Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0717F.1_g208180 Hydrangea macrophylla HOM05D018505 ORTHO05D228097 4.2e-75 284.6 147 100.0
Hma1.2p1_1838F.1_g304860 Hydrangea macrophylla HOM05D018505 ORTHO05D228528 5.5e-35 151.4 81 98.8
Hma1.2p1_1359F.1_g278070 Hydrangea macrophylla HOM05D018505 ORTHO05D228162 2.8e-23 112.5 64 93.8
Hma1.2p1_0210F.1_g089750 Hydrangea macrophylla HOM05D001811 ORTHO05D228137 2.3e-17 92.8 108 56.5
Hma1.2p1_2198F.1_g316920 Hydrangea macrophylla HOM05D001811 ORTHO05D001738 6.8e-17 91.3 58 79.3
Hma1.2p1_1187F.1_g265150 Hydrangea macrophylla HOM05D001811 ORTHO05D001738 9.8e-16 87.4 58 75.9
Dinv22672 Davidia involucrata HOM05D001811 ORTHO05D001738 4.9e-15 85.1 59 71.2
Glyma.08G362400 Glycine max HOM05D001811 ORTHO05D001738 1.8e-14 83.2 61 68.9
vmacro00575 Vaccinium macrocarpon HOM05D001811 ORTHO05D001738 2.0e-13 79.7 58 70.7
Glyma.18G299500 Glycine max HOM05D001811 ORTHO05D001738 2.7e-13 79.3 58 69.0
CARHR138230 Cardamine hirsuta HOM05D001811 ORTHO05D001738 3.8e-12 75.5 55 76.4
Actinidia35897 Actinidia chinensis HOM05D001811 ORTHO05D001738 5.0e-12 75.1 48 79.2
arahy.Tifrunner.gnm1.ann1.UP2C0E Arachis hypogaea HOM05D001811 ORTHO05D001738 5.0e-12 75.1 59 62.7
arahy.Tifrunner.gnm1.ann1.VBT4RZ Arachis hypogaea HOM05D001811 ORTHO05D001738 6.6e-12 74.7 61 62.3
RcHm_v2.0_Chr4g0408771 Rosa chinensis HOM05D001811 ORTHO05D001738 6.6e-12 74.7 61 68.9
CiPaw.01G105300 Carya illinoinensis HOM05D001811 ORTHO05D001738 8.6e-12 74.3 52 71.2
COL.COLO4_24360 Corchorus olitorius HOM05D001811 ORTHO05D001738 8.6e-12 74.3 55 70.9
CsaV3_4G003710 Cucumis sativus L. HOM05D001811 ORTHO05D001738 8.6e-12 74.3 49 77.6
THA.LOC104802295 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 8.6e-12 74.3 62 66.1
CiPaw.02G057100 Carya illinoinensis HOM05D001811 ORTHO05D001738 1.5e-11 73.6 58 62.1
AT3G59290 Arabidopsis thaliana HOM05D001811 ORTHO05D001738 1.9e-11 73.2 58 70.7
MELO3C017683.2 Cucumis melo HOM05D001811 ORTHO05D001738 1.9e-11 73.2 49 75.5
Thhalv10001304m.g Eutrema salsugineum HOM05D001811 ORTHO05D001738 1.9e-11 73.2 58 70.7
BcaC01g05253 Brassica carinata HOM05D001811 ORTHO05D001738 2.5e-11 72.8 58 70.7
BolC3t15229H Brassica oleracea HOM05D001811 ORTHO05D001738 2.5e-11 72.8 58 70.7
Gohir.D10G131300 Gossypium hirsutum HOM05D001811 ORTHO05D001738 2.5e-11 72.8 55 70.9
Gorai.011G144900 Gossypium raimondii HOM05D001811 ORTHO05D001738 2.5e-11 72.8 55 70.9
QL10p046375 Quercus lobata HOM05D001811 ORTHO05D001738 2.5e-11 72.8 51 70.6
arahy.Tifrunner.gnm1.ann1.EJ828S Arachis hypogaea HOM05D001811 ORTHO05D001738 3.3e-11 72.4 61 62.3
arahy.Tifrunner.gnm1.ann1.ET71BL Arachis hypogaea HOM05D001811 ORTHO05D001738 3.3e-11 72.4 61 62.3
Hma1.2p1_0903F.1_g234930 Hydrangea macrophylla HOM05D018505 ORTHO05D228595 3.3e-11 72.4 41 97.6
