Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.0e-56 223.0 103 100.0
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 1.2e-33 146.4 102 61.8
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 3.4e-31 138.3 99 63.6
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 2.2e-30 135.6 100 63.0
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 4.9e-30 134.4 99 61.6
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 2.4e-29 132.1 106 58.5
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 2.4e-29 132.1 76 71.1
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 3.2e-29 131.7 103 54.4
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.2e-28 129.8 89 58.4
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 1.6e-28 129.4 97 58.8
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 1.6e-28 129.4 102 56.9
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 4.6e-28 127.9 101 58.4
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 7.8e-28 127.1 102 56.9
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 7.8e-28 127.1 89 61.8
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 7.8e-28 127.1 89 61.8
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 2.3e-27 125.6 101 57.4
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 2.3e-27 125.6 71 67.6
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 6.6e-27 124.0 93 63.4
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 8.6e-27 123.6 103 59.2
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 1.1e-26 123.2 95 53.7
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 1.1e-26 123.2 89 59.6
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 1.5e-26 122.9 80 62.5
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 3.3e-26 121.7 87 58.6
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.3e-26 121.3 97 59.8
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 9.5e-26 120.2 100 53.0
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 9.5e-26 120.2 112 51.8
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 2.1e-25 119.0 104 57.7
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 2.8e-25 118.6 104 53.8
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 4.7e-25 117.9 112 50.9
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 6.2e-25 117.5 90 58.9
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 8.1e-25 117.1 114 50.9
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 1.1e-24 116.7 86 59.3
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 1.4e-24 116.3 106 50.9
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 3.1e-24 115.2 106 50.0
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 6.8e-24 114.0 90 56.7
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 2.0e-23 112.5 97 54.6
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 2.0e-23 112.5 102 54.9
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 5.8e-23 110.9 112 49.1
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.3e-22 109.8 102 50.0
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 1.7e-22 109.4 94 56.4
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 2.2e-22 109.0 95 51.6
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 2.2e-22 109.0 92 54.3
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 8.4e-22 107.1 102 49.0
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 6.0e-20 100.9 91 47.3
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 7.8e-20 100.5 73 58.9
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 3.9e-19 98.2 105 45.7
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 3.9e-19 98.2 105 45.7
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 5.1e-19 97.8 111 37.8
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 6.6e-19 97.4 84 48.8
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 6.6e-19 97.4 84 48.8
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 6.6e-19 97.4 84 48.8
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 6.6e-19 97.4 105 44.8
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 1.1e-18 96.7 80 51.2
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 2.5e-18 95.5 97 43.3
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 3.3e-18 95.1 84 47.6
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 3.3e-18 95.1 84 47.6
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 3.3e-18 95.1 88 50.0
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 3.3e-18 95.1 99 43.4
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 4.3e-18 94.7 83 47.0
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 2.1e-17 92.4 100 43.0
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 4.8e-17 91.3 108 41.7
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 8.1e-17 90.5 73 47.9
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.1e-16 90.1 98 38.8
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 1.8e-16 89.4 67 55.2
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 3.1e-16 88.6 99 42.4
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 3.1e-16 88.6 99 42.4
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 3.1e-16 88.6 99 42.4
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 3.1e-16 88.6 66 53.0
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 9.0e-16 87.0 83 44.6
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 2.0e-15 85.9 100 39.0
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 5.8e-15 84.3 86 46.5
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 9.9e-15 83.6 67 52.2
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 3.8e-14 81.6 96 42.7
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 8.4e-14 80.5 109 39.4
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 4.2e-13 78.2 65 44.6
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 3.5e-12 75.1 100 36.0
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 1.0e-11 73.6 99 35.4
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 1.0e-11 73.6 100 35.0
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 1.0e-11 73.6 100 35.0
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 1.3e-09 66.6 91 37.4
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 5.8e-07 57.8 49 46.9


User provided reference genes

Program Settings