Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0502F.1_g167890 Hydrangea macrophylla HOM05D011745 ORTHO05D012903 2.0e-98 362.5 185 100.0
Hma1.2p1_3050F.1_g332133 Hydrangea macrophylla HOM05D011745 ORTHO05D012903 2.0e-98 362.5 185 100.0
Hma1.2p1_0502F.1_g167910 Hydrangea macrophylla HOM05D011745 ORTHO05D012903 4.8e-60 235.0 218 63.8
Dinv16893 Davidia involucrata HOM05D011745 ORTHO05D012903 6.1e-47 191.4 200 57.0
Dinv34535 Davidia involucrata HOM05D011745 ORTHO05D012903 2.4e-43 179.5 218 53.2
Dinv16890 Davidia involucrata HOM05D011745 ORTHO05D012903 5.3e-43 178.3 214 50.9
Dinv16888 Davidia involucrata HOM05D011745 ORTHO05D012903 8.5e-41 171.0 190 52.6
CSS0047786 Camellia sinensis var. sinensis HOM05D011745 ORTHO05D012903 6.1e-39 164.9 222 45.9
Actinidia01030 Actinidia chinensis HOM05D011745 ORTHO05D012903 5.7e-37 158.3 208 48.1
Actinidia01029 Actinidia chinensis HOM05D011745 ORTHO05D012903 9.1e-35 151.0 208 46.6
CSS0018771 Camellia sinensis var. sinensis HOM05D011745 ORTHO05D012903 1.6e-23 113.6 109 55.0
CSS0049062 Camellia sinensis var. sinensis HOM05D011745 ORTHO05D012903 6.3e-20 101.7 113 52.2
Atru.chr1.886 Acer truncatum HOM05D011745 ORTHO05D012903 1.1e-19 100.9 223 34.1
Atru.chr1.875 Acer truncatum HOM05D011745 ORTHO05D012903 2.0e-18 96.7 223 33.2
TAR375G0010 Trochodendron aralioides HOM05D000501 ORTHO05D012903 1.3e-09 67.4 126 35.7
Manes.08G055100 Manihot esculenta HOM05D055292 ORTHO05D012903 5.5e-08 62.0 155 29.7
TAR375G1069 Trochodendron aralioides HOM05D000480 ORTHO05D000313 7.2e-08 61.6 74 43.2
CSS0042396 Camellia sinensis var. sinensis HOM05D011745 ORTHO05D012903 8.0e-07 58.2 54 59.3
Manes.08G055050 Manihot esculenta HOM05D055292 ORTHO05D012903 8.8e-06 54.7 83 39.8


User provided reference genes

Program Settings