Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 6.7e-156 553.9 266 100.0
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 6.1e-117 424.5 264 75.0
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 8.0e-117 424.1 257 77.4
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 3.4e-115 418.7 264 75.8
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 2.2e-114 416.0 262 74.8
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.2e-112 410.2 257 76.7
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 6.5e-111 404.4 257 75.1
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 5.5e-110 401.4 258 72.5
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.8e-108 396.4 258 72.5
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 5.7e-107 391.3 263 73.0
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 1.3e-106 390.2 263 69.6
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.7e-106 389.8 264 69.7
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 2.2e-106 389.4 258 70.9
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 4.9e-106 388.3 264 70.8
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.4e-105 386.7 256 73.8
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.4e-105 386.7 257 72.8
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.8e-105 386.3 258 70.9
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 2.4e-105 386.0 258 71.3
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 3.1e-105 385.6 262 70.6
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 7.0e-105 384.4 257 72.4
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 7.0e-105 384.4 257 72.0
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 7.0e-105 384.4 258 72.1
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 7.8e-104 380.9 257 71.6
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 7.8e-104 380.9 257 70.8
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.0e-103 380.6 258 70.5
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.3e-103 380.2 264 70.5
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.7e-103 379.8 257 71.6
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 2.3e-103 379.4 255 72.2
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 2.3e-103 379.4 257 71.6
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 3.8e-103 378.6 257 72.0
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 8.6e-103 377.5 257 69.6
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.9e-102 376.3 264 67.8
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 3.3e-102 375.6 258 70.5
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 7.3e-102 374.4 259 70.3
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.6e-101 373.2 223 80.3
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 1.8e-100 369.8 257 69.6
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 1.8e-100 369.8 257 68.5
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 2.3e-100 369.4 258 67.1
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 2.3e-100 369.4 258 69.0
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 1.2e-99 367.1 262 67.9
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 9.8e-99 364.0 263 67.3
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-98 363.2 262 66.4
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.9e-98 362.5 262 66.4
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 3.7e-98 362.1 262 66.0
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.7e-98 362.1 262 66.0
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 4.9e-98 361.7 258 67.1
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.4e-97 359.4 258 68.6
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 3.2e-97 359.0 258 68.6
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 7.0e-97 357.8 258 67.1
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 2.0e-96 356.3 258 67.1
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 2.0e-96 356.3 300 60.3
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.0e-95 354.0 259 67.6
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 2.3e-95 352.8 257 65.4
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 1.5e-94 350.1 258 65.9
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 5.6e-94 348.2 260 66.2
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.2e-93 347.1 258 65.9
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 2.1e-93 346.3 258 65.1
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 2.3e-92 342.8 259 63.7
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 5.2e-92 341.7 259 64.1
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.2e-91 340.5 254 65.0
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 2.0e-91 339.7 259 63.7
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 1.7e-90 336.7 229 71.2
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 3.2e-89 332.4 256 64.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 3.2e-89 332.4 257 65.4
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 7.3e-86 321.2 254 61.4
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 2.8e-85 319.3 215 72.1
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 4.4e-83 312.0 260 59.6
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 8.3e-82 307.8 221 65.2
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 1.1e-81 307.4 258 60.5
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 8.6e-79 297.7 258 59.7
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 8.9e-76 287.7 228 60.5
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 7.6e-75 284.6 258 56.2
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 4.9e-74 282.0 232 59.1
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 4.7e-69 265.4 182 72.5
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 8.1e-69 264.6 183 68.9
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.2e-57 226.1 173 65.3
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.2e-57 226.1 173 65.3
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 2.4e-52 209.9 298 42.6
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 2.0e-51 206.8 132 72.0
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 1.3e-50 204.1 165 60.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 2.2e-50 203.4 185 56.8
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 2.2e-50 203.4 183 53.0
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.8e-47 193.7 126 73.0
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 1.8e-44 183.7 197 49.7
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 5.8e-43 178.7 131 66.4
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 1.1e-36 157.9 148 52.0
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.8e-36 157.1 108 69.4
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.3e-31 140.2 118 55.9
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.5e-30 136.7 105 61.0
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 7.4e-30 135.2 328 30.8
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.2e-29 133.7 328 30.8
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 3.0e-23 113.2 98 59.2
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 9.1e-20 101.7 92 54.3
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.8e-18 96.3 61 68.9
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.4e-17 94.4 59 67.8
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 1.4e-15 87.8 80 56.2
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 6.7e-15 85.5 113 42.5


User provided reference genes

Program Settings