Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 6.9e-75 283.9 143 100.0
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.1e-35 152.1 82 97.6
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.1e-35 152.1 82 97.6
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 2.5e-32 142.5 82 90.2
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 2.5e-32 142.5 82 90.2
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 2.5e-32 142.5 82 90.2
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 2.5e-32 142.5 82 90.2
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 2.5e-32 142.5 82 91.5
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 2.5e-32 142.5 82 91.5
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 2.5e-32 142.5 82 91.5
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 4.3e-32 141.7 79 94.9
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 7.3e-32 141.0 80 92.5
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 2.1e-31 139.4 82 91.5
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 2.3e-30 136.0 78 92.3
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 3.4e-29 132.1 97 75.3
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 7.5e-29 131.0 69 98.6
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 9.8e-29 130.6 71 94.4
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.3e-28 130.2 97 76.3
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 6.4e-28 127.9 70 94.3
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 8.3e-28 127.5 69 95.7
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.3e-28 127.5 80 86.2
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 8.3e-28 127.5 69 95.7
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 8.3e-28 127.5 69 95.7
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 1.4e-27 126.7 74 91.9
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 1.8e-27 126.3 69 95.7
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 2.4e-27 125.9 68 95.6
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 3.2e-27 125.6 71 93.0
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 5.4e-27 124.8 69 94.2
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 5.4e-27 124.8 69 94.2
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 5.4e-27 124.8 69 94.2
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 7.0e-27 124.4 69 94.2
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 1.6e-26 123.2 66 97.0
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 2.7e-26 122.5 64 98.4
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 6.0e-26 121.3 66 95.5
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 6.0e-26 121.3 63 98.4
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 1.0e-25 120.6 69 91.3
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 3.9e-25 118.6 60 100.0
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 5.0e-25 118.2 77 84.4
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 5.0e-25 118.2 67 91.0
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 6.6e-25 117.9 64 95.3
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.5e-24 116.7 66 90.9
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.9e-24 116.3 63 93.7
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 5.6e-24 114.8 69 88.4
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.6e-23 113.2 65 90.8
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 1.6e-23 113.2 64 92.2
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 2.8e-23 112.5 82 72.0
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 4.7e-23 111.7 64 92.2
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.7e-23 111.7 66 86.4
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 4.7e-23 111.7 74 81.1
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 1.2e-21 107.1 55 98.2
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 5.8e-21 104.8 55 96.4
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.9e-20 102.4 62 83.9
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 4.9e-20 101.7 53 96.2
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 1.2e-18 97.1 54 92.6
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 5.6e-16 88.2 54 85.2
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 2.0e-13 79.7 42 95.2
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 3.4e-13 79.0 56 75.0
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 7.5e-13 77.8 44 88.6
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 7.1e-11 71.2 54 72.2
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 1.6e-10 70.1 36 91.7
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 1.6e-10 70.1 47 74.5
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 4.6e-10 68.6 35 97.1
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 3.0e-09 65.9 32 96.9
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 3.0e-09 65.9 36 88.9
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 5.1e-09 65.1 36 91.7
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.6e-08 61.6 33 90.9
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 1.2e-07 60.5 38 78.9
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 8.1e-07 57.8 34 82.4
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 1.4e-06 57.0 31 87.1
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 5.2e-06 55.1 33 78.8


User provided reference genes

Program Settings