Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 9.3e-127 456.8 223 100.0
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 6.8e-61 238.0 202 59.9
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.0e-57 226.5 202 58.9
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 3.5e-57 225.7 224 58.9
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 4.6e-57 225.3 202 57.9
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 4.6e-57 225.3 202 57.9
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 4.7e-54 215.3 204 58.3
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 8.1e-54 214.5 208 57.2
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.1e-53 214.2 205 58.5
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 3.1e-53 212.6 219 58.4
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 4.0e-53 212.2 210 58.1
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.2e-51 206.5 203 56.7
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 4.9e-51 205.3 205 54.6
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 6.4e-51 204.9 206 53.9
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.4e-50 203.8 221 53.4
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.4e-50 203.0 221 52.9
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 2.4e-50 203.0 221 53.8
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.6e-49 200.3 208 53.4
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 7.8e-49 198.0 206 53.4
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.3e-48 197.2 220 52.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 3.0e-48 196.1 218 52.8
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 3.9e-48 195.7 206 53.4
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 3.9e-48 195.7 205 53.2
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 6.6e-48 194.9 207 53.6
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.1e-47 194.1 210 53.8
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.1e-47 194.1 217 53.9
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 2.5e-47 193.0 206 52.4
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.3e-47 192.6 210 52.9
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.6e-47 191.8 210 52.9
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 5.6e-47 191.8 210 54.3
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 7.3e-47 191.4 199 52.8
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.2e-46 190.7 200 50.0
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 2.1e-46 189.9 217 53.5
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 1.1e-45 187.6 203 52.2
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 1.1e-45 187.6 203 52.2
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.0e-45 185.7 200 49.0
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 5.2e-45 185.3 213 51.6
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.5e-44 183.7 203 52.7
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 1.5e-44 183.7 204 54.9
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.5e-44 183.7 214 53.7
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.5e-44 183.7 202 49.5
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 2.0e-44 183.3 203 52.2
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 2.6e-44 183.0 205 52.7
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.4e-44 182.2 211 54.0
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 4.4e-44 182.2 198 49.5
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 4.9e-43 178.7 208 49.5
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 8.4e-43 177.9 210 51.9
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.4e-42 177.2 210 51.4
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 2.4e-42 176.4 199 50.3
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 4.1e-42 175.6 202 47.5
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 7.1e-42 174.9 202 48.0
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 7.1e-42 174.9 200 51.5
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 7.1e-42 174.9 213 51.2
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 9.2e-42 174.5 201 50.7
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.2e-41 174.1 204 49.5
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.6e-41 173.7 206 46.6
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 3.5e-41 172.6 203 50.2
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 6.0e-41 171.8 215 49.3
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 3.9e-40 169.1 218 49.1
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 5.1e-40 168.7 160 58.1
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 6.6e-40 168.3 199 46.2
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 1.1e-39 167.5 213 46.9
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.5e-39 167.2 202 47.5
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 9.6e-39 164.5 221 45.7
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.6e-38 163.7 231 45.5
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.6e-38 163.7 199 46.2
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 2.1e-38 163.3 205 49.8
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 2.8e-38 162.9 202 47.0
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 3.6e-38 162.5 201 48.3
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 6.2e-38 161.8 225 44.4
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 8.1e-38 161.4 203 49.3
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 8.1e-38 161.4 194 49.0
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.8e-37 160.2 201 46.8
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 3.4e-36 156.0 212 45.3
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 7.6e-36 154.8 205 46.3
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 1.3e-35 154.1 198 47.5
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.7e-35 153.7 201 44.8
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.9e-34 150.2 218 42.2
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.4e-34 149.8 211 44.5
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 2.4e-34 149.8 212 42.5
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 7.1e-34 148.3 201 45.3
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 9.3e-34 147.9 198 48.0
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 6.0e-33 145.2 202 43.6
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 7.8e-33 144.8 200 43.5
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.0e-32 144.4 132 56.1
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 6.6e-32 141.7 205 44.4
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 6.6e-32 141.7 167 46.1
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.1e-31 141.0 202 43.1
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 1.6e-30 137.1 147 49.7
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 8.1e-30 134.8 208 37.5
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.5e-28 130.6 183 44.8
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.0e-28 130.2 173 53.2
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 2.0e-28 130.2 193 39.9
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 5.8e-28 128.6 193 39.4
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 5.8e-28 128.6 193 38.3
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 5.8e-28 128.6 193 38.3
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 2.9e-27 126.3 222 39.6
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 1.1e-26 124.4 193 37.8
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 1.9e-26 123.6 193 38.3
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.9e-26 123.6 210 42.9
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 4.2e-26 122.5 192 39.6
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 7.1e-26 121.7 202 41.1
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 7.1e-26 121.7 195 39.5
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 2.1e-25 120.2 210 40.0
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 7.9e-25 118.2 195 37.9
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.8e-24 117.1 195 36.9
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.3e-24 116.7 212 40.1
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.5e-23 114.0 194 37.1
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 5.6e-23 112.1 156 43.6
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 9.6e-23 111.3 308 30.8
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 8.1e-22 108.2 213 38.0
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.4e-21 107.5 195 34.4
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 9.3e-18 94.7 153 44.4
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 2.1e-17 93.6 209 34.0
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 2.1e-17 93.6 209 34.0
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 2.1e-14 83.6 108 50.0
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 5.8e-12 75.5 160 36.2
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.1e-10 71.2 165 31.5
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.2e-09 67.8 166 31.3
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 1.2e-09 67.8 110 40.0
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 5.1e-08 62.4 220 25.9
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.5e-07 60.8 77 45.5
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.3e-06 57.8 132 34.1


User provided reference genes

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