Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 2.9e-108 395.2 191 100.0
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.9e-91 339.3 191 85.3
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.4e-83 313.2 191 75.4
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 4.3e-80 301.6 183 78.1
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.6e-79 299.7 185 75.7
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 3.1e-78 295.4 185 73.0
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 3.4e-77 292.0 187 75.4
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.3e-76 290.0 182 74.2
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 2.9e-76 288.9 185 73.0
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.6e-74 283.1 182 72.5
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.1e-74 282.7 178 73.6
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.7e-74 282.3 178 75.3
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 6.0e-74 281.2 190 70.0
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 7.8e-74 280.8 191 68.6
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.3e-73 280.0 186 72.0
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.7e-73 279.6 191 72.3
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 2.3e-73 279.3 177 72.9
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 6.6e-73 277.7 183 71.6
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 6.6e-73 277.7 216 64.4
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.1e-72 276.9 188 67.0
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.5e-72 276.6 186 71.5
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.9e-72 276.2 183 68.9
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 3.3e-72 275.4 188 69.7
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 4.3e-72 275.0 172 73.8
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.6e-71 273.1 179 72.6
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 2.8e-71 272.3 193 69.4
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 5.3e-70 268.1 169 72.8
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.9e-70 267.7 168 73.8
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 9.0e-70 267.3 169 72.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.5e-69 266.5 200 66.0
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 1.5e-69 266.5 175 72.0
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 2.0e-69 266.2 189 69.3
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 4.5e-69 265.0 180 68.3
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 5.8e-69 264.6 168 72.6
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 5.8e-69 264.6 168 73.2
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 9.9e-69 263.8 192 66.7
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.3e-68 263.5 177 69.5
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 2.2e-68 262.7 178 69.7
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 4.9e-68 261.5 181 71.8
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 4.9e-68 261.5 165 70.3
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 8.4e-68 260.8 187 65.8
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 1.1e-67 260.4 177 69.5
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.4e-67 260.0 173 71.1
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 3.2e-67 258.8 183 66.7
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 3.2e-67 258.8 173 69.9
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 3.2e-67 258.8 172 71.5
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 5.4e-67 258.1 169 70.4
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.7e-66 255.8 174 67.2
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 4.6e-66 255.0 169 73.4
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.8e-65 253.1 183 68.3
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 2.3e-65 252.7 256 51.6
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 3.0e-65 252.3 186 65.6
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.0e-65 252.3 180 67.8
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 3.9e-65 251.9 167 71.3
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 5.1e-65 251.5 167 71.3
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 5.1e-65 251.5 188 63.8
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.1e-64 250.4 181 65.2
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.1e-64 250.4 174 67.2
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.1e-64 250.4 185 68.6
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.5e-64 250.0 174 67.8
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 1.5e-64 250.0 167 70.7
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 1.9e-64 249.6 169 68.6
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.9e-64 249.6 181 68.0
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 3.3e-64 248.8 159 71.1
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 4.3e-64 248.4 173 67.6
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 4.3e-64 248.4 174 67.8
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 4.3e-64 248.4 161 68.9
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 5.6e-64 248.1 181 67.4
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 5.6e-64 248.1 189 64.0
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.6e-63 246.5 183 67.8
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 3.6e-63 245.4 174 68.4
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 3.6e-63 245.4 174 68.4
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 3.6e-63 245.4 174 68.4
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 6.2e-63 244.6 175 68.0
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 8.1e-63 244.2 175 68.0
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 3.1e-62 242.3 189 63.5
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 3.1e-62 242.3 189 63.5
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 5.3e-62 241.5 180 65.0
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.5e-61 240.0 179 63.7
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 4.5e-61 238.4 191 60.2
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.7e-60 236.5 174 62.1
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 2.4e-59 232.6 156 67.3
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.2e-58 230.3 156 66.7
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 2.1e-58 229.6 155 68.4
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.5e-56 222.6 139 77.7
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 7.1e-51 204.5 163 62.0
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 1.2e-50 203.8 133 72.9
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 3.5e-50 202.2 141 68.1
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.3e-49 199.5 187 55.1
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 3.0e-49 199.1 132 72.0
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 5.1e-49 198.4 156 60.3
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.7e-48 194.9 156 59.6
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.8e-47 192.6 120 74.2
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 3.7e-47 192.2 156 61.5
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 1.8e-46 189.9 181 54.1
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.3e-46 188.3 159 54.7
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 6.1e-42 174.9 157 54.1
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.7e-41 171.4 162 55.6
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.7e-36 156.8 119 61.3
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 3.8e-36 155.6 151 52.3
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 8.2e-31 137.9 188 45.2
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 3.8e-28 129.0 80 75.0
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 9.4e-27 124.4 81 65.4
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.1e-22 107.8 108 50.9
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 4.0e-17 92.4 145 37.2
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 1.4e-14 84.0 90 56.7
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.9e-12 76.3 47 70.2
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 1.0e-09 67.8 49 63.3
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.0e-09 66.2 45 64.4
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 6.3e-07 58.5 36 69.4


User provided reference genes

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