BcaB01g03407 Brassica carinata HOM05D001811 ORTHO05D001738 5.6e-11 71.6 55 72.7
A03p24080 Brassica napus HOM05D001811 ORTHO05D001738 5.6e-11 71.6 55 72.7
C03p28670 Brassica napus HOM05D001811 ORTHO05D001738 5.6e-11 71.6 55 72.7
BraA03t11618Z Brassica rapa HOM05D001811 ORTHO05D001738 5.6e-11 71.6 55 72.7
AL4G41830 Arabidopsis lyrata HOM05D001811 ORTHO05D001738 7.3e-11 71.2 55 72.7
THA.LOC104803545 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 7.3e-11 71.2 62 66.1
Potri.014G151300 Populus trichocarpa HOM05D001811 ORTHO05D001738 9.5e-11 70.9 57 64.9
Actinidia17217 Actinidia chinensis HOM05D001811 ORTHO05D001738 1.2e-10 70.5 48 75.0
CSS0012265 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 1.2e-10 70.5 49 69.4
MD00G1184300 Malus domestica HOM05D001811 ORTHO05D001738 1.2e-10 70.5 64 59.4
Sp4g25290 Schrenkiella parvula HOM05D001811 ORTHO05D001738 1.2e-10 70.5 55 69.1
Aa31LG1G24970 Aethionema arabicum HOM05D001811 ORTHO05D001738 1.6e-10 70.1 57 68.4
Lalb_Chr10g0091091 Lupinus albus HOM05D001811 ORTHO05D001738 1.6e-10 70.1 57 66.7
CARHR169670 Cardamine hirsuta HOM05D001811 ORTHO05D001738 2.8e-10 69.3 58 69.0
Manes.04G050100 Manihot esculenta HOM05D001811 ORTHO05D001738 2.8e-10 69.3 55 69.1
A04p32480 Brassica napus HOM05D001811 ORTHO05D001738 3.6e-10 68.9 55 69.1
C04p70180 Brassica napus HOM05D001811 ORTHO05D001738 3.6e-10 68.9 55 69.1
BolC4t28522H Brassica oleracea HOM05D001811 ORTHO05D001738 3.6e-10 68.9 55 69.1
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 3.6e-10 68.9 55 69.1
Carub.0004s2564 Capsella rubella HOM05D001811 ORTHO05D001738 3.6e-10 68.9 54 72.2
ClCG07G016600 Citrullus lanatus HOM05D001811 ORTHO05D001738 3.6e-10 68.9 46 73.9
MD04G1031100 Malus domestica HOM05D001811 ORTHO05D001738 3.6e-10 68.9 66 59.1
C04p04260 Brassica napus HOM05D001811 ORTHO05D001738 6.1e-10 68.2 55 67.3
BolC4t22062H Brassica oleracea HOM05D001811 ORTHO05D001738 6.1e-10 68.2 55 67.3
SalBow6G5173 Salvia bowleyana HOM05D001811 ORTHO05D001738 1.0e-09 67.4 49 71.4
Sed0006490 Sechium edule HOM05D001811 ORTHO05D001738 1.0e-09 67.4 62 59.7
Sed0014185 Sechium edule HOM05D001811 ORTHO05D001738 1.0e-09 67.4 48 75.0
AT2G43160 Arabidopsis thaliana HOM05D001811 ORTHO05D001738 1.4e-09 67.0 54 70.4
A05p03660 Brassica napus HOM05D001811 ORTHO05D001738 1.4e-09 67.0 55 67.3
BraA05t19351Z Brassica rapa HOM05D001811 ORTHO05D001738 1.4e-09 67.0 55 67.3
AL5G41170 Arabidopsis lyrata HOM05D001811 ORTHO05D001738 2.3e-09 66.2 58 65.5
CANSAT78G0485 Cannabis sativa HOM05D001811 ORTHO05D001738 2.3e-09 66.2 58 58.6
THA.LOC104825689 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 4.0e-09 65.5 50 68.0
Lalb_Chr17g0335661 Lupinus albus HOM05D001811 ORTHO05D001738 5.2e-09 65.1 44 72.7
Oeu061586.1 Olea europaea HOM05D001811 ORTHO05D001738 5.2e-09 65.1 66 57.6
Thecc.04G182300 Theobroma cacao HOM05D001811 ORTHO05D001738 5.2e-09 65.1 48 72.9
