Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 1.5e-308 1062.0 514 100.0
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 5.2e-274 947.2 512 88.1
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 3.0e-261 904.8 515 83.5
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 8.7e-261 903.3 515 83.3
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 3.9e-253 877.9 509 81.3
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 7.6e-249 863.6 508 80.3
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 3.8e-248 861.3 517 81.2
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 5.5e-247 857.4 511 79.3
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 3.3e-244 848.2 509 78.6
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 5.8e-241 837.4 498 78.9
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 3.8e-240 834.7 509 77.2
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 6.5e-240 833.9 545 74.1
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 3.2e-239 831.6 510 76.3
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 4.6e-238 827.8 513 76.4
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.0e-237 826.6 509 76.8
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-237 826.2 505 77.4
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 6.7e-237 823.9 507 76.7
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 6.3e-235 817.4 509 76.4
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.4e-234 816.2 506 76.1
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 1.8e-234 815.8 509 75.0
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.8e-234 815.8 511 76.1
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.1e-234 815.1 482 77.4
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 5.3e-234 814.3 510 74.7
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 6.9e-234 813.9 510 75.7
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.2e-233 813.1 510 75.7
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 1.2e-233 813.1 505 76.0
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.0e-233 812.4 506 75.5
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.6e-233 812.0 496 75.2
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 4.5e-233 811.2 509 75.4
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.0e-232 810.1 513 74.7
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 1.0e-232 810.1 515 75.5
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.7e-232 809.3 481 78.0
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.8e-232 808.1 505 76.0
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 5.0e-232 807.7 483 77.4
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 8.5e-232 807.0 501 74.5
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 8.5e-232 807.0 514 74.5
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.1e-231 806.6 503 74.2
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.1e-231 806.6 511 75.7
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 1.1e-231 806.6 509 74.9
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.4e-231 806.2 505 76.0
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.9e-231 805.8 512 74.6
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 1.9e-231 805.8 494 75.5
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 2.5e-231 805.4 483 77.6
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 2.1e-230 802.4 453 83.0
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 4.6e-230 801.2 512 73.4
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 3.9e-229 798.1 516 73.6
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 5.1e-229 797.7 510 73.7
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 8.8e-229 797.0 507 74.4
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.1e-228 796.6 512 74.2
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 2.0e-228 795.8 512 73.4
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 5.7e-228 794.3 506 73.9
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.2e-227 792.3 510 73.3
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 8.2e-227 790.4 506 74.3
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.1e-226 790.0 475 77.7
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 5.3e-226 787.7 499 73.5
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 5.3e-226 787.7 510 74.3
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.2e-225 786.6 514 72.6
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 1.3e-224 783.1 503 73.4
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.1e-223 780.0 488 73.8
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 1.9e-223 779.2 471 77.5
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 2.5e-223 778.9 499 73.3
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 2.5e-223 778.9 505 71.9
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.5e-223 778.9 488 74.0
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 5.5e-223 777.7 515 72.2
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.6e-222 776.2 510 71.2
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 4.7e-222 774.6 504 70.6
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 4.4e-220 768.1 504 70.0
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.3e-219 766.5 472 76.5
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.7e-219 766.1 511 70.6
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-217 760.0 511 70.3
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 5.9e-217 757.7 482 73.7
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 7.7e-217 757.3 505 71.5
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 8.5e-216 753.8 506 69.2
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.2e-214 750.0 457 76.4
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 8.8e-213 743.8 477 71.5
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 4.4e-212 741.5 508 70.5
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.8e-211 738.8 459 75.4
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 1.6e-209 733.0 504 69.2
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.6e-209 733.0 507 68.6
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 2.6e-209 732.3 504 69.0
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.6e-209 732.3 485 69.5
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 1.0e-208 730.3 504 68.8
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 1.0e-208 730.3 504 69.0
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 1.0e-208 730.3 504 68.8
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 2.9e-208 728.8 498 68.3
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 7.2e-207 724.2 539 66.0
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 2.1e-206 722.6 523 65.8
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 2.7e-206 722.2 497 69.4
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 4.7e-206 721.5 496 69.4
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 2.0e-204 716.1 504 68.8
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.8e-202 709.5 504 66.1
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.7e-201 705.7 551 63.3
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 5.9e-201 704.5 515 65.0
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.3e-192 676.0 488 67.2
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.6e-182 643.3 499 64.5
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 2.0e-172 609.8 503 57.9
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 3.1e-165 585.9 377 73.5
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.2e-156 557.4 369 71.5
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.1e-154 550.8 343 75.5
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 2.3e-152 543.1 335 75.5
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 8.7e-144 514.6 359 66.6
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.3e-127 459.5 495 51.3
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.2e-122 443.0 306 68.0
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.6e-121 440.7 316 65.5
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 1.5e-98 364.4 230 68.7
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 9.4e-90 335.1 214 67.3
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 3.1e-77 293.5 183 73.2
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.6e-74 282.7 176 75.0
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 2.0e-63 247.7 142 79.6
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 1.6e-60 238.0 148 68.2
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 1.1e-24 119.0 104 60.6
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.6e-17 95.1 52 80.8
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 9.3e-13 79.3 79 51.9
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 9.3e-13 79.3 84 47.6


User provided reference genes

Program Settings