Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0533F.1_g173670 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.1e-52 208.8 105 100.0
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.5e-21 105.5 131 50.4
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 2.0e-10 69.3 139 34.5
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.7e-09 65.1 150 33.3
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 1.8e-08 62.8 149 36.2
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.1e-08 62.0 147 33.3
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 5.4e-08 61.2 86 40.7
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 9.2e-08 60.5 82 42.7
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 9.2e-08 60.5 85 35.3
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 1.2e-07 60.1 144 35.4
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.2e-07 60.1 91 38.5
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 2.0e-07 59.3 61 42.6
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.9e-07 57.8 62 43.5
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 5.9e-07 57.8 75 38.7
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 7.7e-07 57.4 62 43.5
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 7.7e-07 57.4 66 36.4
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.0e-06 57.0 60 45.0
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.3e-06 56.6 68 44.1
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.3e-06 56.6 66 43.9
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 1.3e-06 56.6 67 44.8
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 1.7e-06 56.2 85 34.1
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 1.7e-06 56.2 62 41.9
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 2.3e-06 55.8 85 34.1
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 2.9e-06 55.5 59 42.4
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 3.8e-06 55.1 77 37.7
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.8e-06 55.1 61 42.6
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 3.8e-06 55.1 73 39.7
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 3.8e-06 55.1 75 37.3
Solyc08g080490.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 3.8e-06 55.1 64 40.6
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 3.8e-06 55.1 74 37.8
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.6e-06 54.3 60 45.0
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 6.6e-06 54.3 60 45.0
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 6.6e-06 54.3 154 29.9
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 8.6e-06 53.9 81 35.8
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 8.6e-06 53.9 68 42.6


User provided reference genes

Program Settings