Gohir.A02G013600 Gossypium hirsutum HOM05D001811 ORTHO05D001738 6.8e-09 64.7 48 72.9
Sabra14G0115100 Salix brachista HOM05D001811 ORTHO05D001738 8.9e-09 64.3 63 57.1
Lalb_Chr21g0307671 Lupinus albus HOM05D001811 ORTHO05D001738 1.2e-08 63.9 63 58.7
Gohir.D02G014700 Gossypium hirsutum HOM05D001811 ORTHO05D001738 1.5e-08 63.5 48 70.8
Gorai.005G018100 Gossypium raimondii HOM05D001811 ORTHO05D001738 1.5e-08 63.5 48 70.8
Nn1g09742 Nelumbo nucifera HOM05D001811 ORTHO05D001738 2.0e-08 63.2 59 54.2
TWI63G0726 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 2.6e-08 62.8 49 69.4
Lj1g0011997 Lotus japonicus HOM05D001811 ORTHO05D001738 3.4e-08 62.4 38 78.9
GSVIVG01013538001 Vitis vinifera HOM05D000007 ORTHO05D001738 4.4e-08 62.0 52 59.6
Phvul.008G003100 Phaseolus vulgaris HOM05D001811 ORTHO05D001738 7.5e-08 61.2 58 55.2
Aa31LG10G13650 Aethionema arabicum HOM05D001811 ORTHO05D001738 1.3e-07 60.5 62 61.3
Oeu029565.1 Olea europaea HOM05D001811 ORTHO05D001738 3.7e-07 58.9 51 62.7
CAN.G710.57 Capsicum annuum HOM05D001811 ORTHO05D001738 6.4e-07 58.2 58 56.9
FAN22G1882 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.1e-06 57.4 66 51.5
Cc03_g11140 Coffea canephora HOM05D001811 ORTHO05D001738 1.4e-06 57.0 42 69.0
unitig_8.g3628 Utricularia gibba HOM05D001811 ORTHO05D001738 1.4e-06 57.0 51 62.7
TWI15G0854 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 1.9e-06 56.6 49 67.3
Atru.chr3.1643 Acer truncatum HOM05D001811 ORTHO05D001738 2.4e-06 56.2 47 63.8
AUR62042832 Chenopodium quinoa HOM05D001811 ORTHO05D001738 2.4e-06 56.2 50 58.0
Potri.002G231100 Populus trichocarpa HOM05D001811 ORTHO05D001738 2.4e-06 56.2 57 56.1
Duzib268G1190 Durio zibethinus HOM05D001811 ORTHO05D001738 3.2e-06 55.8 54 59.3
Nitab4.5_0000978g0110 Nicotiana tabacum HOM05D001811 ORTHO05D001738 3.2e-06 55.8 42 69.0
Oeu034283.1 Olea europaea HOM05D001811 ORTHO05D001738 3.2e-06 55.8 49 57.1
TAR633G1013 Trochodendron aralioides HOM05D001811 ORTHO05D001738 3.2e-06 55.8 49 57.1
Lalb_Chr04g0257281 Lupinus albus HOM05D001811 ORTHO05D001738 4.1e-06 55.5 57 52.6
VMungo1383G1407 Vigna mungo HOM05D001811 ORTHO05D001738 4.1e-06 55.5 58 51.7
FAN17G1507 Fragaria x ananassa HOM05D001811 ORTHO05D001738 5.4e-06 55.1 66 50.0
Nitab4.5_0002466g0030 Nicotiana tabacum HOM05D001811 ORTHO05D001738 7.0e-06 54.7 42 66.7
Rhsim09G0034800 Rhododendron simsii HOM05D001811 ORTHO05D001738 7.0e-06 54.7 58 55.2
Sabra02G0176300 Salix brachista HOM05D001811 ORTHO05D001738 7.0e-06 54.7 57 56.1
Aqoxy2G04086 Aquilegia oxysepala HOM05D001811 ORTHO05D001738 9.2e-06 54.3 39 69.2
CAN.G484.125 Capsicum annuum HOM05D001811 ORTHO05D001738 9.2e-06 54.3 41 70.7
Gohir.A10G135400 Gossypium hirsutum HOM05D001811 ORTHO05D001738 9.2e-06 54.3 54 53.7


User provided reference genes

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