1 58 82.8
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.9e-26 121.7 54 96.3
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 2.5e-26 121.3 59 88.1
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 2.5e-26 121.3 55 92.7
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 2.5e-26 121.3 55 92.7
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.5e-26 121.3 59 88.1
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.5e-26 121.3 59 88.1
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.5e-26 121.3 59 88.1
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 2.5e-26 121.3 55 92.7
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 2.5e-26 121.3 57 87.7
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.5e-26 121.3 57 87.7
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 3.2e-26 120.9 59 86.4
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 3.2e-26 120.9 55 90.9
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 3.2e-26 120.9 55 90.9
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 3.2e-26 120.9 55 90.9
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 4.2e-26 120.6 59 89.8
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.2e-26 120.6 59 88.1
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 7.1e-26 119.8 54 92.6
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 7.1e-26 119.8 53 96.2
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 7.1e-26 119.8 56 89.3
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 9.3e-26 119.4 54 94.4
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 9.3e-26 119.4 53 94.3
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 1.2e-25 119.0 59 86.4
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-25 119.0 58 87.9
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-25 119.0 58 87.9
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.2e-25 119.0 59 84.7
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.6e-25 118.6 52 96.2
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.6e-25 118.6 53 94.3
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.6e-25 118.6 52 94.2
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.1e-25 118.2 51 98.0
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 2.1e-25 118.2 54 92.6
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 2.7e-25 117.9 55 85.5
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 4.6e-25 117.1 54 90.7
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 4.6e-25 117.1 51 98.0
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 4.6e-25 117.1 58 84.5
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 6.0e-25 116.7 57 82.5
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 7.9e-25 116.3 56 83.9
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 7.9e-25 116.3 51 94.1
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.3e-24 115.5 54 88.9
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 1.3e-24 115.5 54 92.6
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.3e-24 115.5 54 92.6
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.3e-24 115.5 54 92.6
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 1.3e-24 115.5 57 87.7
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.8e-24 115.2 51 94.1
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 1.8e-24 115.2 55 85.5
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 1.8e-24 115.2 50 96.0
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.8e-24 115.2 54 88.9
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 2.3e-24 114.8 49 98.0
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 3.0e-24 114.4 51 92.2
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 3.9e-24 114.0 52 92.3
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 3.9e-24 114.0 59 84.7
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 5.1e-24 113.6 58 82.8
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 5.1e-24 113.6 51 92.2
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 6.7e-24 113.2 50 94.0
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 6.7e-24 113.2 50 94.0
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 6.7e-24 113.2 52 86.5
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 6.7e-24 113.2 52 86.5
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 8.7e-24 112.8 48 97.9
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 8.7e-24 112.8 55 85.5
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 1.1e-23 112.5 50 94.0
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 1.1e-23 112.5 50 94.0
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 1.1e-23 112.5 50 94.0
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 1.1e-23 112.5 50 94.0
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 1.1e-23 112.5 50 94.0
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.1e-23 112.5 54 90.7
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.1e-23 112.5 50 94.0
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.5e-23 112.1 51 90.2
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 2.5e-23 111.3 51 88.2
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 2.5e-23 111.3 52 88.5
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 2.5e-23 111.3 51 90.2
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 3.3e-23 110.9 54 85.2
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 3.3e-23 110.9 49 93.9
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.3e-23 110.9 55 83.6
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 3.3e-23 110.9 56 80.4
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 4.3e-23 110.5 49 91.8
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 4.3e-23 110.5 49 91.8
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 4.3e-23 110.5 49 91.8
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 4.3e-23 110.5 52 86.5
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 7.4e-23 109.8 49 91.8
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 9.7e-23 109.4 50 90.0
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 2.2e-22 108.2 48 95.8
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 2.8e-22 107.8 49 89.8
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 6.3e-22 106.7 50 82.0
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.1e-21 105.9 52 84.6
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 2.4e-21 104.8 57 73.7
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 2.4e-21 104.8 50 86.0
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 6.9e-21 103.2 51 80.4
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 6.9e-21 103.2 49 85.7
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 6.9e-21 103.2 46 87.0
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.2e-20 102.4 49 83.7
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 4.5e-20 100.5 55 76.4
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 4.5e-20 100.5 54 72.2
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 5.9e-20 100.1 50 78.0
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 2.2e-19 98.2 48 79.2
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 2.9e-19 97.8 50 80.0
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 5.0e-19 97.1 54 81.5
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.1e-18 95.9 57 71.9
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 3.2e-18 94.4 49 73.5
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 9.4e-18 92.8 46 80.4
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 1.4e-16 89.0 53 67.9
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 8.8e-16 86.3 56 62.5
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 1.1e-15 85.9 49 65.3


User provided reference genes

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